BAC Information

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BAC

Clone NameB6Ng01-033G21
Chromosome2 (Build37)
Map Location 127,237,066 - 127,379,310
singlet/doubletdoublet
Overlap geneA530057A03Rik, Fahd2a, Kcnip3, Prom2
Upstream geneSlc27a2, Hdc, Gabpb1, Usp8, LOC100043714, Usp50, Trpm7, 2010106G01Rik, Ap4e1, Blvra, Ncaph, 1700041B20Rik, 1810024B03Rik, LOC100043408, Ascc3l1, Ciao1, Tmem127, ENSMUSG00000074822, Stard7, Dusp2, Astl, Adra2b
Downstream geneZfp661, Mrps5, Mal, LOC668892, Mall, Nphp1, 1500011K16Rik, Bub1, Acoxl, Bcl2l11, LOC100043424, LOC100043729
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033G21.bB6Ng01-033G21.g
ACCDH862479DH862480
length2001,057
definitionDH862479|Mus musculus domesticus DNA, BAC clone: B6Ng01-033G21, 5' end.DH862480|Mus musculus domesticus DNA, BAC clone: B6Ng01-033G21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,237,066 - 127,237,265)(127,378,250 - 127,379,310)
sequence
caaacagtgagattattaggttaaagagcacagcatatttatggccctgt
atgggatggggaagcctccttctcagcccccaggcagggcctatgtcccc
aaggtctgtctctgagtgaatgcccataccatttggtgccagaaaccaac
accctattggtgttttgaacaggcagcttggtatggggggttgttggggg

gaattctgcctccagaattcctgcccagatcctgctctcctggcttcccc
gcaagccccggggccaaggccttctccttgctgttgggctctgtattgcc
cattgctgcttagcctctcggggctgcctgctacctgctgaggcttgccc
acgatggggctctggtatctgtactcacctgcttatctagttcctgctgt
gccaagcagctgccaccccatcttgccaaatttgtgtgcacccctgcact
ggcatcacctcgcactgatttgaaagtgatttgtgtgtctggacactgta
tcccatgcccaccccctggctgagctcagctcatagctcttcctttctgg
gctctgtctgctgacacccccatacgaagggtcccaccttcatgtgggca
cataccttcctcaccaaagcgcattcctgggcgtccagatgccatctcct
ctgccggcttgcagccagtcacaccacagctccccctctgtataccacca
tttatccaggtgacctttcccccaaagacttgaccttgaagtctctgtgt
ttcctgtcctgtgccggtggggccaggaggacctggttgtgagagcaaag
aacctgtccctatttccctcagctctgccttatctggaaggaccacgctt
cctcacctccctaaacacaggcagctggcttttctcctccgtccgtggaa
ttagcagtagatctgtgaagccggagtccaaaccctagaggtcagcaagg
tcagacttcagatttgctcttgggaagttgagggtcttgtggttaaacag
gggatagaggtattccataaatacgccaaggccagcttgaacacagagtg
gtattgagtgcaccacatccagctcccagagtgacaagcaaaagaccacg
cttgtggaggtgtcagctctagcccaaaataaaactccttggtgttataa
ctagtttgggctttactacccagatgtagacaggaggaagaatacgcatg
ggctactgttcgatggtccttccttcaaagtccaggcgtcaactcagtgg
ctgatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_127237066_127237265
seq2: B6Ng01-033G21.b_51_250

seq1  CAAACAGTGAGATTATTAGGTTAAAGAGCACAGCATATTTATGGCCCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGTGAGATTATTAGGTTAAAGAGCACAGCATATTTATGGCCCTGT  50

seq1  ATGGGATGGGGAAGCCTCCTTCTCAGCCCCCAGGCAGGGCCTATGTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATGGGGAAGCCTCCTTCTCAGCCCCCAGGCAGGGCCTATGTCCCC  100

seq1  AAGGTCTGTCTCTGAGTGAATGCCCATACCATTTGGTGCCAGAAACCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTGTCTCTGAGTGAATGCCCATACCATTTGGTGCCAGAAACCAAC  150

seq1  ACCCTATTGGTGTTTTGAACAGGCAGCTTGGTATGGGGGGTTGTTGGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATTGGTGTTTTGAACAGGCAGCTTGGTATGGGGGGTTGTTGGGGG  200

seq1: chr2_127378250_127379310
seq2: B6Ng01-033G21.g_66_1122 (reverse)

seq1  CCATCAGCCACTAGGTTTTAATGCCTGGACTCTGAAGGAAAGGCCATCGA  50
      ||||||||||||  |  || | ||||||||| |||||||| | |||||||
seq2  CCATCAGCCACT--GAGTTGACGCCTGGACTTTGAAGGAAGGACCATCGA  48

seq1  ACAGTAG-CCATGCGCTAATTCTTCCTCCTGTCTTACATCCTGGTAGTGA  99
      ||||||| |||||||   ||||||||||||||| ||||||  |||||| |
seq2  ACAGTAGCCCATGCG--TATTCTTCCTCCTGTC-TACATCTGGGTAGT-A  94

