BAC Information

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BAC

Clone NameB6Ng01-038A13
Chromosome2 (Build37)
Map Location 87,318,977 - 87,398,105
singlet/doubletdoublet
Overlap genePramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038
Upstream geneOlfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126
Downstream geneLOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038A13.bB6Ng01-038A13.g
ACCDH865725DH865726
length1,0081,104
definitionDH865725|Mus musculus domesticus DNA, BAC clone: B6Ng01-038A13, 5' end.DH865726|Mus musculus domesticus DNA, BAC clone: B6Ng01-038A13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,397,571 - 87,398,105)(87,318,977 - 87,320,093)
sequence
gaattcctgctttgaccagattctcggcctgggtgtgtttgttttgggcc
atcaatacttgccatcctgctcagccccagagaggtccagatggacaggg
ttctctcctcttgcctgtacctgttggtagagagcctacacactcctagg
tgtcctaacatgcccaggatcaaaggatcaaaggtgccctgagcagatct
cgggtgctaactccacagccagtctcacaacacacagaagaagctccact
cccaggggctctaacatgcccatgaccacaagattccaggagctgggcta
caccaggatctcagggtcccagaggaatctggattcccaggagctctgac
acaaccagatctcaggatcacagagaaacctgaattctaagaagttctga
cataaccagaatcacagaaagtacaggctctaggcagatataacaagggc
acataacactagagataatcagatagcaagaggcaagcataagaacataa
gcaacagaaaccaaggttacttgtcatcatcagaaccaaattcttccatc
tagcaagtcctgggtgtagcatctcaatggaaaagcaagatttggatcta
aaagtcacttgtcatgatggtgacagaggattttaagaaggacataaata
actccctgaaagaaatacaggagaacacagataaacagctaaaatccctt
taaagaagaaaatcaaaagtcctttaaaaacacaatcaaacaggtgaagg
aaatgaacaaaaccatccaagatctaaaaatggaaatggaaacaataaag
aaatcacaaagggaaacaaccctggagttacaaaaacctaggaaagagat
caggagtcatagaggcaagcatcaccaacagaatataagagatataagag
agaatctcagtgtagaagatactatagaaaatattgacacaacagtctaa
gaaaatgctaaaggaaaaggctcaaacccaaaacatgtaggaaatcagga
catgatga
gaattctttgtttatctctgtatcccattttttttttaattgggttactt
ggttttttggaggttagcttcttgtgttctttatatattttggatattag
ctctgtatgtgatatggggttagtgacatttttcccccgttctgtatgtt
atcaatttgtccatacatggaagggtttgtggccccctgcacatatgtag
cagaggactgccttatctggcctcagtaggagaggatgagcctagtcctg
taaagacttgattcttcagggcagtggatgcccagagagcagcaccctct
cagagacaaaggggaaaggaaatgagttgaagaactcagggaggggagat
ctgaagcagggccaaatttatgatataaataaattaaaatgataacttaa
aaaaaagagtttgaatcatgaggatcagatgtccaaaaagctgtgtaata
aagcaaggctggattcttagttctctgtcagaaggtgttctaaaaaaaga
ccaacccagcacactgagtagagaaaaggaaataaagaatgatagctggt
ccaggcatgctaccagacacctttaaggcccgcatctgggaggcagaagg
cggctcttttcaatgagtttgaagcaaggcctacataaaaagtttcagga
tagctgggtatggtggcgcacgcctttaatcccagcacttgggaggcaga
ggaatgcagatgtctgagttccaggccagcctggtctacaaagtgagttc
caggacagccagggctatacagagaaaccctttctcaaaaaaaaaaaaaa
aaaaagtttcaggacacccaaaactctatgttaagaccctgcttcaagaa
cagaatgggatttgatacaggattgttggctcgcacttacccagatcatc
aggaaactgaataggtatcacctcttctggacaactagcaaccaatgagc
aagcatagctctgtacccttgcccttcagtgctctagggactgaggtgct
gatctctgtgaatcagactgccttgttacaagtggcttcagctagtcatg
tcaggtatctggatcagtctccacaaatttgtggcctggaaagatgacag
ctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87397571_87398105
seq2: B6Ng01-038A13.b_46_580 (reverse)

