This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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Search Result
BAC
Clone Name
B6Ng01-039J20
Chromosome
2 (Build37)
Map Location
138,432,057 - 138,433,228
singlet/doublet
singlet
Overlap gene
none
Upstream gene
Btbd3
Downstream gene
LOC628103
,
C130053K05Rik
Link
Open Mouse BAC browser
Click to get alignment info.
name
Btbd3
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:228662
MGI:2385155
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs
name
LOC628103
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:628103
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins
pseudo
: _no_value
name
C130053K05Rik
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:228677
MGI:2444678
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Btbd3
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:70906456
GeneID:228662
MGI:2385155
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: BTB (POZ) domain containing 3
transcript_id
: NM_001025431.1
name
Btbd3
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:70906454
GeneID:228662
MGI:2385155
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: BTB (POZ) domain containing 3
transcript_id
: NM_145534.2
name
C130053K05Rik
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:142380049
GeneID:228677
MGI:2444678
definition
exception
: mismatches in transcription
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: RIKEN cDNA C130053K05 gene
transcript_id
: NM_175467.2
name
Btbd3
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:70906455
CCDS:CCDS16798.1
GeneID:228662
MGI:2385155
definition
GO_function
: GO:0005515 - protein binding [Evidence IEA]
codon_start
: 1
note
: isoform 1 is encoded by transcript variant 1
product
: BTB/POZ domain containing protein 3 isoform 1
protein_id
: NP_663509.2
name
Btbd3
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:70906457
CCDS:CCDS16799.1
GeneID:228662
MGI:2385155
definition
GO_function
: GO:0005515 - protein binding [Evidence IEA]
codon_start
: 1
note
: isoform 2 is encoded by transcript variant 2
product
: BTB/POZ domain containing protein 3 isoform 2
protein_id
: NP_001020602.1
name
C130053K05Rik
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:28202041
CCDS:CCDS16800.1
GeneID:228677
MGI:2444678
definition
GO_component
: GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO_function
: GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0004758 - serine C-palmitoyltransferase activity [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
GO_process
: GO:0009058 - biosynthesis [Evidence IEA]
codon_start
: 1
note
: novel protein similar to serine palmitoyltransferase, long chain base subunit 2 Sptlc2
product
: hypothetical protein LOC228677
protein_id
: NP_780676.1
name
LOC628103
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:628103
definition
number
: 2
pseudo
: _no_value
name
LOC628103
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:628103
definition
number
: 1
pseudo
: _no_value
clone name
MSMg01-353P19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-462M01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-512B10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-529E17
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-189F16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-231B10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-271L11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-079M20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-386B04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-207I15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-095K10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-095K11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-299P13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-325G03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-271H03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-525B05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-106M16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-321A01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-472G01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-168I20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-514D07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-376N16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-504K11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-494K24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-388H08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-391H21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-350I23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-199H23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-127P09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-427A16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-276N02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-330I10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-141L11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-502F20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-185N10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-428N18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-122M18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-350H19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-419K01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-425C09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-380M04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-089N02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-337A01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-383E09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-107J03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-494J23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-449B09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-369F01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-463O22
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-104O10
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-125M22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-490A02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-436J01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-167O13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-139A09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-114H01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-064E09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-185G18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-518N01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-542E08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-404O21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-411M03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-280B21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-273J22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-453H11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-091C15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-389D01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-504I09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-145N09
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-468P23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-175O24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-198N23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-118M18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-395H03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-344G17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-442M14
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-368M21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-296L03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-443I15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-106N24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-351L08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-122L04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-123H23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-439K22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-439M22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-148C17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-085C05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-278F05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-498L17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-471F17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-207C14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-207C15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-186H23
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-100E01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-125A09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-482J24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-522B09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-530J01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-395F02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-158E18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-327D21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-288H03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-358M17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-297P06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-511M11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-137B23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-288F01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-137P13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-383A07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-483G24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-491A20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-087N24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-113B06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-531P20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-428J18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-100D02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-496C13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-061C05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-387K03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-535B05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-336C09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-048F14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-445P04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-127F24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-063E01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-021E22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-323N11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-142O17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-030K16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-249M16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-030M24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-321L23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-013A20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-194P04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-280N13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-290B21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-222B15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-113M11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-132I13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-153L19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-035H11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-337P13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-251J07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-058N18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-219G13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-019B16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-191F21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-061F15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-192G22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-189P20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-031N12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-344F15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-269O03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-262B12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-262J14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-225E18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-125G11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-191N19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-318N19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-165B05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-039B10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-128O12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-087N10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-187J12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-184J17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-257K05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-039J20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-328K01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-019H17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-189I18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-145J21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-073N09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-140E06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-316K18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-167M05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-289F03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-140P10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-202N18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-042E18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-217O22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-236G01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-294N12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-191K18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-236P06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-348N23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-258G14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-113F19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-314J08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-003M19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-072O05
singlet/doublet
singlet
plural/unique
unique
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