BAC Information

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BAC

Clone NameB6Ng01-034L03
Chromosome2 (Build37)
Map Location 91,178,810 - 91,224,537
singlet/doubletdoublet
Overlap gene1110051M20Rik
Upstream geneLOC100043113, LOC668629, GA_x5J8B7W2BV0-3116-4045, Ptprj, 4933423P22Rik, Nup160, Fnbp4, Rpl30-ps3, Agbl2, Mtch2, C1qtnf4, Ndufs3, Kbtbd4, Ptpmt1, Cugbp1, LOC279067, Rapsn, Psmc3, Slc39a13, Sfpi1, Mybpc3, Madd, Nr1h3, Acp2, Ddb2, Pacsin3, Zfp289
Downstream geneLrp4, LOC619941, Ckap5, F2, Zfp408, Arhgap1, D2Ertd391e, LOC100043179, D230010M03Rik, D030051N19Rik, Chrm4, Mdk, Dgkz, Creb3l1, Phf21a, Gyltl1b, Pex16, 1700029I15Rik, Mapk8ip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034L03.bB6Ng01-034L03.g
ACCDH863371DH863372
length8061,026
definitionDH863371|Mus musculus domesticus DNA, BAC clone: B6Ng01-034L03, 5' end.DH863372|Mus musculus domesticus DNA, BAC clone: B6Ng01-034L03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,178,810 - 91,179,640)(91,223,500 - 91,224,537)
sequence
gaattctgtaaatggcagagagcaaagaggtgctggaatacctaaaaaca
ttaaaattatatataaaaaattctgcatggttcaaagattagtttggtct
tctgtctcttcctttctctctgtctgtgtctctgcctatctctgtctctc
tctctctctctctgtgtgtgtgtgtgtgtgtgtgtgtccctagctgtcct
ggaactcactctgtacaccagtttagcctcaaacttggagatctgctgcc
tctacctccagaataaaggtctccacacctaatgatacttcttttagtca
ggaaccaaaataaaaaccacatgaccttgcagactgtttgttttgttttc
aagacatgtttttctctgtgtatcatccctagctgtcctggaactcacta
gtccaagctggcctcagactcactctcagagagctgcctgcctctgcctc
tcagagtgcggggaaggattattttcaatgatctgtaaacttcatgagac
aagcataccctaaggcttgaagtggggaaaggtgtttcaagacctccaaa
ccagtcattgctccaatgtatcaacatcccgtgaatgtcttcctctggag
tgaaagcgaaggagaaaaacctggagatgatagagcatggcgacacgtcc
tagctgagctccttcagcctgtgctgccttagaccccctctgtgccttaa
ctagcatgcagctgaaactaattctcactgggattcgaagcctcaccgaa
gtccttacggtgaagtaagaaattcatggtaagttagaagagtggatgga
cgacta
gaattctttatattctatggcacataggatgtgtctctgagttagacttg
tggtgtacacggtacagtagtagccctaaagaaaatgacagtccaggtct
gtcctcagctgtgtcagccttgcagcagtcaagataggttggactgctac
aaacaatgactttagggaagccaggcctgctcagggagtttgcagagcca
ggcggaggggggctgggaaaggattccccagaaacctcaagtagtggttt
catcgaagtgaggataaggatgctctgttaaccttaaaacttccctggag
gcgcactcagaagaggtggtcatgagtttatagaggctgtggttgtatga
agtgtttctcatagaaggacttgatctaatctgtagttcggagttttgtt
agtggaaaacccagacacccctccttgttcataagtggttctgtctggtt
ttacctttccattctggatctagccttctgagtctcatctaataagggat
tcttcgtttttctctttctagttttaacagcgtatgccaaggaactcaca
ttctcttccgggaattcagctttatacaagccacacctcataatagagca
tcattccttcgggccttctggagatgcttccgaactgtagggaaaaatgg
tggtaagtattctcaactctattttgccccatttccaaccaccccctttc
tattctttccaaacatttttcctttttaaaaaatcccatttatatattgg
atatgtgcttatgtgtgtctgtgggctgcaaagtgacctattcaggcagt
tagagtgcacgtctggagataacggtgcacagctgaagttcataggacag
actgcacgagctgcttctctgtcaccctgtggcttctggggattaactca
cgtcaccaggcttggcaacacgtgctttcttcaactgatcgagcttgcca
ggccatctgtatatattgtcctataatacagttgactgagctttggaata
ccttatctaggaaacaactctgctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_91178810_91179640
seq2: B6Ng01-034L03.b_45_850

seq1  GAATTCTGTAAATGGCAGAGAGCAAAGAGGTGCTGGAATACCTAAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAAATGGCAGAGAGCAAAGAGGTGCTGGAATACCTAAAAACA  50

