BAC Information

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BAC

Clone NameB6Ng01-034E24
Chromosome2 (Build37)14 (Build37)
Map Location 142,776,479 - 142,777,00689,512,953 - 89,513,942
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034E24.bB6Ng01-034E24.g
ACCDH863104DH863105
length764994
definitionDH863104|Mus musculus domesticus DNA, BAC clone: B6Ng01-034E24, 5' end.DH863105|Mus musculus domesticus DNA, BAC clone: B6Ng01-034E24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,479 - 142,777,006)(89,512,953 - 89,513,942)
sequence
gaattctttttcagctctgagccccattttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatgtatattggatattagtcccc
tatccgatttgggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacggtgtcttttgccttgcagaagctttgcaattttat
gaggtcccatttattgattctcgatcttaaagcacaagccattgctgttc
tattcaggtacttttcccttgtacccatatcttggaggttttcccctatt
ttctcctctatacgtttcagtgtctctggttttatgtggagttccttaat
ccacttagatttgaccttaggaaaaggagatagaaatggatcaattccca
ttcttctacatgataaccgccagttgtgccagcaacattttttgaaaatg
ctgtctttttttccactggatggttttagctccctgtcaaagatcaagtg
accataggtgtgtgggttcatctctgggtcttcaattctattccatttgg
tttacttgtctgtcactataccagtaccatgcagtttttaatcacaattg
ctctgtagtataacttttaggtcaggcatggtgatttccaccagaggttc
ttttatccttgaggagagttttttctatcctaggttttttgttattccag
atgaatctgcctaattgcccttttctagtccttgaagaattgagttggaa
ttttgatggggatt
gaattcaatataaagcatggatagttactgtagaggcataggaagcaaga
tgctttattggctacctgttgtgaacgaattttatatatatataaactta
aattttaaatgaggttccatttgtccattgttaatctcagagcctcagac
attggttatctcttcaaaacattttcccctgtgccaatgctttctagatg
atttctcagtttctgttctattagaagagaaaagtggttcacggttttat
atagaggttcttgattaatttaaaacatatatatatatatatatatatat
aacttaaatgattctcaagggaagagttgagaaaaaataaataagtggaa
gtaaactatcctttcaaaaatcaacacaaacagaagttatataatatcaa
ctaagaattaagttgacatagcaaaacacatgatatgaaaaaaatacaga
atatggtttgtaatgttttttgaaatcaatttctattatattaactaact
ctaagtaatagaatagcttgatctttggacttctcatggaaactttcaga
aaaatcttttcacatttactaatgtaaagaatatattttaatagtaacac
cataaaatcaatttatagaatagagttgtaatatattaaatataataagg
acataagctggacctaagctgaagatttttcaaaagtaactgagccttga
aagtctcttcctcctccatcccttaatgtattgtagaagtcaagagtttg
cagtagttcaaagttaaaaagaaaggcatgatcattaaagtataaagaac
tggaagacagccaattatttgtggcttgtgacagtagaggagttggtatt
aagctacagagtacctgggggtgactattaagaaatggaacacaccatac
tgagaacttttctcgctgattgacctattttcaaagaaggagttgcattt
ccttacagagcaaaaccacaatgagctacctgagtggtgtggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776479_142777006
seq2: B6Ng01-034E24.b_272_804 (reverse)

seq1  AATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAGGAGCAA  50
      ||||||||||||||||||||||||||||||||| || |   || | ||||
seq2  AATCCCCATCAAAATTCCAACTCAATTCTTCAAGGACTAGAAAAGGGCAA  50

seq1  TT-TGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAAGTCT  99
      ||  ||| |||||||||||||||||||||||||||||||| ||||| |||
seq2  TTAGGCAGATTCATCTGGAATAACAAAAAACCTAGGATAGAAAAAACTCT  100

seq1  TCTCAAGGATAAAAGAACCTCTGGTGG-AATCACCATGCCTGACCT-AAA  147
       |||||||||||||||||||||||||| |||||||||||||||||| |||
seq2  CCTCAAGGATAAAAGAACCTCTGGTGGAAATCACCATGCCTGACCTAAAA  150

seq1  GCTTTACTACAGAGCAATTGTGA-TAAAAACTGCATGGTACTGGTATAGA  196
      | | ||||||||||||||||||| ||||||||||||||||||||||||| 
seq2  GTTATACTACAGAGCAATTGTGATTAAAAACTGCATGGTACTGGTATAGT  200

seq1  GACAGACAAGTAGACC-AATGGAATAGAATTGAAGACCCAGAAATGAACC  245
      |||||||||||| ||| ||||||||||||||||||||||||| |||||||
seq2  GACAGACAAGTAAACCAAATGGAATAGAATTGAAGACCCAGAGATGAACC  250

seq1  CACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAG  295
      ||||||||||||||||||||||||| ||| ||||||||||||||||||||
seq2  CACACACCTATGGTCACTTGATCTTTGAC-AGGGAGCTAAAACCATCCAG  299

seq1  AGG-AAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGT  344
       || || ||||||||||||||||| || || |||||||||||||||  ||
seq2  TGGAAAAAAAGACAGCATTTTCAAAAAATGTTGCTGGCACAACTGGCGGT  349

seq1  TATCATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAG  394
      |||||||||||||||||||||| |||||||   ||||||||| | |||||
seq2  TATCATGTAGAAGAATGGGAATTGATCCATTTCTATCTCCTTTTCCTAAG  399

seq1  GTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAA  444
      ||||||||||||||||| |||||||| |||||||||||||||||||||||
seq2  GTCAAATCTAAGTGGATTAAGGAACTCCACATAAAACCAGAGACACTGAA  449

