BAC Information

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BAC

Clone NameB6Ng01-037I23
Chromosome2 (Build37)
Map Location 97,156,116 - 97,246,220
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043267
Downstream geneLrrc4c, LOC621146, LOC664974
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037I23.bB6Ng01-037I23.g
ACCDH865389DH865390
length1,114983
definitionDH865389|Mus musculus domesticus DNA, BAC clone: B6Ng01-037I23, 5' end.DH865390|Mus musculus domesticus DNA, BAC clone: B6Ng01-037I23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,156,116 - 97,157,249)(97,245,243 - 97,246,220)
sequence
gaattctttaaaagaattccaatggttagtcaattgaaattcactagaac
tgtttaaaacataacatttgaaccatgaagaatatcttaggttggtttgc
tctcaagaactcagctgttttgattttccattttattatttcaaatggtg
caaaaatttcctgtatttacattttctgcaccatttatgtttcttttcaa
attacagaaatatgttagaaaaatagcaaactactctttaaactatgtgg
tctgaaaaaatttaaccactaactggaaggcagagagctatgaattatat
atttttttcttgtataaaagccagattataataggtcaagggtatagtta
gtgaattaatgtacaaaacatgtggggatatagttcttgataaatttgaa
caccctctctatcaggagatctttgttagttcatgctctatgcaagcact
agtctataaaagatgatgttttaggtttctcagctccaatttcaataagg
cccacttcagtttcagggatttatgtaaaggttaattaaagtgatttctt
aacctctctatgatgagtatacattgctgcgttgtaagctcctccataat
atgatgttaccacagtagtgatttcctgataaatgtctaataattaagtt
taatgaccaaaagaaaatatacaaatacatgtttctaataaattttctgg
ttataaaaatgcagattataattaaaagctatatacgtatgtatgaacct
atttactaaagaaataattaaatattacccatgatatattaaatttatgt
tattaaaaataaactgattttcattaaatattattactttttgaaaaatt
cttattaattttgacaaacatttacaaagaaactatttcattatagtaat
taatggcacaaatgtttgggtcttttatttattaaaaaaatactgagttt
tcttatagatgtacatttacagtggtgatgccatacgtgagaaccacctt
gagttatctacatcaatactctcatcactgcttaaaatcattgataaaca
agatggtccagcctaatttttagcattttcaatgtccagtagagtgaatt
taaattccccaagg
gaattcagaggcaatcagaggatgggtccccaagtcttccagagaacata
gtaaagactgaattttatttggaagactctttaacataagaccctttatg
tcttagcacagtctctggagatcctggattggagttatgctgggtattga
ctggggatgaacagaaattgtgatcttgtttgtaaagttataacactagc
tgtgaaaataaagtggcagtctacaatgatactttctcatgccaatgttt
ttgctggatagaagttttgtttattaatcatatttacaaaaccatattga
tcatctgtaagcaagtttgtgcctgtcccagaagcaattaagtttgatgt
catttcactgaattcagcctgactaagctatgcttcataacttccacctt
cctaaagctagacattgtactcttgcataattcatcaaactgtgggaacc
gtctcatattttccactcttaaatcctgtcacatctatttttaattttaa
caattgatacttcttaaaattccttttacatctcttttctcatgaattca
agctagtgtaacctaatattgactctcttttccatttgaaggtgtggcta
cttgggaacttatcttaacttctttttatcatcataattgagttctgacc
tccaaaggacttgtccataaagggagtaaataagattggcatgaaaaagt
ggtctgtaatcaagtatgttttgaaatcattgaactaaataatcagatcc
tatgcctccagggtagctcagaggaatgttggatattttttatgactctt
catgaggtgagatgaaattttgttgaatttattaaggttaatggactgtg
aaagccccccgcctccaccttttcttttaaaccatttcaagatggaatgt
cctgctgaattgctgaaaattatttccctaaggaaagtactgtgtaaata
ttatctaaataaacataccataaaacagcaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_97156116_97157249
seq2: B6Ng01-037I23.b_43_1156

seq1  GAATTCTTTAAAAGAATTCCAATGGTTAGTCAATTGAAATTCACTAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAAGAATTCCAATGGTTAGTCAATTGAAATTCACTAGAAC  50

seq1  TGTTTAAAACATAACATTTGAACCATGAAGAATATCTTAGGTTGGTTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAAACATAACATTTGAACCATGAAGAATATCTTAGGTTGGTTTGC  100

seq1  TCTCAAGAACTCAGCTGTTTTGATTTTCCATTTTATTATTTCAAATGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGAACTCAGCTGTTTTGATTTTCCATTTTATTATTTCAAATGGTG  150

seq1  CAAAAATTTCCTGTATTTACATTTTCTGCACCATTTATGTTTCTTTTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATTTCCTGTATTTACATTTTCTGCACCATTTATGTTTCTTTTCAA  200