seq1  TTAAAATTATATATAAAAAATTCTGCATGGTTCAAAGATTAGTTTGGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTATATATAAAAAATTCTGCATGGTTCAAAGATTAGTTTGGTCT  100

seq1  TCTGTCTCTTCCTTTCTCTCTGTCTGTGTCTCTGCCTATCTCTGTCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCTTCCTTTCTCTCTGTCTGTGTCTCTGCCTATCTCTGTCTCTC  150

seq1  TCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTCCCTAGCTGTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTCCCTAGCTGTCCT  200

seq1  GGAACTCACTCTGTAGACCAGTTTAGCCTCAAACTTGGAGATCTGCTGCC  250
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGAACTCACTCTGTACACCAGTTTAGCCTCAAACTTGGAGATCTGCTGCC  250

seq1  TCTACCTCCAGAATAAAGGTCTCCACACCTAATGATACTTCTTTTAGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTCCAGAATAAAGGTCTCCACACCTAATGATACTTCTTTTAGTCA  300

seq1  GGAACCAAAATAAAAACCACATGACCTTGCAGACTGTTTGTTTTGTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCAAAATAAAAACCACATGACCTTGCAGACTGTTTGTTTTGTTTTC  350

seq1  AAGACATGTTTTTCTCTGTGTATCAGCCCTAGCTGTCCTGGAACTCACTG  400
      ||||||||||||||||||||||||| ||||||||||||||||||||||| 
seq2  AAGACATGTTTTTCTCTGTGTATCATCCCTAGCTGTCCTGGAACTCACTA  400

seq1  GTCCAAGCTGGCCTCAGACTCACTCTCAGAGAGCTGCCTGCCTCTGCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAGCTGGCCTCAGACTCACTCTCAGAGAGCTGCCTGCCTCTGCCTC  450

seq1  TCAGAGTGCGGGGAAGGATTATTTTTAATGATCTGTAAACTTCATGAGAC  500
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCAGAGTGCGGGGAAGGATTATTTTCAATGATCTGTAAACTTCATGAGAC  500

seq1  AAGCATACCCTAAGGCTTGAAGTGGGGAAAGGTGTTTCAAGACCTCCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATACCCTAAGGCTTGAAGTGGGGAAAGGTGTTTCAAGACCTCCAAA  550

seq1  CCAGTCATTGCTCCAATGTATCAAACATCCTGTGAATGTCTTTCCTTTGG  600
      |||||||||||||||||||||| ||||||| ||||||||| ||||| |||
seq2  CCAGTCATTGCTCCAATGTATC-AACATCCCGTGAATGTC-TTCCTCTGG  598

seq1  AGTGGAAAGCGAAAGGAGAAGAAAACCTGGAGATGAGTTGGGCATGGGGA  650
      ||| ||||||| |||||||  ||||||||||||||| | | |||||| ||
seq2  AGT-GAAAGCG-AAGGAGA--AAAACCTGGAGATGA-TAGAGCATGGCGA  643

seq1  CAAAGTTCCTAGCTGAGCTCCTTCAAGCACTGCAGCTGCCCTAGACTCCA  700
      |  |  |||||||||||||||||| ||| |||  |||||| ||||| || 
seq2  C--ACGTCCTAGCTGAGCTCCTTC-AGC-CTG-TGCTGCCTTAGAC-CCC  687

seq1  CTCTTGTGGCCTTTAACCAATCCTTCCAGCTCAGCCTATTTTCTCCTCAG  750
      ||| ||||  | ||||| |   | | ||||| |  ||| ||    |||| 
seq2  CTC-TGTG--CCTTAACTA--GCATGCAGCTGAAACTAATT----CTCAC  728

seq1  T-GATTTCAAAGCCTCACCAAAGGCCCTTCAGGCTGAACTAAACAAATCA  799
      | |  ||| |||||||||| ||| ||  | | | |||| |||  || |||
seq2  TGGGATTCGAAGCCTCACCGAAGTCC--TTACGGTGAAGTAAGAAATTCA  776

seq1  TGGGAAAGTTAGAAGAGAGGATGCAACGACTA  831
      | || |||||||||||| |||||  |||||||
seq2  T-GGTAAGTTAGAAGAGTGGATG-GACGACTA  806

seq1: chr2_91223500_91224537
seq2: B6Ng01-034L03.g_68_1093 (reverse)

seq1  CCAGCAGAGTTGTCTCCTCAGAATAAGGTATTCCAAAGCCTAGAGTCAAA  50
      ||||||||||||| |||| || |||||||||||||||||    |||| ||
seq2  CCAGCAGAGTTGTTTCCT-AG-ATAAGGTATTCCAAAGC--TCAGTC-AA  45

