BAC Information

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BAC

Clone NameB6Ng01-032H08
Chromosome2 (Build37)
Map Location 159,237,451 - 159,238,514
singlet/doubletsinglet
Overlap genenone
Upstream geneB230339M05Rik, LOC628935, BC054059, LOC545481, Slc32a1, Actr5, Ppp1r16b, 2310007D09Rik, Dhx35, LOC100043891
Downstream geneLOC100043689, Gm826, Mafb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032H08.bB6Ng01-032H08.g
ACCDH861790DH861791
length1,062216
definitionDH861790|Mus musculus domesticus DNA, BAC clone: B6Ng01-032H08, 5' end.DH861791|Mus musculus domesticus DNA, BAC clone: B6Ng01-032H08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttccctgaatggaagaccagtcacaccccatctctctgtgtgac
ccctatgacctctcacgggcttcactgcctgatatcttcattcccctccc
ttctcagtctgccctaacctcctcccctttcctattgatgagcagagttt
tctcatatttctaattgacccaggaccagggacctggagggaggaaggaa
tggcccaaacctgtgtttagaagtttggctgagggactgagtcagaaaac
tcaagagaacccctacaagtttcaccatctttaggaggccttcaaaggct
ccctcagtcattaccctaaagaactgttatatcatcaggggaaatgggtg
agatctgcaacttacgggtttttcagtcttcccagtgcaagcccccggat
ctaatccaagcaaagaccaacactggctgtctgtggtctccagcatttat
ggcttattcatggtatcttctggtggtaagacctggagagaagttctgag
tctctggatttccttatttacttctttgtaaagtggatttacatagcaac
atccacagcaggggttctaaacttcagacagatggacgaacaatggaagg
agaccaaaaggttggcaacccaacccctcccttcattgaaacattccctt
tcttcaacctgagaatcgacctggtaggttcgagaatgctcccatgtatc
actgtcctgtgtgtggttcttctttactgccaattcctatcttaagagct
tcctgaaagagatcaacacttttcttgttatttttaggctttgtccagaa
ttcccagaggtaaggcaagaattagattttgatcaaatgtcttccttgca
cttgagtactgacagccaatcaagaagctgtatggggcttgagtgtgtat
tgtcattgtttcctctgacccttcagatatgttgagaagttgtatcctaa
tcctcttgggcccttcaagaaatgcggacctggggtgactccaaccggcc
cccaccaaaaatgagtgtagcttcctcacaggctatttggaccgtcacgc
acacacattttc
aggttgtcaggcttggtgacgaacaccttgacctgctgagtcatctggcc
catctggttctaactctaaatcttccgcagagcctctgtactgtttccca
tggccacgggaagcttaccgctctccagcagtaaaaagtccttttgtcct
ccacattacctcctgtttttcatcttccattcacaacaccattcgtgtgt
gtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_159237451_159238514
seq2: B6Ng01-032H08.b_44_1105 (reverse)

seq1  GAAAATGTGTGTGCGTGAAAGGGTCAGAATAAGCCTTGTGAGGAAGCTAC  50
      |||||||||||||||||  | ||||  ||| |||| ||||||||||||||
seq2  GAAAATGTGTGTGCGTG--ACGGTCCAAAT-AGCC-TGTGAGGAAGCTAC  46

seq1  ACTCA-TCTTGGTGGGGGCCGGTTGGAGTCACCCCAGGTCCGCCTTCCTT  99
      ||||| | ||||||||||||||||||||||||||||||||||| || |||
seq2  ACTCATTTTTGGTGGGGGCCGGTTGGAGTCACCCCAGGTCCGCATTTCTT  96

seq1  GAGGGGCCC-AGAGGATTTAGGATACAGACTTCTCAACATATCTGAAGGG  148
      || |||||| |||||| |||||||||| ||||||||||||||||||||||
seq2  GAAGGGCCCAAGAGGA-TTAGGATACA-ACTTCTCAACATATCTGAAGGG  144

seq1  TCAGAGGAAAACAATGACAATACACACTCAAGCCCCATACAGCTTCTTGA  198
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGG-AAACAATGACAATACACACTCAAGCCCCATACAGCTTCTTGA  193

