BAC Information

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BAC

Clone NameB6Ng01-037P10
Chromosome2 (Build37)
Map Location 165,295,183 - 165,423,612
singlet/doubletdoublet
Overlap geneSlc13a3, 2810408M09Rik, Slc2a10
Upstream gene1700126L10Rik, Dbndd2, Pigt, LOC670507, Wfdc2, OTTMUSG00000016288, Wfdc6a, Spinlw1, Wfdc8, Wfdc6b, Wfdc16, OTTMUSG00000001088, Wfdc10, LOC629761, Wfdc13, Spint4, OTTMUSG00000016293, Wfdc3, Dnttip1, Ube2c, Tnnc2, Snx21, Acot8, Zswim3, Zswim1, 1700020C07Rik, Neurl2, Ctsa, Pltp, F730014I05Rik, Zfp335, LOC629777, Mmp9, Slc12a5, Ncoa5, Cd40, Cdh22, Slc35c2, Elmo2, Gm1008, Zfp334, 4833422F24Rik
Downstream geneEya2, Prkcbp1, LOC546780, Ncoa3, Sulf2, LOC670775, Ppia-ps2_2197.1, BC067047
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037P10.bB6Ng01-037P10.g
ACCDH865671DH865672
length1,106824
definitionDH865671|Mus musculus domesticus DNA, BAC clone: B6Ng01-037P10, 5' end.DH865672|Mus musculus domesticus DNA, BAC clone: B6Ng01-037P10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(165,295,183 - 165,296,287)(165,422,795 - 165,423,612)
sequence
gaattcacagcccactgagatagggatcccttgcctaccaagaaggaaag
gagactcagacattctgccttcaagcccagagccatctcctctattcctt
catcttagggcccctattcatccatcactaatgctccctgagcctcggtt
tcccttatctgacaatgtaagtaccccccattcttgaatattgagctcaa
aagtcacaaagccccatgtgtccatggtgattgtgccatgggacccaaag
gataaccaggaaggcagacagcatgtcagctgtgttgaaagggaggccca
tgggagccagtgacttgtctggatcacagagaagccctgatctcaaatcc
ccacaaacaggaaaggaaaagccttctcgtggccacccactggcaagaga
ctgagccaaagaaaagaaaggtaccttggggacccactaccccttaaaaa
gattgctgtccctgccccaggtcaagcctttccagaggacacctatgggc
aaattcagaagcagggagtgtccctagggggatccagctgtgccctaaga
cctggtttagccacagctgcagcttgctccgtgcaccacctgtgcaacct
tctgtctctgtccagcctggaacttccccagctgcccgtgcttagagcat
cttcagagtcacccagtggtgaagaactcacagccgccagggggccagag
cagctgtctgttccttgtggaaccagaggagaggaagctactcagccagc
agacgggctggtattaactcaaaagcagccacacccaccagctatgctgg
ccaccgatacactcccacctccagagatgggcctttggtgtgaaacacag
cagctcttaacttctgtccagagttgctggcacccctggggtcatggaaa
aagatgccctggggggtgggggaattctaggcctgggctggcatgttctt
tcccttctgcctcgcacctttaactcacagcattgtgctagaggccttct
gtcccaaacccagcttcacagtgggccagctgcttctggaccagtgacca
atgaacttagatatgtgtggcctgggtgtgaatctctagatatagaaagc
cagcgc
gaattctctcccttaaggaatttctgtctccctttgtatctggtgcccag
gtgagagtcaggtaaatgtatccctggccacgtgacaggaagcaacacac
acacacacacacacacacacacacacacacacacacacacccctcagggc
tttggacactgcctgaaagctagactgagcatcctttatgggcaggaggc
ctgcccagcaaggaccagcccctgatacaactccagttcacatcatcctc
ttagatgcaggggcttcagcagctgacccagctgagcaagacctctcccc
tcccttcctttcctgacagccattgcctgtttccctgctcagaaaggcat
ctgttgtgggtcaccctggaaccccactcgctctcagtgagggcctgttc
tttcgctgtatgacaagtttattgctggcttaatgagtttccaaaggggc
atcgcagctgaggacacccaacacacatctggtgatggtggtggggacag
agaaagagttctcgtcctgagctcagcttgcgctggtgacagttggacgg
ctggctgcttagtcctggtctactcccggcacaaattatctttgggaaaa
aaaggctgaaaaaaaaataaggaaatgatttcttcttttgtgggatggag
tcatattgtcgtggggggaaacatcttaagtggatgtgcctggactgtgt
ataaggtttttcaaactgcccagaatctccacagcgtattcaaccccaat
tctgaagtggccggctacgccgcagacccttttttattgggggcttttcc
actctccccgacagcagctagaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_165295183_165296287
seq2: B6Ng01-037P10.b_44_1149

seq1  GAATTCACAGCCCACTGAGATAGGGATCCCTTGCCTACCAAGAAGGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCCCACTGAGATAGGGATCCCTTGCCTACCAAGAAGGAAAG  50

