BAC Information

Click to search

BAC

Clone NameB6Ng01-034C02
Chromosome2 (Build37)
Map Location 142,776,444 - 142,776,962
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034C02.bB6Ng01-034C02.g
ACCDH862978DH862979
length8001,235
definitionDH862978|Mus musculus domesticus DNA, BAC clone: B6Ng01-034C02, 5' end.DH862979|Mus musculus domesticus DNA, BAC clone: B6Ng01-034C02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagcaccattcctttaatggggttatttgat
tttctgaagtccaccttcttgagttctttatatatgttggatattattcc
cctatctgatttaggattggtaaagatcctttcccaatctgttggtggtc
tttttgacttattgacggtgtcttttgccttgcagaaactttggagtttc
attaggtcccatttgtcaattctcgatcttacagcacaagccattgctat
tctgttcaggaatttttcccctgttcccatatcttcaaggcttttcacca
ctttttcctctataagtttcattgtctctggttttatgtgaagttccttg
atccacttagatttgaccttagtacaaggagataagtatggatcgattca
catttttctacatgataacaaccaattgtgccagcaccaattgttgaaaa
tgctgtctttcttccactggatggttttagctctcatgtcgaagatcaag
taaccataggtgtgtgggttcatttctgggtcttcaattctcttccattg
gtctacttgtctgtctctataccagtaccatgcagtttttatcacaattt
gctctgtagtaaagcttttaggtcaggcatggtgcttccaccagagttct
ttttatccttgagaagagttttttgctatcctaggttttttgttattcca
gatgaattggcaaatttgctcttcctaatcatgaagaattgagtttggat
ttggtataggattggcattgaatcttgtagattgcttttggcaagatagc

gaattccttaaagaaaaacaggaaaacagatccaaacacgtgatggaaat
gaacaaaaccatactagacctaaaaagcgaagtagatacaataatgaaaa
ctcaaaatgaggctacggtagagatagaaaccctaggaacaaatttggaa
ccatagattcgagcatcagcaacagaatataagagatggaagagagaatc
tcaggtgcagaagactccatcaacataatcaaagaaaatgcaaaatacaa
aaagatcctaattcaaatcatccaggaaatccaggacacactgagaagac
taaacctatggataataggagttgatgataacaaagattttcaacttaga
gggccagcaaatatcttcaacaaaataatagaagaaagctttccaaactt
aaagaaagagatgtccatgaacatacaagaagcctacagaactccaaata
gactgtaaattcctcctgacacataataatcagaacaacaagtgcactaa
ataaagatagaatattacaagcagtaagggaaaaacgtcaagtaacatat
aaaggcaggcctatcagaattacaccatactattcaccagagagtatgaa
agccagaagatcctggacagatgttatacaaaccctaagagaacacaaat
gccagcccaggctaccatacccagccaaactctcaattaccatagatgga
aaaaccaaagtattccacgacaaaaccaaattcacacattatctttccat
gaatccagccattcaaaggataataatagaaaaaatattacaaggacaaa
aatagtacaaggacacgcactagaaaaaacaagaaagtaatcccccaaca
aaccaaaaagtagactgccacaagatcagaatgacactctaacaaaaaat
aaaaggaggcaacaattacttttccttaatatctcttaatatcactgtac
tcaactccacataaaagacatagactaacagactggctacacatacagac
ccaacatttgctgcttacaggagaacccatctcaagtaaaaagacaggca
ctacctcagagtgaaagctggaaacaatttgtaagcaaatgcctgaggaa
cagctgggtaggcattctaattcgaataaatctattccaccctagtatca
aagaccagaaggaccttctactctccaagtatctcaagagaactctaatc
cgtaattcattgctctccaagtccaagcacgctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776444_142776962
seq2: B6Ng01-034C02.b_322_844 (reverse)

seq1  GCTATCTTGCCAAAAGCAATCTAC-AGATTCAATG-CAATCCCCATCAAA  48
      |||||||||||||||||||||||| |||||||||| ||||||    | ||
seq2  GCTATCTTGCCAAAAGCAATCTACAAGATTCAATGCCAATCCTATACCAA  50

seq1  ATTCCAACTCAATTCTTCAACGAATTAGAAGGAGC-AATTTGCAAATTCA  97
      || | ||||||||||||||    ||||| | |||| ||||||| ||||||
seq2  ATCCAAACTCAATTCTTCA--TGATTAGGAAGAGCAAATTTGCCAATTCA  98

seq1  TCTGGAATAACAAAAAACCTAGGATAGC-AAAAAGTCTTCTCAAGGATAA  146
      |||||||||||||||||||||||||||| ||||| |||||||||||||||
seq2  TCTGGAATAACAAAAAACCTAGGATAGCAAAAAACTCTTCTCAAGGATAA  148

seq1  AAGAACCTCTGGTGGAATCACCATGCCTGACCT-AAAGCTTTACTACAGA  195
      ||  | ||||||||||| ||||||||||||||| ||||||||||||||||
seq2  AAAGAACTCTGGTGGAAGCACCATGCCTGACCTAAAAGCTTTACTACAGA  198

seq1  GC-AATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAG  244
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAG  248

seq1  ACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGT  294
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGGAAGAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGT  298

seq1  CACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGACAG  344
       ||||||||||||||| | ||||||||||||||||| |||||||||||||
seq2  TACTTGATCTTCGACATGAGAGCTAAAACCATCCAGTGGAAGAAAGACAG  348

seq1  CATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAA  394
      ||||||||||||||||||||||||||| ||||||||||||||||||| ||
seq2  CATTTTCAACAATTGGTGCTGGCACAATTGGTTGTTATCATGTAGAAAAA  398

seq1  TGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGG  444
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGG  448

seq1  ATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAA  494
      |||||||||||||||||||||||||||||| |||||||||||||||| ||
seq2  ATCAAGGAACTTCACATAAAACCAGAGACAATGAAACTTATAGAGGAAAA  498

seq1  AGTGGGGAAAAGCCTTGAAGATATG  519
      ||||| |||||||||||||||||||
seq2  AGTGGTGAAAAGCCTTGAAGATATG  523