seq1  ATTACAGAAATATGTTAGAAAAATAGCAAACTACTCTTTAAACTATGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGAAATATGTTAGAAAAATAGCAAACTACTCTTTAAACTATGTGG  250

seq1  TCTGAAAAAATTTAACCACTAACTGGAAGGCAGAGAGCTATGAATTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAAAATTTAACCACTAACTGGAAGGCAGAGAGCTATGAATTATAT  300

seq1  ATTTTTTTCTTGTATAAAAGCCAGATTATAATAGGTCAAGGGTATAGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTCTTGTATAAAAGCCAGATTATAATAGGTCAAGGGTATAGTTA  350

seq1  GTGAATTAATGTACAAAACATGTGGGGATATAGTTCTTGATAAATTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATTAATGTACAAAACATGTGGGGATATAGTTCTTGATAAATTTGAA  400

seq1  CACCCTCTCTATCAGGAGATCTTTGTTAGTTCATGCTCTATGCAAGCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCTCTATCAGGAGATCTTTGTTAGTTCATGCTCTATGCAAGCACT  450

seq1  AGTCTATAAAAGATGATGTTTTAGGTTTCTCAGCTCCAATTTCAATAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATAAAAGATGATGTTTTAGGTTTCTCAGCTCCAATTTCAATAAGG  500

seq1  CCCACTTCAGTTTCAGGGATTTATGTAAAGGTTAATTAAAGTGATTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTCAGTTTCAGGGATTTATGTAAAGGTTAATTAAAGTGATTTCTT  550

seq1  AACCTCTCTATGATGAGTATACATTGCTGCGTTGTAAGCTCCTCCATAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTCTATGATGAGTATACATTGCTGCGTTGTAAGCTCCTCCATAAT  600

seq1  ATGATGTTACCACAGTAGTGATTTCCTGATAAATGTCTAATAATTAAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTTACCACAGTAGTGATTTCCTGATAAATGTCTAATAATTAAGTT  650

seq1  TAATGACCAAAAGAAAATATACAAATACATGTTTCTAATAAATTTTCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACCAAAAGAAAATATACAAATACATGTTTCTAATAAATTTTCTGG  700

seq1  TTATAAAAATGCAGATTATAATTAAAAGCTATATACGTATGTATGAACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAAATGCAGATTATAATTAAAAGCTATATACGTATGTATGAACCT  750

seq1  ATTTACTAAAGAAATAATTAAATATTAACCATGATATATTAAATTTATGT  800
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATTTACTAAAGAAATAATTAAATATTACCCATGATATATTAAATTTATGT  800

seq1  TATTAAAAATAAACTGATTTTCATTAAATATTATTACTTTTTGAAAAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAAATAAACTGATTTTCATTAAATATTATTACTTTTTGAAAAATT  850

seq1  CTTATTAATTTTGACAAACATTTACAAAAGAAAACTATTTCATTATAGTA  900
      ||||||||||||||||||||||||||||   |||||||||||||||||||
seq2  CTTATTAATTTTGACAAACATTTACAAA--GAAACTATTTCATTATAGTA  898

seq1  ATTAATGGCACAAATGTTTGGTTCTTTTATTTAATTAAAAAAATACTGAG  950
      ||||||||||||||||||||| |||||||||| |||||||||||||||||
seq2  ATTAATGGCACAAATGTTTGGGTCTTTTATTT-ATTAAAAAAATACTGAG  947

seq1  TTTTTCTTTATTAGATGTACCATTTACAGT-GTGATGCCATACGTGAGAA  999
       |||||||   |||||||| |||||||||| |||||||||||||||||||
seq2  -TTTTCTT--ATAGATGTA-CATTTACAGTGGTGATGCCATACGTGAGAA  993

seq1  CACACTTTGAAGTGTAATCTACATCAATACTTTCTTCATCACTGCTTTAA  1049
      | ||| ||||   || |||||||||||||||    ||||||||||||  |
seq2  C-CACCTTGA---GTTATCTACATCAATACT---CTCATCACTGCTT--A  1034

seq1  AAATACATGAATTAAACAAGATG--TCAGCCCTAAATTTTTAGCATTTTC  1097
      ||||   |||  |||||||||||   |||||   ||||||||||||||| 
seq2  AAATCATTGA--TAAACAAGATGGTCCAGCC--TAATTTTTAGCATTTT-  1079

seq1  CAATAGTCACAGTAGAGTAGATTATAAATCCCCAAGG  1134
      |||| ||| |||||||||  |||  || |||||||||
seq2  CAAT-GTC-CAGTAGAGTGAATTTAAATTCCCCAAGG  1114

seq1: chr2_97245243_97246220
seq2: B6Ng01-037I23.g_67_1049 (reverse)