seq1  TTCTGATGATGACAAGTAACCTTGGTTTCTGTTGCTTATGTTCTTATGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATGATGACAAGTAACCTTGGTTTCTGTTGCTTATGTTCTTATGCT  50

seq1  TGCCTCTTGCTATCTGATTATCTCTAGTGTTATGTGCCCTTGTTATATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTTGCTATCTGATTATCTCTAGTGTTATGTGCCCTTGTTATATCT  100

seq1  GCCTAGAGCCTGTACTTTCTGTGATTCTGGTTATGTCAGAACTTCTTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGAGCCTGTACTTTCTGTGATTCTGGTTATGTCAGAACTTCTTAGA  150

seq1  ATTCAGGTTTCTCTGTGATCCTGAGATCTGGTTGTGTCAGAGCTCCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGTTTCTCTGTGATCCTGAGATCTGGTTGTGTCAGAGCTCCTGGG  200

seq1  AATCCAGATTCCTCTGGGACCCTGAGATCCTGGTGTAGCCCAGCTCCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGATTCCTCTGGGACCCTGAGATCCTGGTGTAGCCCAGCTCCTGG  250

seq1  AATCTTGTGGTCATGGGCATGTTAGAGCCCCTGGGAGTGGAGCTTCTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGTGGTCATGGGCATGTTAGAGCCCCTGGGAGTGGAGCTTCTTCT  300

seq1  GTGTGTTGTGAGACTGGCTGTGGAGTTAGCACCCGAGATCTGCTCAGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTGTGAGACTGGCTGTGGAGTTAGCACCCGAGATCTGCTCAGGGC  350

seq1  ACCTTTGATCCTTTGATCCTGGGCATGTTAGGACACCTAGGAGTGTGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTGATCCTTTGATCCTGGGCATGTTAGGACACCTAGGAGTGTGTAG  400

seq1  GCTCTCTACCAACAGGTACAGGCAAGAGGAGAGAACCCTGTCCATCTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTACCAACAGGTACAGGCAAGAGGAGAGAACCCTGTCCATCTGGA  450

seq1  CCTCTCTGGGGCTGAGCAGGATGGCAAGTATTGATGGCCCAAAACAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTGGGGCTGAGCAGGATGGCAAGTATTGATGGCCCAAAACAAACA  500

seq1  CACCCAGGCCGAGAATCTGGTCAAAGCAGGAATTC  535
      |||||||||||||||||||||||||||||||||||
seq2  CACCCAGGCCGAGAATCTGGTCAAAGCAGGAATTC  535

seq1: chr2_87318977_87320093
seq2: B6Ng01-038A13.g_65_1168

seq1  GAATTCTTTGTTTATCTCTGTATCCCATTTTTTTTTTAATTGGGTTACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTATCTCTGTATCCCATTTTTTTTTTAATTGGGTTACTT  50

seq1  GGTTTTTTGGAGGTTAGCTTCTTGTGTTCTTTATATATTTTGGATATTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTGGAGGTTAGCTTCTTGTGTTCTTTATATATTTTGGATATTAG  100

seq1  CTCTGTATGTGATATGGGGTTAGTGACATTTTTCCCCCGTTCTGTATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTATGTGATATGGGGTTAGTGACATTTTTCCCCCGTTCTGTATGTT  150

seq1  ATCAATTTGTCCATACATGGAAGGGTTTGTGGCCCCCTGCACATATGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTTGTCCATACATGGAAGGGTTTGTGGCCCCCTGCACATATGTAG  200

seq1  CAGAGGACTGCCTTATCTGGCCTCAGTAGGAGAGGATGAGCCTAGTCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGACTGCCTTATCTGGCCTCAGTAGGAGAGGATGAGCCTAGTCCTG  250

seq1  TAAAGACTTGATTCTTCAGGGCAGTGGATGCCCAGAGAGCAGCACCCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACTTGATTCTTCAGGGCAGTGGATGCCCAGAGAGCAGCACCCTCT  300

