BAC Information

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BAC

Clone NameB6Ng01-036J23
Chromosome2 (Build37)
Map Location 87,830,300 - 87,831,293
singlet/doubletsinglet
Overlap geneOlfr1158
Upstream geneOlfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74
Downstream geneOlfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036J23.bB6Ng01-036J23.g
ACCDH864736DH864737
length1,119977
definitionDH864736|Mus musculus domesticus DNA, BAC clone: B6Ng01-036J23, 5' end.DH864737|Mus musculus domesticus DNA, BAC clone: B6Ng01-036J23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaggcaggttttatcagatcagttttatagagacaagttgcag
aaagaattggctagacacaggaaagataaggagctagagaatgagaagga
tccaagggattagaacagatggccaacatgagtgtgaggctaagcagagc
aattcagtgggaagacagataaagtcagtcagcttggggatgagtttgag
ccagaacagatgaattggactagccagccagagttcagaaagaaaaacta
agtgtgagcttcttcagtaggaactctcatagaattaaaacattgtaggc
cttcattatgaagtatagaggccagaaattttcaggactaagcctaggtt
agcaaacaggcagtaagcctctaagaaaaccagtacatgaggttaatagt
ttattttacggacccccagtaagacattacaaacagagagatcatggaac
atacaaaacttaaagagatgtctccatttaatccattgactcagagctca
gggaatctcttggaaatgaggcagaagtgatagagggaacagagactatg
gaggacagtagaagaacaagaccctattaaacaagtgatcaaaatataca
tgaatcactgcgacttaagcataatgcacagggcctacataggttctcac
taggttgccaggatatgcataataactttgatctcagcacttttactgga
ctcctgaatgtgtctagggtacttgttccttttcttgagacttctactgc
tgacttgcttactcagatttggtatgagggttcttttttattatatttta
ctttgtttatttttgctctctatttgaagtgtaatatattcttgtactgg
ttattttatttcttgcgtgtctattttcctccttccaagttaaatcccct
atcccttctacattccctctgtttctttgccgtgctccacaaacccaccc
acatactccctctatcagaccctagcgtccactactcttgggtcagagca
ttcacagacaagggctccctagcatgatgacgatagtcattcactgctac
aatgccgctggcatgggtctcaggtactctttttgttgctagtcctcagc
ctgaaggttgatggtgatc
gaattctatctcctgggattcagtgatcatccagagctccagagtctcct
atttgctgtgtttttctccatctactccattactctgatggggaatattg
gcatgattgtattgatcacagtcagtcctaatttacacattcccatgtac
tttttcctctggatgctgtccttcatagatgcatgttcctcctctgtcat
tgcccccaaattacttgtggatttgatttctgacaagaaggtgatttctt
acaatggctgtgctacacagttttatttttgctgctctctggttgataca
gaatctttcctgttggctgccatggcttatgacaggtacattgcaatctg
taaccccctgctctatactgtaattatgtccaagagggtctgtactcagc
tggcatttgaagcattcttgggtggaactatgagttcaataatccataca
actaacactttccagttgtcattctgctccaaagaaattaaccatttctt
ttgtgatatgactccactcttctctctgtcctgctttgatacttacacac
atgacattatactggtgtttttcacaagtttggtggaagctgtctgtctt
cttgctgttctcctctcctatatgtatattatagtgggccattcttaaaa
acaggttttgcagagggaagaaagaaagggtttctctacttgtgcttctc
acctggcagtaatcaaccattttatcatggcaccctgatttttatttaat
ttgtggtctagtacaggccattcaatggatattgacaaaatgacctctgt
gttctatacaatggattatacccatgcttaaccccttgatatacagtctc
aggaacaaaaatgtcaaattcgctttagaaaatattagcaaaattgtttt
tttagttattaagatgggctcacatagaacttctttagttttcatgtaag
tctaagtcagtgatattgatacccaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87830300_87831293
seq2: B6Ng01-036J23.g_68_1044

seq1  GAATTCTATCTCCTGGGATTCAGTGATCATCCAGAGCTCCAGAGTCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCTCCTGGGATTCAGTGATCATCCAGAGCTCCAGAGTCTCCT  50

seq1  ATTTGCTGTGTTTTTCTCCATCTACTCCATTACTCTGATGGGGAATATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTGTGTTTTTCTCCATCTACTCCATTACTCTGATGGGGAATATTG  100

seq1  GCATGATTGTATTGATCACAGTCAGTCCTAATTTACACATTCCCATGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGATTGTATTGATCACAGTCAGTCCTAATTTACACATTCCCATGTAC  150