seq1  GAGACTCAGACATTCTGCCTTCAAGCCCAGAGCCATCTCCTCTATTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTCAGACATTCTGCCTTCAAGCCCAGAGCCATCTCCTCTATTCCTT  100

seq1  CATCTTAGGGCCCCTATTCATCCATCACTAATGCTCCCTGAGCCTCGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTAGGGCCCCTATTCATCCATCACTAATGCTCCCTGAGCCTCGGTT  150

seq1  TCCCTTATCTGACAATGTAAGTACCCCCCATTCTTGAATATTGAGCTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTATCTGACAATGTAAGTACCCCCCATTCTTGAATATTGAGCTCAA  200

seq1  AAGTCACAAAGCCCCATGTGTCCATGGTGATTGTGCCATGGGACCCAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACAAAGCCCCATGTGTCCATGGTGATTGTGCCATGGGACCCAAAG  250

seq1  GATAACCAGGAAGGCAGACAGCATGTCAGCTGTGTTGAAAGGGAGGCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACCAGGAAGGCAGACAGCATGTCAGCTGTGTTGAAAGGGAGGCCCA  300

seq1  TGGGAGCCAGTGACTTGTCTGGATCACAGAGAAGCCCTGATCTCAAATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCCAGTGACTTGTCTGGATCACAGAGAAGCCCTGATCTCAAATCC  350

seq1  CCACAAACAGGAAAGGAAAAGCCTTCTCGTGGCCACCCACTGGCAAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAACAGGAAAGGAAAAGCCTTCTCGTGGCCACCCACTGGCAAGAGA  400

seq1  CTGAGCCAAAGAAAAGAAAGGTACCTTGGGGACCCACTACCCCTTAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCAAAGAAAAGAAAGGTACCTTGGGGACCCACTACCCCTTAAAAA  450

seq1  GATTGCTGTCCCTGCCCCAGGTCAAGCCTTTCCAGAGGACACCTATGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCTGTCCCTGCCCCAGGTCAAGCCTTTCCAGAGGACACCTATGGGC  500

seq1  AAATTCAGAAGCAGGGAGTGTCCCTAGGGGGATCCAGCTGTGCCCTAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAGAAGCAGGGAGTGTCCCTAGGGGGATCCAGCTGTGCCCTAAGA  550

seq1  CCTGGTTTAGCCACAGCTGCAGCTTGCTCCGTGCACCACCTGTGCAACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTTAGCCACAGCTGCAGCTTGCTCCGTGCACCACCTGTGCAACCT  600

seq1  TCTGTCTCTGTCCAGCCTGGAACTTCCCCAGCTGCCCGTGCTTAGAGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCTGTCCAGCCTGGAACTTCCCCAGCTGCCCGTGCTTAGAGCAT  650

seq1  CTTCAGAGTCACCCAGTGGTGAAGAACTCACAGCCGCCAGGGGGCCAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAGTCACCCAGTGGTGAAGAACTCACAGCCGCCAGGGGGCCAGAG  700

seq1  CAGCTGTCTGTTCCTTGTGGAACCAGAGGAGAGGAAGCTACTCAGCCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTCTGTTCCTTGTGGAACCAGAGGAGAGGAAGCTACTCAGCCAGC  750

seq1  AGACGGGCTGGTATTAACTCAAAAGCAGCCACACCCACCAGCTATGCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGGGCTGGTATTAACTCAAAAGCAGCCACACCCACCAGCTATGCTGG  800

seq1  CCACCGATACACTCCCACCTCCAGAGAT-GGCCTTTGGTGGGAAACACAG  849
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  CCACCGATACACTCCCACCTCCAGAGATGGGCCTTTGGTGTGAAACACAG  850

seq1  CAGCTCTTAACTTCTGTCCAGAGTTGCTGGCAACCCCTGGGGTCATGGAA  899
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CAGCTCTTAACTTCTGTCCAGAGTTGCTGGC-ACCCCTGGGGTCATGGAA  899

seq1  AAAGATGCCCTGGGGGGT-GGGGAATTCTAGGCCTGGGCTTGGCATGTTC  948
      |||||||||||||||||| |||||||||||||||||||| ||||||||||
seq2  AAAGATGCCCTGGGGGGTGGGGGAATTCTAGGCCTGGGC-TGGCATGTTC  948

seq1  TTTCCCTCCTGCCTCGCACC-TTGACTCACAGCA-TGTGCTAGGAGCCTC  996
      ||||||| |||||||||||| || |||||||||| ||||||||  |||| 
seq2  TTTCCCTTCTGCCTCGCACCTTTAACTCACAGCATTGTGCTAGAGGCCT-  997

