BAC Information

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BAC

Clone NameB6Ng01-037N14
Chromosome2 (Build37)
Map Location 118,333,490 - 118,466,769
singlet/doubletdoublet
Overlap geneBmf, LOC640461, Bub1b
Upstream geneThbs1, Fsip1, Gpr176, 1700054M17Rik, Eif2ak4, Srp14, LOC668859
Downstream genePak6, Gm1337, Plcb2, LOC100043272, A430105I19Rik, Disp2, D2Ertd750e, Ivd, Bahd1, Chst14, LOC677379, Ccdc32, Rpusd2, Casc5, Rad51, 1200015F23Rik, Gchfr, Dnajc17, OTTMUSG00000015762, LOC545640, Zfyve19, Ppp1r14d, Spint1, Rhov, Vps18, LOC100043609, Dll4, Chac1, Inoc1, LOC100043612, Exdl1, 1500003O03Rik, LOC100043307, Oip5, Nusap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037N14.bB6Ng01-037N14.g
ACCDH865589DH865590
length1,129690
definitionDH865589|Mus musculus domesticus DNA, BAC clone: B6Ng01-037N14, 5' end.DH865590|Mus musculus domesticus DNA, BAC clone: B6Ng01-037N14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,465,618 - 118,466,769)(118,333,490 - 118,334,183)
sequence
gaattctttctgggtttaactcagcaggacactaacatgccaaagtgata
tatggtaataccaagaactctaagattggagatcattcaaacactcttga
aggcacagggaagaactacaaaaatcagtctgctgtggtggccctgaaca
cacatggaagaaggaaatccactctcgcctgagcccatggatcctggcca
ctccggtgcagtgacacccgctagcacttatccacacacagtcaaagaaa
aagaaacttcgttccctgccagttttctcactgcaggtcatgacaacatc
ccctcacctcaggctccgccatcctcagttctctgacgtccaaccttggt
taaggtgccttgctcttactctccttctcttatctgaaaactcgcactgc
tgtagagcagggggttgacaaaggcgggcccagccatctatttttgcttg
tgtccattaaccacaccagcaggtccacagctagaccaagatgcctctta
gccctgcacatctcaaagtacccttcagcaatctcattaacttatctatt
tctgttgctgtctgagacaatgtctcactgtgtagctctggctggcctcg
agcctctgccttccatgggctggggttaaaggcctgagctggcaagtcag
gatcaaacctatcttaaaaatacatgcaggagacaaatttccgaatcaaa
tgaggaaaatacaacttagtgttctggagatgaaagcagggaagggacat
tcagtcttcaacactgatctaaaatgaaaaccaactttagaactggcatg
cagtgcgtcactacttggtgagcctatgctgggaagccattggcgctatg
taagtgtctgacaattcccaagcagacctgagagatcacttatttctgca
ccaggagactgctcggtggtttggttctaccttatcatttatagatataa
tctaaactcagtataccatgtggaaacttaactctcaaaagacacgactt
ttgataacacagctgttaaaagactacaccaattgggtagaaacttatct
ctaagtgtttctatttctagctaagaatgcctaagtctgagcagtctatg
ttctttttcacctgccattctttcctgtc
gaattccaggacaaccagggctacacagagaaaccctgatgccaaaaacc
agaaaagaaaagtgttaaagttttagtctgcccatggaagatgcaggcaa
gagaatcaggagttcaagtccctcctggggtgggggtgggggcagtaatg
aatccaacatcactgcgcttgcagaagacttaagtttagttcctgccaca
cacctggcagcttataactgcctgtaattctaactgtagaggatcagatg
ccctcttttggattctaagggcacctgtattcacatgtgtacattcctgc
agacacacacacacacaccccacaccctccacatacgcacacagttaaaa
ataaaataaaactttcattatttttattaaaccaaagaaacaaaacaccc
acaaatgatcatgtacacctttaatcttagcactcaggagacagaggcag
gcagatctctgaattcaatgccagcatggtctacagagctgttgggttca
aggtggaagccaagaaaattcgctttagatttggaagcttcaagtgaaag
ctttattttctgagtgttcagggaagcagccagcttgggatcggcacctt
gtcctaaagggagactgtacaacatttttataggatgggaacacaaatga
ggtgagcagcattgtgggctgttgcgtttaccaacatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_118465618_118466769
seq2: B6Ng01-037N14.b_48_1176 (reverse)

seq1  GACAGGGAAAGGAATGGCCAGCTGAAAATAAGACATAGACCTGCTCAGAC  50
      ||||||  || |||||| ||| |||||| |  ||||||| ||||||||||
seq2  GACAGG--AAAGAATGG-CAGGTGAAAA-AGAACATAGA-CTGCTCAGAC  45