seq1  TTTTTCCTCTGGATGCTGTCCTTCATAGATGCATGTTCCTCCTCTGTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTCTGGATGCTGTCCTTCATAGATGCATGTTCCTCCTCTGTCAT  200

seq1  TGCCCCCAAATTACTTGTGGATTTGATTTCTGACAAGAAGGTGATTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCAAATTACTTGTGGATTTGATTTCTGACAAGAAGGTGATTTCTT  250

seq1  ACAATGGCTGTGCTACACAGTTTTATTTTTGCTGCTCTCTGGTTGATACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGCTGTGCTACACAGTTTTATTTTTGCTGCTCTCTGGTTGATACA  300

seq1  GAATCTTTCCTGTTGGCTGCCATGGCTTATGACAGGTACATTGCAATCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTTCCTGTTGGCTGCCATGGCTTATGACAGGTACATTGCAATCTG  350

seq1  TAACCCCCTGCTCTATACTGTAATTATGTCCAAGAGGGTCTGTACTCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCCCTGCTCTATACTGTAATTATGTCCAAGAGGGTCTGTACTCAGC  400

seq1  TGGCATTTGAAGCATTCTTGGGTGGAACTATGAGTTCAATAATCCATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTTGAAGCATTCTTGGGTGGAACTATGAGTTCAATAATCCATACA  450

seq1  ACTAACACTTTCCAGTTGTCATTCTGCTCCAAAGAAATTAACCATTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACACTTTCCAGTTGTCATTCTGCTCCAAAGAAATTAACCATTTCTT  500

seq1  TTGTGATATGACTCCACTCTTCTCTCTGTCCTGCTTTGATACTTACACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATATGACTCCACTCTTCTCTCTGTCCTGCTTTGATACTTACACAC  550

seq1  ATGACATTATACTGGTGTTTTTCACAAGTTTGGTGGAAGCTGTCTGTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATTATACTGGTGTTTTTCACAAGTTTGGTGGAAGCTGTCTGTCTT  600

seq1  CTTGCTGTTCTCCTCTCCTATATGTATATTATAGT-GGCCATTCTT-AAA  648
      ||||||||||||||||||||||||||||||||||| |||||||||| |||
seq2  CTTGCTGTTCTCCTCTCCTATATGTATATTATAGTGGGCCATTCTTAAAA  650

seq1  ACAGGTTCTGCAGAGGGAAGAAAGAAAGGG-TTCTCTACTTGTGCTTCTC  697
      ||||||| |||||||||||||||||||||| |||||||||||||||||||
seq2  ACAGGTTTTGCAGAGGGAAGAAAGAAAGGGTTTCTCTACTTGTGCTTCTC  700

seq1  ACCTGGCAGTAATC-ACCA-TTTATCATGGCACCCTGATTTTTATTT-AT  744
      |||||||||||||| |||| ||||||||||||||||||||||||||| ||
seq2  ACCTGGCAGTAATCAACCATTTTATCATGGCACCCTGATTTTTATTTAAT  750

seq1  TTGTGTCCTAGTACAGGCCATTCAATGGATATTGACAAAATGACCTCTGT  794
      |||||  |||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGTCTAGTACAGGCCATTCAATGGATATTGACAAAATGACCTCTGT  800

seq1  GTTCTATAC-ATTGATTATACCCATGCTTAACCCCTTGATATACAGTCTC  843
      ||||||||| || |||||||||||||||||||||||||||||||||||||
seq2  GTTCTATACAATGGATTATACCCATGCTTAACCCCTTGATATACAGTCTC  850

seq1  AGGAACAAAAATGTCAAATTCGCCTTTAGAAAAATTATTAGCAAAAAATT  893
      |||||||||||||||||||||| ||||||||||  |||||||  ||||||
seq2  AGGAACAAAAATGTCAAATTCG-CTTTAGAAAA--TATTAGC--AAAATT  895

seq1  GTTTTTTTTAGTTATTTAAAGATGGGCTTCACATTAGGAAACTTCTTTAG  943
      | ||||||||||||||  ||||||||| ||||| |||  |||||||||||
seq2  G-TTTTTTTAGTTATT--AAGATGGGC-TCACA-TAG--AACTTCTTTAG  938

seq1  TTTTTCCATGTAAAAGTCTTAAAAGTCAGTTGAATATTTTGATTACCCAA  993
      ||||  |||||  ||||||   ||||||||     || |||| |||||||
seq2  TTTT--CATGT--AAGTCT---AAGTCAGT----GATATTGA-TACCCAA  976

seq1  T  994
      |
seq2  T  977