seq1  TTGGCTGTCAGTACTCAAGTGCAAGGAAGACATTTGATC-AAATCTAATT  247
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTGGCTGTCAGTACTCAAGTGCAAGGAAGACATTTGATCAAAATCTAATT  243

seq1  CTTGCCTAACCTCTGGGAATTCAGGACAAAGCCT-AAAATAACAGGCAAA  296
      ||||||| |||||||||||||| ||||||||||| ||||||||| | |||
seq2  CTTGCCTTACCTCTGGGAATTCTGGACAAAGCCTAAAAATAACAAGAAAA  293

seq1  GTGTTGATCTCTTTCAGGAAGCTCTTAAGATAGGAATTGGCAGTAAAGAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGATCTCTTTCAGGAAGCTCTTAAGATAGGAATTGGCAGTAAAGAA  343

seq1  GAACCACACACAGGACAGTGATACATGGGAGCATTCTCGAACCTACCAGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCACACACAGGACAGTGATACATGGGAGCATTCTCGAACCTACCAGG  393

seq1  TCGATTCTCAGGTTGAAG-AAGGGAATGTTTCAATGAAGGGAGGGGTTGG  445
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCGATTCTCAGGTTGAAGAAAGGGAATGTTTCAATGAAGGGAGGGGTTGG  443

seq1  GTTGCCAACCTTTTGGTCTCCTTCCATTGTTCGTCCATCTGTCTGAAGTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCAACCTTTTGGTCTCCTTCCATTGTTCGTCCATCTGTCTGAAGTT  493

seq1  TAGAACCCCTGCTGTGGATGTTGCTATGTAAATCCACTTTACAAAGAAGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACCCCTGCTGTGGATGTTGCTATGTAAATCCACTTTACAAAGAAGT  543

seq1  AAATAAGGAAATCCAGAGACTCAGAACTTCTCTCCAGGTCTTACCACCAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGGAAATCCAGAGACTCAGAACTTCTCTCCAGGTCTTACCACCAG  593

seq1  AAGATACCATGAATAAGCCATAAATGCTGGAGACCACAGACAGCCAGTGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACCATGAATAAGCCATAAATGCTGGAGACCACAGACAGCCAGTGT  643

seq1  TGGTCTTTGCTTGGATTAGATCCGGGGGCTTGCACTGGGAAGACTGAAAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTTGCTTGGATTAGATCCGGGGGCTTGCACTGGGAAGACTGAAAA  693

seq1  ACCCGTAAGTTGCAGATCTCACCCATTTCCCCTGATGATATAACAGTTCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGTAAGTTGCAGATCTCACCCATTTCCCCTGATGATATAACAGTTCT  743

seq1  TTAGGGTAATGACTGAGGGAGCCTTTGAAGGCCTCCTAAAGATGGTGAAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGTAATGACTGAGGGAGCCTTTGAAGGCCTCCTAAAGATGGTGAAA  793

seq1  CTTGTAGGGGTTCTCTTGAGTTTTCTGACTCAGTCCCTCAGCCAAACTTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAGGGGTTCTCTTGAGTTTTCTGACTCAGTCCCTCAGCCAAACTTC  843

seq1  TAAACACAGGTTTGGGCCATTCCTTCCTCCCTCCAGGTCCCTGGTCCTGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACAGGTTTGGGCCATTCCTTCCTCCCTCCAGGTCCCTGGTCCTGG  893

seq1  GTCAATTAGAAATATGAGAAAACTCTGCTCATCAATAGGAAAGGGGAGGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTAGAAATATGAGAAAACTCTGCTCATCAATAGGAAAGGGGAGGA  943

seq1  GGTTAGGGCAGACTGAGAAGGGAGGGGAATGAAGATATCAGGCAGTGAAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGGGCAGACTGAGAAGGGAGGGGAATGAAGATATCAGGCAGTGAAG  993

seq1  CCCGTGAGAGGTCATAGGGGTCACACAGAGAGATGGGGTGTGACTGGTCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTGAGAGGTCATAGGGGTCACACAGAGAGATGGGGTGTGACTGGTCT  1043

seq1  TCCATTCAGGGAAGAATTC  1064
      |||||||||||||||||||
seq2  TCCATTCAGGGAAGAATTC  1062