seq1  TTTAGGGCATTTCTTAGCTTAGAAATAGAAACACTTTAGAGGAATAAGTT  100
      ||   |||| |||||||| ||||||||||||||| ||||||  ||||| |
seq2  TT--AGGCA-TTCTTAGC-TAGAAATAGAAACAC-TTAGAG--ATAAG-T  87

seq1  TTCTAACCAATTGGTGTTAGTCTTTTTAACAGCTGTGTTTATCAAAAGTC  150
      ||||| |||||||||| ||||| |||||||||||||| ||||||||||||
seq2  TTCTACCCAATTGGTG-TAGTC-TTTTAACAGCTGTG-TTATCAAAAGTC  134

seq1  GGTTGTCTTTTGAAGAGTTAAGTTTCCACATGGTATACTGAGTTTAGATT  200
      |  ||||||||| |||||||||||||||||||||||||||||||||||||
seq2  G--TGTCTTTTG-AGAGTTAAGTTTCCACATGGTATACTGAGTTTAGATT  181

seq1  ATTATCTATTAAATGATAAGGTAGAACCAAACCACCGAGCAGTCTCCTGG  250
      | |||||| |||||||||||||||||||||||||||||||||||||||||
seq2  A-TATCTA-TAAATGATAAGGTAGAACCAAACCACCGAGCAGTCTCCTGG  229

seq1  TGCAGAAATAAGTGATCTCTCAGGTCTGCTTGGGAATTTGTCAGACACCT  300
      |||||||||||||||||||||||||||||||||||| |||||||||| ||
seq2  TGCAGAAATAAGTGATCTCTCAGGTCTGCTTGGGAA-TTGTCAGACA-CT  277

seq1  TACATAGCGCCAATGGCTTCCCAGCATAGGCTCACCAAGTAGTGACGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGCGCCAATGGCTTCCCAGCATAGGCTCACCAAGTAGTGACGCAC  327

seq1  TGCATGCCAGTTCTAAAGTTGGTTTTCATTTTAGATCAGTGTTGAAGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCCAGTTCTAAAGTTGGTTTTCATTTTAGATCAGTGTTGAAGACT  377

seq1  GAATGTCCCTTCCCTGCTTTCATCTCCAGAACACTAAGTTGTATTTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTCCCTTCCCTGCTTTCATCTCCAGAACACTAAGTTGTATTTTCCT  427

seq1  CATTTGATTCGGAAATTTGTCTCCTGCATGTATTTTTAAGATAGGTTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGATTCGGAAATTTGTCTCCTGCATGTATTTTTAAGATAGGTTTGA  477

seq1  TCCTGACTTGCCAGCTCAGGCCTTTAACCCCAGCCCATGGAAGGCAGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGACTTGCCAGCTCAGGCCTTTAACCCCAGCCCATGGAAGGCAGAGG  527

seq1  CTCGAGGCCAGCCAGAGCTACACAGTGAGACATTGTCTCAGACAGCAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAGGCCAGCCAGAGCTACACAGTGAGACATTGTCTCAGACAGCAACA  577

seq1  GAAATAGATAAGTTAATGAGATTGCTGAAGGGTACTTTGAGATGTGCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGATAAGTTAATGAGATTGCTGAAGGGTACTTTGAGATGTGCAGG  627

seq1  GCTAAGAGGCATCTTGGTCTAGCTGTGGACCTGCTGGTGTGGTTAATGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAGGCATCTTGGTCTAGCTGTGGACCTGCTGGTGTGGTTAATGGA  677

seq1  CACAAGCAAAAATAGATGGCTGGGCCCGCCTTTGTCAACCCCCTGCTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCAAAAATAGATGGCTGGGCCCGCCTTTGTCAACCCCCTGCTCTA  727

seq1  CAGCAGTGCGAGTTTTCAGATAAGAGAAGGAGAGTAAGAGCAAGGCACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTGCGAGTTTTCAGATAAGAGAAGGAGAGTAAGAGCAAGGCACCT  777

seq1  TAACCAAGGTTGGACGTCAGAGAACTGAGGATGGCGGAGCCTGAGGTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAAGGTTGGACGTCAGAGAACTGAGGATGGCGGAGCCTGAGGTGAG  827

seq1  GGGATGTTGTCATGACCTGCAGTGAGAAAACTGGCAGGGAACGAAGTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGTTGTCATGACCTGCAGTGAGAAAACTGGCAGGGAACGAAGTTTC  877

