BAC Information

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BAC

Clone NameB6Ng01-033P20
Chromosome2 (Build37)6 (Build37)
Map Location 142,775,112 - 142,775,65035,836,997 - 35,837,691
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033P20.bB6Ng01-033P20.g
ACCDH862878DH862879
length755699
definitionDH862878|Mus musculus domesticus DNA, BAC clone: B6Ng01-033P20, 5' end.DH862879|Mus musculus domesticus DNA, BAC clone: B6Ng01-033P20, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,775,112 - 142,775,650)(35,836,997 - 35,837,691)
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaaagagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattact
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaattgtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcccggactttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagatggttaaattgatcctgatttaactt
tggtacctggtatctgtccagaaatttgtccatttcatccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgtttttggat
ttcttcacgatctgttgttatgtctcccttttcatttttgattttgttaa
ttaggattttgtccctgtgccctctagtgagtctactttaagggttatct
atctt
gaattctaaagggataggacttgtccaactggaaaaataattgacagttg
ggtgatgggatgcagtccttttcaaaggataagacaatcttctgccatag
ttgcttagcattcctggttctaatatgaagctgagaggttgtctagctgt
cctgaagtcaagttctgagagagagagagagagagagagagagagagaga
gagagagagagagagagagagttagatgctcttccaactccaacactcag
gatgtcattctgctccagaatgttctctgatccaaagttttctgaaaatc
ctctgggttatggtcaggcacttattctgtaacttacttgttaaaatcat
tttgagattgtgtccacaagctcacacccgttctcagagtccattgaggg
cagcaataaccagaaaaggatggttgaagagcttttaacatcctggtcac
taaggtaatattccagagaacgtaaaggaggcacagtctggagtgattgt
tctggttctctagtttccacaaggcatcagtgaaatgaatttggaaaccc
tcaagcagggcaaccatgtgtcagttaaagacgtagtgttgagagaagtc
taacataaaagaaaccaaagttctagctctggtttccttttctgcttcag
attaagaatctgtaaggatggttagcaaaacaatgctgggaaattgctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142775112_142775650
seq2: B6Ng01-033P20.b_263_802 (reverse)

seq1  AAGATAGATAAACCCTTAGCTAGACTCACTAGAGGGCACAGGGACAAAAT  50
      ||||||||||| || | |  ||||||||||||||||||||||||||||||
seq2  AAGATAGATAACCCTTAAAGTAGACTCACTAGAGGGCACAGGGACAAAAT  50

seq1  CCTAATTAACAAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCTG  100
      ||||||||||||||||| ||||||||||||||||||||||||||||| ||
seq2  CCTAATTAACAAAATCAAAAATGAAAAGGGAGACATAACAACAGATCGTG  100

seq1  AAGAAATCC-AAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAAC  149
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATCCAAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAAC  150

seq1  AAAACTGGAAAACCTGGACGAAATGGACAAATTTCTGGACAGATACCAGG  199
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAAACTGGAAAACCTGGATGAAATGGACAAATTTCTGGACAGATACCAGG  200

seq1  TACCAAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCC  249
      |||||||||| |||||||||||| || ||| |||||||||||||||||||
seq2  TACCAAAGTTAAATCAGGATCAATTTAACCATCTAAACAGTCCCATATCC  250

seq1  CCTAGAGAAATAGAAGCAGTTATAAATAGTCTCCCAGCCAAAAAAAGCCC  299
      |||| |||||||||||||||||| ||||||||||||||||||||||| ||
seq2  CCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGTCC  300

seq1  AGGACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATC  349
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATC  350

seq1  TAATTCCAGTTCTGCACAAACTTTTTCACAAGATAGAAGTAGAAGGTACT  399
      |||||||||||||||||||||| |||||||| ||||||||||||||||||
seq2  TAATTCCAGTTCTGCACAAACTATTTCACAAAATAGAAGTAGAAGGTACT  400

seq1  CTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCACA  449
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTACCCAACTCATTTTATGAAGCCACAATTACTCTGATACCTAAACCACA  450

seq1  GAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAATA  500

seq1  TCGATGTAAAAATCCTCAATAAAATTCTCGCTAACCGAAT  539
      |||||| ||||||||| |||||||||||||||||||||||
seq2  TCGATGCAAAAATCCTTAATAAAATTCTCGCTAACCGAAT  540

seq1: chr6_35836997_35837691
seq2: B6Ng01-033P20.g_69_767

seq1  GAATTCTAAAGGGATAGGACTTGTCCAACTGGAAAAATAATTGACAGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAGGGATAGGACTTGTCCAACTGGAAAAATAATTGACAGTTG  50

seq1  GGTGATGGGATGCAGTCCTTTTCAAAGGATAAGACAATCTTCTGCCATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATGGGATGCAGTCCTTTTCAAAGGATAAGACAATCTTCTGCCATAG  100

seq1  TTGCTTAGCATTCCTGGTTCTAATATGAAGCTGAGAGGTTGTCTAGCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTAGCATTCCTGGTTCTAATATGAAGCTGAGAGGTTGTCTAGCTGT  150

seq1  CCTGAAGTCAAGTTCTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGTCAAGTTCTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  200

seq1  GAGAGAGAGAGAGAGAGAGAGTTAGATGCTCTTCCAACTCCAACACTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGTTAGATGCTCTTCCAACTCCAACACTCAG  250

seq1  GATGTCATTCTGCTCCAGAATGTTCTCTGATCCAAAGTTTTCTGAAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCATTCTGCTCCAGAATGTTCTCTGATCCAAAGTTTTCTGAAAATC  300

seq1  CTCTGGGTTATGGTCAGGCACTTATTCTGTAACTTACTTGTTAAAATCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGTTATGGTCAGGCACTTATTCTGTAACTTACTTGTTAAAATCAT  350

seq1  TTTGAGATTGTGTCCACAAGCTCACACCCGTTCTCAGAGTCCATTGAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGATTGTGTCCACAAGCTCACACCCGTTCTCAGAGTCCATTGAGGG  400

seq1  CAGCAATAACCAGAAAAGGATGGTTGAAGAGCTTTTAACATCCTGGTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATAACCAGAAAAGGATGGTTGAAGAGCTTTTAACATCCTGGTCAC  450

seq1  TAAGGTAATATTCCAGAGAACGTAAAGGAGGCACAGTCTGGAGTGATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTAATATTCCAGAGAACGTAAAGGAGGCACAGTCTGGAGTGATTGT  500

seq1  TCTGGTTCTCTAGTTTCCACAAGGCATCAGTGAAATGAATTTGGAAACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTCTCTAGTTTCCACAAGGCATCAGTGAAATGAATTTGGAAACCC  550

seq1  TCAAGCAGGGCAACCATGTGTCAGTTAAAGACGTAGTGTTGAGAGAAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCAGGGCAACCATGTGTCAGTTAAAGACGTAGTGTTGAGAGAAGTC  600

seq1  TAACAT-AAAGAAACCAAAGTTCTAGCTCTGGTTTCC-TTTCTGCTTCAG  648
      |||||| |||||||||||||||||||||||||||||| ||||||||||||
seq2  TAACATAAAAGAAACCAAAGTTCTAGCTCTGGTTTCCTTTTCTGCTTCAG  650

seq1  ATTAAGAATCTGTAA-GATGGTTAGCAAAACAATGCTGGG-AATTGCTT  695
      ||||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  ATTAAGAATCTGTAAGGATGGTTAGCAAAACAATGCTGGGAAATTGCTT  699