seq1  CAGAGACAAAGGGGAAAGGAAATGAGTTGAAGAACTCAGGGAGGGGAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACAAAGGGGAAAGGAAATGAGTTGAAGAACTCAGGGAGGGGAGAT  350

seq1  CTGAAGCAGGGCCAAATTTATGATATAAATAAATTAAAATGATAACTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCAGGGCCAAATTTATGATATAAATAAATTAAAATGATAACTTAA  400

seq1  AAAAAAGAGTTTGAATCATGAGGATCAGATGTCCAAAAAGCTGTGTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAGTTTGAATCATGAGGATCAGATGTCCAAAAAGCTGTGTAATA  450

seq1  AAGCAAGGCTGGATTCTTAGTTCTCTGTCAGAAGGTGTTCTAAAAAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGGCTGGATTCTTAGTTCTCTGTCAGAAGGTGTTCTAAAAAAAGA  500

seq1  CCAACCCAGCACACTGAGTAGAGAAAAGGAAATAAAGAATGATAGCTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCCAGCACACTGAGTAGAGAAAAGGAAATAAAGAATGATAGCTGGT  550

seq1  CCAGGCATGCTACCAGACACCTTTAAGGCCCGCATCTGGGAGGCAGAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCATGCTACCAGACACCTTTAAGGCCCGCATCTGGGAGGCAGAAGG  600

seq1  CGGCTCTTTTCAATGAGTTTGAAGCAAGGCCTACATAAAAAGTTTCAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTCTTTTCAATGAGTTTGAAGCAAGGCCTACATAAAAAGTTTCAGGA  650

seq1  TAGCTGGGTATGGTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGGGTATGGTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAGA  700

seq1  GGAATGCAGATGTCTGAGTTCCAGGCCAGCCTGGTCTACAAAGTGAGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGCAGATGTCTGAGTTCCAGGCCAGCCTGGTCTACAAAGTGAGTTC  750

seq1  CAGGACAGCCAGGGCTATACAGAGAAACCCTTTCTCAAAAAAAAAAAAAA  800
      ||||||||||||||||||||||||||||||||||||  ||||||||||||
seq2  CAGGACAGCCAGGGCTATACAGAGAAACCCTTTCTC--AAAAAAAAAAAA  798

seq1  AAAAAAAGTTTCAGGACACCCAAAACTCTATGTTAAGACCCTGCTTCAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGTTTCAGGACACCCAAAACTCTATGTTAAGACCCTGCTTCAAG  848

seq1  AACAGAATGGGATTTGATACAGGATTG-TGGCTCGCACTTACCCAGATCA  899
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AACAGAATGGGATTTGATACAGGATTGTTGGCTCGCACTTACCCAGATCA  898

seq1  TCAGGAAACTGAATAGGTATCACCTCTTCTGGACAAACTAGCAACCAATG  949
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCAGGAAACTGAATAGGTATCACCTCTTCTGGAC-AACTAGCAACCAATG  947

seq1  AGGCAAGCATAGCTCTGTACCCTTGCCCTTCAGTGCTCTAGGGACTGAGG  999
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-GCAAGCATAGCTCTGTACCCTTGCCCTTCAGTGCTCTAGGGACTGAGG  996

seq1  TGGCTGATCTCTGTGAATTCAGGACTGCCCTGGTTTACAAAGTGGCTTCC  1049
      | ||||||||||||||| ||| ||||||| ||  |||| |||||||||| 
seq2  T-GCTGATCTCTGTGAA-TCA-GACTGCCTTG--TTAC-AAGTGGCTTC-  1039

seq1  AGGCTAGTCATGTCAGGGTACTGAGATCCAGTCTCCACAAATATGTGGGC  1099
        |||||||||||||||   ||| ||| |||||||||||||| ||||| |
seq2  -AGCTAGTCATGTCAGGTATCTG-GAT-CAGTCTCCACAAATTTGTGGCC  1086

seq1  TGGAGAGATGACAGCTCA  1117
      |||| |||||||||||||
seq2  TGGAAAGATGACAGCTCA  1104