BAC Information

Click to search

BAC

Clone NameB6Ng01-031J08
Chromosome2 (Build37)
Map Location 87,076,490 - 87,077,648
singlet/doubletsinglet
Overlap geneLOC546767
Upstream geneOlfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1
Downstream geneOlfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031J08.bB6Ng01-031J08.g
ACCDH861154DH861155
length1,0621,128
definitionDH861154|Mus musculus domesticus DNA, BAC clone: B6Ng01-031J08, 5' end.DH861155|Mus musculus domesticus DNA, BAC clone: B6Ng01-031J08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctattcatgtggctatcttctttaggtttgttgaaagattacttt
cttgctttttcttgagtttagtttccctctttgttttcgagttttccctt
tattatcctttgaagtgctcgatttatattttataaatttggttttgtta
tggaataccttagtttctccatctatagtaattgataattttgttgggta
tagtagcctgggctggcatttgtgttctattaggatctggatgatatctg
cccaggatcttctggctttcatagtccctggggagaagtcagatgtaatt
ctgatatgtctgcctttatatgttacttgacctttttcccttactgcttt
caatattctttctttgatttgtgcatttttttgttctgattattatgtgt
caggaggaatttcttttctggtccagtctatttggagttctgtaggcttc
ttgtttgtaaatgggcatctctttctttaggttggggaagttttcttctc
taattttgttgaaggtatttaatggctctttaagttgtaaatcttccttc
tcatatatacctattatccatagctttggtcttttcattgtgtcctggat
ttcctggatgttttgttttaggatcattttgcattttctttgattgttgt
atcaatgttttctatgttatcttctgcacctgagattctctcttggatgt
gttatcctgtctttctctaaaggagttatttatttctgtcttaaagtcct
ccatcattagattcatatcttgcttttctgttgtgatggtgtatcaagga
cttgctatggtggaatagtttggttctgatgatgccaagtaatcttggtt
tctgttgcttcttttcctacgcttgcctcctgccatctaattatctgaac
tgtttgctgccctcgctatatctgtttggagcctgtctcctatatcctgg
gtgatcaggactcatcagtgtccagctttctctgtgattctgtgattctt
ggtcctgttaacctgagcttctgggggtgtcagagtcttggcagtcatct
tccaccgaaaac
gaattccttataaccccatgggacaaggaattgttgaatgtgctcttcgc
actctgaaaaattggctttcaaaaacaaaacaggggcagttatacccccc
aaaagtcaccaaaagtacatcttgcttttgtcttgttcgttttaaatttt
tttgccaaatggtgtgcatgggctgcacatgttaggagtcgtcgatggac
tgtagccgtctgtggtgcggagtgcggagcccagagcccatggagcaggt
gcagatgatcaatgtgcagtgcctgctggagaccgtggaatttttggagc
tcaggtagcgagagtgtgaacatggctatgtctcatgtttcccctccatg
ccgaacccctggctacagcacttgaagccccccacagaggttgagccggc
acagaaacatagcagtgggagcagcaacaccagcactgccaacagatcta
cacacaatgagttcaaaaagaaccgccaagctcacctgcgcctgtgttta
aaacgcttgaaagctctgatcccgctgggcccagactgcaccaggcacac
aagactcggtttgcccaacaaagccaaagcacacatcaagaaacgtgaag
aagcagagagccagcaccagctcaagaacttggaacgagagcagagattt
ttaaagcagcagctagatgcaagtgcctcaggagatggaatggatacgaa
tggacagcattagatcaaccatctcttcagatcgctcggattcagagtga
gaggagattgaagtggatgtggaaagcccagagttctcccatggagaagc
agacagtgtcagtaccaccagcatcagtgaccttgatgaccacaacagcc
tgcagagtgttgggagtgaggaggatactccagtaccagtgcaaactctc
ttcccatcatagaacccaacatgacctacaatgcaggcggagagctcact
agctagtcacacatctctcaaattgggttcatgatgcagtctcctcttaa
ctaaaactatacttgaacaaaggtcagaagaaatgtattaagcaatactt
ataaaagtgggggtagagctccttggtagacaatttcttatttgaagaaa
tcgtttaacagcagcgaaacatgcatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87076490_87077648
seq2: B6Ng01-031J08.g_68_1195

seq1  GAATTCCTTATAACCCCATGGGACAAGGAATTGTTGAATGTGCTCTTCGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATAACCCCATGGGACAAGGAATTGTTGAATGTGCTCTTCGC  50

seq1  ACTCTGAAAAATTGGCTTTCAAAAACAAAACAGGGGCAGTTATACCCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGAAAAATTGGCTTTCAAAAACAAAACAGGGGCAGTTATACCCCCC  100

seq1  AAAAGTCACCAAAAGTACATCTTGCTTTTGTCTTGTTCGTTTTAAATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCACCAAAAGTACATCTTGCTTTTGTCTTGTTCGTTTTAAATTTT  150

seq1  TTTGCCAAATGGTGTGCATGGGCTGCACATGTTAGGAGTCGTCGATGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAAATGGTGTGCATGGGCTGCACATGTTAGGAGTCGTCGATGGAC  200