seq1  CTGTATTTATAGGACAATAATAATAACAGATGGGGCTGGCAAGCTGGATC  100
      ||||| |||||||||||| |||   |||||| || |||||||||| ||||
seq2  CTGTA-TTATAGGACAAT-ATA--TACAGAT-GGCCTGGCAAGCTCGATC  90

seq1  AGTTGGAAGAAAGGCACGTGCTGCCAAGCCTGGTGACGTGAGTTTAATCC  150
      |||| ||||||| ||||||| ||||||||||||||||||||| |||||||
seq2  AGTT-GAAGAAA-GCACGTGTTGCCAAGCCTGGTGACGTGAG-TTAATCC  137

seq1  CCAGAAGCCACAGGGTGGACAGAGAAGCAGCTCCTGCAGTCTGTCCTATG  200
      |||||||||||||||| |||||||||||||||| ||||||||||||||||
seq2  CCAGAAGCCACAGGGT-GACAGAGAAGCAGCTCGTGCAGTCTGTCCTATG  186

seq1  AACTTCAGCTGTGCACCGTTATCTCCAGACGTGCACTCTAACTGCCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCAGCTGTGCACCGTTATCTCCAGACGTGCACTCTAACTGCCTGAA  236

seq1  TAGGTCACTTTGCAGCCCACAGACACACATAAGCACATATCCAATATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCACTTTGCAGCCCACAGACACACATAAGCACATATCCAATATATA  286

seq1  AATGGGATTTTTTAAAA--GGAAAATGTTTGGAAAGAATAGAAAGGGGGT  348
      |||||||||||||||||  | |||||||||||||||||||||||||||||
seq2  AATGGGATTTTTTAAAAAGGAAAAATGTTTGGAAAGAATAGAAAGGGGGT  336

seq1  GGTTGGAAATGGGGCAAAATAGAGTTGAGAATACTTACCACCATTTTTCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGAAATGGGGCAAAATAGAGTTGAGAATACTTACCACCATTTTTCC  386

seq1  CTACAGTTCGGAAGCATCTCCAGAAGGCCCGAAGGAATGATGCTCTATTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTTCGGAAGCATCTCCAGAAGGCCCGAAGGAATGATGCTCTATTA  436

seq1  TGAGGTGTGGCTTGTATAAAGCTGAATTCCCGGAAGAGAATGTGAGTTCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGTGGCTTGTATAAAGCTGAATTCCCGGAAGAGAATGTGAGTTCC  486

seq1  TTGGCATACGCTGTTAAAACTAGAAAGAGAAAAATGAAGAATCCCTTATT  548
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTGGCATACGCTGTTAAAACTAGAAAGAGAAAAACGAAGAATCCCTTATT  536

seq1  AGATGAGACTCAGAAGGCTAGATCCAGAATGGAAAGGTAAAACCAGACAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGACTCAGAAGGCTAGATCCAGAATGGAAAGGTAAAACCAGACAG  586

seq1  AACCACTTATGAACAAGGAGGGGTGTCTGGGTTTTCCACTAACAAAACTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTTATGAACAAGGAGGGGTGTCTGGGTTTTCCACTAACAAAACTC  636

seq1  CGAACTACAGATTAGATCAAGTCCTTCTATGAGAAACACTTCATACAACC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACTACAGATTAGATCAAGTCCTTCTATGAGAAACACTTCATACAACC  686

seq1  ACAGCCTCTATAAACTCATGACCACCTCTTCTGAGTGCGCCTCCAGGGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTCTATAAACTCATGACCACCTCTTCTGAGTGCGCCTCCAGGGAA  736

seq1  GTTTTAAGGTTAACAGAGCATCCTTATCCTCACTTCGATGAAACCACTAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAGGTTAACAGAGCATCCTTATCCTCACTTCGATGAAACCACTAC  786

seq1  TTGAGGTTTCTGGGGAATCCTTTCCCAGCCCCCCTCCGCCTGGCTCTGCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGTTTCTGGGGAATCCTTTCCCAGCCCCCCTCCGCCTGGCTCTGCA  836

seq1  AACTCCCTGAGCAGGCCTGGCTTCCCTAAAGTCATTGTTTGTAGCAGTCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCCTGAGCAGGCCTGGCTTCCCTAAAGTCATTGTTTGTAGCAGTCC  886

seq1  AACCTATCTTGACTGCTGCAAGGCTGACACAGCTGAGGACAGACCTGGAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTATCTTGACTGCTGCAAGGCTGACACAGCTGAGGACAGACCTGGAC  936

seq1  TGTCATTTTCTTTAGGGCTACTACTGTACCGTGTACACCACAAGTCTAAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTTCTTTAGGGCTACTACTGTACCGTGTACACCACAAGTCTAAC  986

seq1  TCAGAGACACATCCTATGTGCCATAGAATATAAAGAATTC  1038
      ||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGACACATCCTATGTGCCATAGAATATAAAGAATTC  1026