seq1  TTTTTCTTTGACTGTGTGTGGATAAGTGCTAGCGGGTGTCACTGCACCGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTGACTGTGTGTGGATAAGTGCTAGCGGGTGTCACTGCACCGG  927

seq1  AGTGGCCAGGATCCATGGGCTCAGGCGAGAGTGGATTTCCTTCTTCCATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCCAGGATCCATGGGCTCAGGCGAGAGTGGATTTCCTTCTTCCATG  977

seq1  TGTGTTCAGGGCCACCACAGCAGACTGATTTTTGTAGTTCTTCCCTGTGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCAGGGCCACCACAGCAGACTGATTTTTGTAGTTCTTCCCTGTGC  1027

seq1  CTTCAAGAGTGTTTGAATGATCTCCAATCTTAGAGTTCTTGGTATTACCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGAGTGTTTGAATGATCTCCAATCTTAGAGTTCTTGGTATTACCA  1077

seq1  TATATCACTTTGGCATGTTAGTGTCCTGCTGAGTTAAACCCAGAAAGAAT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCACTTTGGCATGTTAGTGTCCTGCTGAGTTAAACCCAGAAAGAAT  1127

seq1  TC  1152
      ||
seq2  TC  1129

seq1: chr2_118333490_118334183
seq2: B6Ng01-037N14.g_69_758

seq1  GAATTCCAGGACAACCAGGGCTACACAGAGAAACCCTGATGCCAAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAACCAGGGCTACACAGAGAAACCCTGATGCCAAAAACC  50

seq1  AGAAAAGAAAAGTGTTAAAGTTTTAGTCTGCCCATGGAAGATGCAGGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAAAAGTGTTAAAGTTTTAGTCTGCCCATGGAAGATGCAGGCAA  100

seq1  GAGAATCAGGAGTTCAAGTCCCTCCTGGGGTGGGGGTGGGGGCAGTAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCAGGAGTTCAAGTCCCTCCTGGGGTGGGGGTGGGGGCAGTAATG  150

seq1  AATCCAACATCACTGCGCTTGCAGAAGACTTAAGTTTAGTTCCTGCCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAACATCACTGCGCTTGCAGAAGACTTAAGTTTAGTTCCTGCCACA  200

seq1  CACCTGGCAGCTTATAACTGCCTGTAATTCTAACTGTAGAGGATCAGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGCAGCTTATAACTGCCTGTAATTCTAACTGTAGAGGATCAGATG  250

seq1  CCCTCTTTTGGATTCTAAGGGCACCTGTATTCACATGTGTACATTCCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTTTGGATTCTAAGGGCACCTGTATTCACATGTGTACATTCCTGC  300

seq1  AGACACACACACACACACCCCACACCCTCCACATACGCACACAGTTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACACACACACACCCCACACCCTCCACATACGCACACAGTTAAAA  350

seq1  ATAAAATAAAACTTTCATTATTTTTATTAAACCAAAGAAACAAAACACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAAAACTTTCATTATTTTTATTAAACCAAAGAAACAAAACACCC  400

seq1  ACAAATGATCATGTACACCTTTAATCTTAGCACTCAGGAGACAGAGGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGATCATGTACACCTTTAATCTTAGCACTCAGGAGACAGAGGCAG  450

seq1  GCAGATCTCTGAATTCAAGGCCAGCATGGTCTACAGAGCTGTTGGGTTCA  500
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCAGATCTCTGAATTCAATGCCAGCATGGTCTACAGAGCTGTTGGGTTCA  500

seq1  AGGTGGAAGCCAAGAAAATTCGCTTTAGATTTGGAAGCTTCAAGTGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGAAGCCAAGAAAATTCGCTTTAGATTTGGAAGCTTCAAGTGAAAG  550

seq1  CTTTATTTTCTGAGTGTTCAGGGAAGCAGCCAGCTTGGGATCGGCACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTTCTGAGTGTTCAGGGAAGCAGCCAGCTTGGGATCGGCACCTT  600

seq1  GTCCTCAAAGGGAGACTGTACAACATTTTTATAGGATGGGAACACAAAAT  650
      ||||| ||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTCCT-AAAGGGAGACTGTACAACATTTTTATAGGATGGGAACAC-AAAT  648

seq1  GAGGAGGAGCAGCAGTGTGGGCTGTTGCGTTGACCAATCATATT  694
      ||||  |||||||| |||||||||||||||| ||||| ||||||
seq2  GAGG-TGAGCAGCATTGTGGGCTGTTGCGTTTACCAA-CATATT  690