seq1  AAGCCCAAACTTGTATAAACACAAGGGAGTTTTATTTTGGGCTAGAGCTG  149
      ||||||||||| ||   ||||| | |||||||||||||||||||||||||
seq2  AAGCCCAAACTAGTTATAACACCAAGGAGTTTTATTTTGGGCTAGAGCTG  144

seq1  ACACCTCCACAAGCGTGGTCTTTTTGCTTGTCACTCTGGGAGCTGGGTGT  199
      |||||||||||||||||||| ||||||||||||||||||||||||| |||
seq2  ACACCTCCACAAGCGTGGTC-TTTTGCTTGTCACTCTGGGAGCTGGATGT  193

seq1  GGTGCACTCAATACCACTCTGTGTTCAAGCTGGCCTTGGCGTATTTATGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCACTCAATACCACTCTGTGTTCAAGCTGGCCTTGGCGTATTTATGG  243

seq1  AATACCTCTAT-CCCTG-TTAACCACAAGACCCTCAACTTCCCAAGAGCA  297
      ||||||||||| ||||| ||||||||||||||||||||||||||||||||
seq2  AATACCTCTATCCCCTGTTTAACCACAAGACCCTCAACTTCCCAAGAGCA  293

seq1  AATCTGAAGTCTGACCTTGCTGACCTCTAGGGTTTGGACTCCGGCTTCAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGAAGTCTGACCTTGCTGACCTCTAGGGTTTGGACTCCGGCTTCAC  343

seq1  AGATCTACTGCTAATTCCACGGACGGAGGAGAAAAGCCAGCTGCCTGTGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTACTGCTAATTCCACGGACGGAGGAGAAAAGCCAGCTGCCTGTGT  393

seq1  TTAGGGAGGTGAGGAAGCGTGGTCCTTCCAGATAAGGCAGAGCTGAGGGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAGGTGAGGAAGCGTGGTCCTTCCAGATAAGGCAGAGCTGAGGGA  443

seq1  AATAGGGACAGGTTCTTTGCTCTCACAACCAGGTCCTCCTGGCCCCACCG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGGACAGGTTCTTTGCTCTCACAACCAGGTCCTCCTGGCCCCACCG  493

seq1  GCACAGGACAGGAAACACAGAGACTTCAAGGTCAAGTCTTTGGGGGAAAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGACAGGAAACACAGAGACTTCAAGGTCAAGTCTTTGGGGGAAAG  543

seq1  GTCACCTGGATAAATGGTGGTATACAGAGGGGGAGCTGTGGTGTGACTGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTGGATAAATGGTGGTATACAGAGGGGGAGCTGTGGTGTGACTGG  593

seq1  CTGCAAGCCGGCAGAGGAGATGGCATCTGGACGCCCAGGAATGCGCTTTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAGCCGGCAGAGGAGATGGCATCTGGACGCCCAGGAATGCGCTTTG  643

seq1  GTGAGGAAGGTATGTGCCCACATGAAGGTGGGACCCTTCGTATGGGGGTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGAAGGTATGTGCCCACATGAAGGTGGGACCCTTCGTATGGGGGTG  693

seq1  TCAGCAGACAGAGCCCAGAAAGGAAGAGCTATGAGCTGAGCTCAGCCAGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGACAGAGCCCAGAAAGGAAGAGCTATGAGCTGAGCTCAGCCAGG  743

seq1  GGGTGGGCATGGGATACAGTGTCCAGACACACAAATCACTTTCAAATCAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGCATGGGATACAGTGTCCAGACACACAAATCACTTTCAAATCAG  793

seq1  TGCGAGGTGATGCCAGTGCAGGGGTGCACACAAATTTGGCAAGATGGGGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAGGTGATGCCAGTGCAGGGGTGCACACAAATTTGGCAAGATGGGGT  843

seq1  GGCAGCTGCTTGGCACAGCAGGAACTAGATAAGCAGGTGAGTACAGATAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCTGCTTGGCACAGCAGGAACTAGATAAGCAGGTGAGTACAGATAC  893

seq1  CAGAGCCCCATCGTGGGCAAGCCTCAGCAGGTAGCAGGCAGCCCCGAGAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCCCATCGTGGGCAAGCCTCAGCAGGTAGCAGGCAGCCCCGAGAG  943

seq1  GCTAAGCAGCAATGGGCAATACAGAGCCCAACAGCAAGGAGAAGGCCTTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGCAGCAATGGGCAATACAGAGCCCAACAGCAAGGAGAAGGCCTTG  993

seq1  GCCCCGGGGCTTGCGGGGAAGCCAGGAGAGCAGGATCTGGGCAGGAATTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCGGGGCTTGCGGGGAAGCCAGGAGAGCAGGATCTGGGCAGGAATTC  1043

seq1  TGGAGGCAGAATTC  1061
      ||||||||||||||
seq2  TGGAGGCAGAATTC  1057