seq1  TCTGTCCCCAACCCCAGCTTTCCACAGTGGGCCAGCGCCTTCTGGACCAG  1046
      ||||| ||||| ||||||||  ||||||||||||||  ||||||||||||
seq2  TCTGT-CCCAAACCCAGCTT--CACAGTGGGCCAGCTGCTTCTGGACCAG  1044

seq1  TGACCCATGAACATCAGA-ATGTGTGGCCTGG--GTGGATCAC-AGAGAT  1092
      ||||| |||||| | ||| |||||||||||||  ||| ||| | ||| ||
seq2  TGACCAATGAAC-TTAGATATGTGTGGCCTGGGTGTGAATCTCTAGATAT  1093

seq1  AGAAAGCCAGCGC  1105
      |||||||||||||
seq2  AGAAAGCCAGCGC  1106

seq1: chr2_165422795_165423612
seq2: B6Ng01-037P10.g_71_894 (reverse)

seq1  ATGCTAGCTGCTGTC-GGGAGAGTGGAAAAGCCCACAGT-AAAACGGGTC  48
      || |||||||||||| |||||||||||||||||| || | |||| |||||
seq2  ATTCTAGCTGCTGTCGGGGAGAGTGGAAAAGCCCCCAATAAAAAAGGGTC  50

seq1  TGCGGCGTAGCCGGCCACTTTCAGAATT-GGGTTGAATACGCTGTGGAGA  97
      |||||||||||||||||| ||||||||| |||||||||||||||||||||
seq2  TGCGGCGTAGCCGGCCAC-TTCAGAATTGGGGTTGAATACGCTGTGGAGA  99

seq1  TTCT-GGCAGTTTGAAAAACCTTATACACAGTCCAGGCACATCCACTTAA  146
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGCAGTTTGAAAAACCTTATACACAGTCCAGGCACATCCACTTAA  149

seq1  GATGTTT-CCCCCACGACAATATGACTCCATCCCAC-AAAGAAGAAATCA  194
      ||||||| |||||||||||||||||||||||||||| |||||||||||||
seq2  GATGTTTCCCCCCACGACAATATGACTCCATCCCACAAAAGAAGAAATCA  199

seq1  TTTCCTTATTTTTTTTTCAGCC-TTTTTTCCCAAAGATAATTTGTGCCGG  243
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTTCCTTATTTTTTTTTCAGCCTTTTTTTCCCAAAGATAATTTGTGCCGG  249

seq1  GAGTAGACCAGGACTAAGCAGCCAGCCGTCCAACTGTCACCAGCGCAAGC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGACCAGGACTAAGCAGCCAGCCGTCCAACTGTCACCAGCGCAAGC  299

seq1  TGAGCTCAGGACGAGAACTCTTTCTCTGTCCCCACCACCATCACCAGATG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCAGGACGAGAACTCTTTCTCTGTCCCCACCACCATCACCAGATG  349

seq1  TGTGTTGGGTGTCCTCAGCTGCGATGCCCCTTTGGAAACTCATTAAGCCA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGGGTGTCCTCAGCTGCGATGCCCCTTTGGAAACTCATTAAGCCA  399

seq1  GCAATAAACTTGTCATACAGCGAAAGAACAGGCCCTCACTGAGAGCGAGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAAACTTGTCATACAGCGAAAGAACAGGCCCTCACTGAGAGCGAGT  449

seq1  GGGGTTCCAGGGTGACCCACAACAGATGCCTTTCTGAGCAGGGAAACAGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTCCAGGGTGACCCACAACAGATGCCTTTCTGAGCAGGGAAACAGG  499

seq1  CAATGGCTGTCAGGAAAGGAAGGGAGGGGAGAGGTCTTGCTCAGCTGGGT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGCTGTCAGGAAAGGAAGGGAGGGGAGAGGTCTTGCTCAGCTGGGT  549

seq1  CAGCTGCTGAAGCCCCTGCATCTAAGAGGATGATGTGAACTGGAGTTGTA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCTGAAGCCCCTGCATCTAAGAGGATGATGTGAACTGGAGTTGTA  599

seq1  TCAGGGGCTGGTCCTTGCTGGGCAGGCCTCCTGCCCATAAAGGATGCTCA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGCTGGTCCTTGCTGGGCAGGCCTCCTGCCCATAAAGGATGCTCA  649

seq1  GTCTAGCTTTCAGGCAGTGTCCAAAGCCCTGAGGGGTGTGTGTGTGTGTG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGCTTTCAGGCAGTGTCCAAAGCCCTGAGGGGTGTGTGTGTGTGTG  699

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCTTCCTGTCACGTGGCC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCTTCCTGTCACGTGGCC  749

seq1  AGGGATACATTTACCTGACTCTCACCTGGGCACCAGATACAAAGGGAGAC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATACATTTACCTGACTCTCACCTGGGCACCAGATACAAAGGGAGAC  799

seq1  AGAAATTCCTTAAGGGAGAGAATTC  818
      |||||||||||||||||||||||||
seq2  AGAAATTCCTTAAGGGAGAGAATTC  824