seq1  ACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGG  494
      || ||||||||||||| | ||| ||| |||  |||||||||| ||| |||
seq2  ACGTATAGAGGAGAAAATAGGGGAAAACCTCCAAGATATGGGTACAAGGG  499

seq1  ACAAATTCCTGAACAGAACAGCAATGGCTTGTGC  528
      | || | |||||| ||||||||||||||||||||
seq2  AAAAGTACCTGAATAGAACAGCAATGGCTTGTGC  533

seq1: chr14_89512953_89513942
seq2: B6Ng01-034E24.g_70_1063 (reverse)

seq1  TTCCACACCAACTTCAGTAGCTCATTGTTGGTTTTGCTCTGCTATGTAAT  50
      ||||||||| |||   ||||||||||| |||||||||||||  | | |||
seq2  TTCCACACC-ACTCAGGTAGCTCATTG-TGGTTTTGCTCTGTAAGGAAAT  48

seq1  GCAACCTCCTTCTTTGAAAATGAGTCAATCAGCGAGAAAAGTTCTCAGTA  100
      |||| ||||||||||||||||  |||||||||||||||||||||||||||
seq2  GCAA-CTCCTTCTTTGAAAATAGGTCAATCAGCGAGAAAAGTTCTCAGTA  97

seq1  TGGTGTGTTCCA-TTCTTTATAGTCA-CCCCAGGTACTCTGTAGCTT-AT  147
      |||||||||||| ||||| ||||||| |||||||||||||||||||| ||
seq2  TGGTGTGTTCCATTTCTTAATAGTCACCCCCAGGTACTCTGTAGCTTAAT  147

seq1  ACCACCTCCTCTACTGTCAC-AGCC-CAAATAATTGGCTGTCTTCCAGTT  195
      |||| ||||||||||||||| |||| ||||||||||||||||||||||||
seq2  ACCAACTCCTCTACTGTCACAAGCCACAAATAATTGGCTGTCTTCCAGTT  197

seq1  CTTTATACTTTAATGATCATGCCTTTCTTTTTAACTTTGAACTACTGCAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATACTTTAATGATCATGCCTTTCTTTTTAACTTTGAACTACTGCAA  247

seq1  ACTCTTGACTTCTACAATACCTTAAGGGATGGAGGAGGAAGAGACTTTCA  295
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACTCTTGACTTCTACAATACATTAAGGGATGGAGGAGGAAGAGACTTTCA  297

seq1  AGGCTCAGTTACTTTTGAAAAATCTTCAGCTTAGGTCCAGCTTATGTCCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCAGTTACTTTTGAAAAATCTTCAGCTTAGGTCCAGCTTATGTCCT  347

seq1  TATTATATTTAATATATTACAACTCTATTCTATAAATTGATTTTATGGTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATTTAATATATTACAACTCTATTCTATAAATTGATTTTATGGTG  397

seq1  TTACTATTAAAATATATTCTTTACATTAGTAAATGTG-AAAGATTTTTCT  444
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTACTATTAAAATATATTCTTTACATTAGTAAATGTGAAAAGATTTTTCT  447

seq1  GAAAGTTTCCATGAGAAGTCC-AAGATCAAGCTATTCTATTACTTAGAGT  493
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAAAGTTTCCATGAGAAGTCCAAAGATCAAGCTATTCTATTACTTAGAGT  497

seq1  TAGTTAATATAATAGAAATTGATTTCAAAAAACATTACAAACCATATTCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAATATAATAGAAATTGATTTCAAAAAACATTACAAACCATATTCT  547

seq1  GTATTTTTTTCATATCATGTGTTTTGCTATGTCAACTTAATTCTTAGTTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTTTCATATCATGTGTTTTGCTATGTCAACTTAATTCTTAGTTG  597

seq1  ATATTATATAACTTCTGTTTGTGTTGATTTTTGAAAGGATAGTTTACTTC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATATAACTTCTGTTTGTGTTGATTTTTGAAAGGATAGTTTACTTC  647

seq1  CACTTATTTATTTTTTCTCAACTCTTCCCTTGAGAATCATTTAAGTTATA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATTTATTTTTTCTCAACTCTTCCCTTGAGAATCATTTAAGTTATA  697

seq1  TATATATATATATATATATATTTTTTAAATTAATCAAGAACCTCTATATA  743
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATGTTTTAAATTAATCAAGAACCTCTATATA  747

seq1  AAACCGTGAACCACTTTTCTCTTCTAATAGAACAGAAACTGAGAAATCAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCGTGAACCACTTTTCTCTTCTAATAGAACAGAAACTGAGAAATCAT  797

seq1  CTAGAAAGCATTGGCACAGGGGAAAATGTTTTGAAGAGATAACCAATGTC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAGCATTGGCACAGGGGAAAATGTTTTGAAGAGATAACCAATGTC  847

seq1  TGAGGCTCTGAGATTAACAATGGACAAATGGAACCTCATTTAAAATTTAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTCTGAGATTAACAATGGACAAATGGAACCTCATTTAAAATTTAA  897

seq1  GTTTATATATATATAAAATTCGTTCACAACAGGTAGCCAATAAAGCATCT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATATATATATAAAATTCGTTCACAACAGGTAGCCAATAAAGCATCT  947

seq1  TGCTTCCTATGCCTCTACAGTAACTATCCATGCTTTATATTGAATTC  990
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCTATGCCTCTACAGTAACTATCCATGCTTTATATTGAATTC  994