seq1  TGTAGCCGTCTGTGGTGCGGAGTGCGGAGCCCAGAGCCCATGGAGCAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCGTCTGTGGTGCGGAGTGCGGAGCCCAGAGCCCATGGAGCAGGT  250

seq1  GCAGATGATCAATGTGCAGTGCCTGCTGGAGACCGTGGAATTTTTGGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGATCAATGTGCAGTGCCTGCTGGAGACCGTGGAATTTTTGGAGC  300

seq1  TCAGGTAGCGAGAGTGTGAACATGGCTATGTCTCATGTTTCCCCTCCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTAGCGAGAGTGTGAACATGGCTATGTCTCATGTTTCCCCTCCATG  350

seq1  CCGAACCCCTGGCTACAGCACTTGAAGCCCCCCACAGAGGTTGAGCCGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAACCCCTGGCTACAGCACTTGAAGCCCCCCACAGAGGTTGAGCCGGC  400

seq1  ACAGAAACATAGCAGTGGGAGCAGCAACACCAGCACTGCCAACAGATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACATAGCAGTGGGAGCAGCAACACCAGCACTGCCAACAGATCTA  450

seq1  CACACAATGAGTTCAAAAAGAACCGCCAAGCTCACCTGCGCCTGTGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAATGAGTTCAAAAAGAACCGCCAAGCTCACCTGCGCCTGTGTTTA  500

seq1  AAACGCTTGAAAGCTCTGATCCCGCTGGGCCCAGACTGCACCAGGCACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGCTTGAAAGCTCTGATCCCGCTGGGCCCAGACTGCACCAGGCACAC  550

seq1  AAGACTCGGTTTGCCCAACAAAGCCAAAGCACACATCAAGAAACGTGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCGGTTTGCCCAACAAAGCCAAAGCACACATCAAGAAACGTGAAG  600

seq1  AAGCAGAGAGCCAGCACCAGCTCAAGAACTTGGAACGAGAGCAGAGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGAGCCAGCACCAGCTCAAGAACTTGGAACGAGAGCAGAGATTT  650

seq1  TTAAAGCAGCAGCTAGATGCAAGTGCCTCAGGAGATGGAATGGATACGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCAGCAGCTAGATGCAAGTGCCTCAGGAGATGGAATGGATACGAA  700

seq1  TGGACAGCATTAGATCAACCATCTCTTCAGATCGCTCGGATTCAGAGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGCATTAGATCAACCATCTCTTCAGATCGCTCGGATTCAGAGTGA  750

seq1  GAGGAGATTGAAGTGGATGTGGAAAGCCCAGAGTTCTCCCATGGAGAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGATTGAAGTGGATGTGGAAAGCCCAGAGTTCTCCCATGGAGAAGC  800

seq1  AGACAGTGTCAGTACCACCAGCATCAGTGACCTTGATGACCACAACAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTGTCAGTACCACCAGCATCAGTGACCTTGATGACCACAACAGCC  850

seq1  TGCAGAGTGTTGGGAGTGAGGAGGATTACTCCAGTACCAGTGCCAAACTC  900
      ||||||||||||||||||||||||| |||||||||||||||| |||||||
seq2  TGCAGAGTGTTGGGAGTGAGGAGGA-TACTCCAGTACCAGTG-CAAACTC  898

seq1  TCCTTCCCATCATAGAACCCAACATGACCTAACAATGCAGGGCGGAGAGC  950
      | |||||||||||||||||||||||||||| |||||||| ||||||||||
seq2  T-CTTCCCATCATAGAACCCAACATGACCT-ACAATGCA-GGCGGAGAGC  945

seq1  TCACTAGGCCTAGTCAACACCATCTCTCAAATTGGGTTCATGATGCAGTC  1000
      |||||||  |||||| ||| ||||||||||||||||||||||||||||||
seq2  TCACTAG--CTAGTC-ACA-CATCTCTCAAATTGGGTTCATGATGCAGTC  991

seq1  TCCTCTTTAAAACTAAAAACTATACTTGAACAAAAGGGTCAGAAGACATG  1050
      |||||||   |||| |||||||||||||||||||  |||||||||| |||
seq2  TCCTCTT---AACT-AAAACTATACTTGAACAAA--GGTCAGAAGAAATG  1035

seq1  TATTTAAGCAAATACTTAATAAAAAGTGGGGTAGAGCCTCCCTGGTAGAA  1100
      || |||||| ||||||| ||||||   ||||||||| |||| |||||| |
seq2  TA-TTAAGC-AATACTT-ATAAAAGTGGGGGTAGAG-CTCCTTGGTAG-A  1080

seq1  CAAATATTCCTATATTTGGAAAGAATACAGTTTCTAACAGCAGCAGAAAC  1150
      ||   ||| || ||||||  ||||| |  |||  |||||||||| |||| 
seq2  CA---ATTTCT-TATTTG--AAGAA-ATCGTT--TAACAGCAGC-GAAA-  1119

seq1  CATGCATGC  1159
      |||||||||
seq2  CATGCATGC  1128