seq1  GGTTGCTGTTTACTGGTATGTATAATTAGATAATATTTACA-AGTACTTT  49
      |||||||||||  |||||||| || |||||||||||||||| ||||||||
seq2  GGTTGCTGTTTTATGGTATGTTTATTTAGATAATATTTACACAGTACTTT  50

seq1  CC-TAAGGAAATAATTTTCAGCAATTCAGCAGGACATT-CATCTTGAAAT  97
      || || |||||||||||||||||||||||||||||||| |||||||||||
seq2  CCTTAGGGAAATAATTTTCAGCAATTCAGCAGGACATTCCATCTTGAAAT  100

seq1  GGTTTATAAAGAAAAGGTGGAGGC-GGGGGCTTTCACAGTCCATTAACTT  146
      |||||| ||||||||||||||||| ||||||||||||||||||||||| |
seq2  GGTTTA-AAAGAAAAGGTGGAGGCGGGGGGCTTTCACAGTCCATTAACCT  149

seq1  TAATAAATTCAAC-AAATATCATCTCACCTCATGAAGAGTCATAAAAAAT  195
      ||||||||||||| |||| |||||||||||||||||||||||||||||||
seq2  TAATAAATTCAACAAAATTTCATCTCACCTCATGAAGAGTCATAAAAAAT  199

seq1  ATCCAACATT-CTCTGAGCTACCCTGGAGGCATAGGATCTGATTATTTAG  244
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATCCAACATTCCTCTGAGCTACCCTGGAGGCATAGGATCTGATTATTTAG  249

seq1  TTCAATGATTTCAAAACATACTTGATTACAGACCACTTTTTCATGCCAAT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGATTTCAAAACATACTTGATTACAGACCACTTTTTCATGCCAAT  299

seq1  CTTATTTACTCCCTTTATGGACAAGTCCTTTGGAGGTCAGAACTCAATTA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTACTCCCTTTATGGACAAGTCCTTTGGAGGTCAGAACTCAATTA  349

seq1  TGATGATAAAAAGAAGTTAAGATAAGTTCCCAAGTAGCCACACCTTCAAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATAAAAAGAAGTTAAGATAAGTTCCCAAGTAGCCACACCTTCAAA  399

seq1  TGGAAAAGAGAGTCAATATTAGGTTACACTAGCTTGAATTCATGAGAAAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAGAGAGTCAATATTAGGTTACACTAGCTTGAATTCATGAGAAAA  449

seq1  GAGATGTAAAAGGAATTTTAAGAAGTATCAATTGTTAAAATTAAAAATAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTAAAAGGAATTTTAAGAAGTATCAATTGTTAAAATTAAAAATAG  499

seq1  ATGTGACAGGATTTAAGAGTGGAAAATATGAGACGGTTCCCACAGTTTGA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACAGGATTTAAGAGTGGAAAATATGAGACGGTTCCCACAGTTTGA  549

seq1  TGAATTATGCAAGAGTACAATGTCTAGCTTTAGGAAGGTGGAAGTTATGA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTATGCAAGAGTACAATGTCTAGCTTTAGGAAGGTGGAAGTTATGA  599

seq1  AGCATAGCTTAGTCAGGCTGAATTCAGTGAAATGACATCAAACTTAATTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGCTTAGTCAGGCTGAATTCAGTGAAATGACATCAAACTTAATTG  649

seq1  CTTCTGGGACAGGCACAAACTTGCTTACAGATGATCAATATGGTTTTGTA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGGACAGGCACAAACTTGCTTACAGATGATCAATATGGTTTTGTA  699

seq1  AATATGATTAATAAACAAAACTTCTATCCAGCAAAAACATTGGCATGAGA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGATTAATAAACAAAACTTCTATCCAGCAAAAACATTGGCATGAGA  749

seq1  AAGTATCATTGTAGACTGCCACTTTATTTTCACAGCTAGTGTTATAACTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATCATTGTAGACTGCCACTTTATTTTCACAGCTAGTGTTATAACTT  799

seq1  TACAAACAAGATCACAATTTCTGTTCATCCCCAGTCAATACCCAGCATAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACAAGATCACAATTTCTGTTCATCCCCAGTCAATACCCAGCATAA  849

seq1  CTCCAATCCAGGATCTCCAGAGACTGTGCTAAGACATAAAGGGTCTTATG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAATCCAGGATCTCCAGAGACTGTGCTAAGACATAAAGGGTCTTATG  899

seq1  TTAAAGAGTCTTCCAAATAAAATTCAGTCTTTACTATGTTCTCTGGAAGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAGTCTTCCAAATAAAATTCAGTCTTTACTATGTTCTCTGGAAGA  949

seq1  CTTGGGGACCCATCCTCTGATTGCCTCTGAATTC  978
      ||||||||||||||||||||||||||||||||||
seq2  CTTGGGGACCCATCCTCTGATTGCCTCTGAATTC  983