BAC Information

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BAC

Clone NameB6Ng01-041P20
Chromosome2 (Build37)
Map Location 141,818,728 - 141,819,887
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC668913, LOC668914, Kif16b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041P20.bB6Ng01-041P20.g
ACCDH868493DH868494
length1,1881,153
definitionDH868493|Mus musculus domesticus DNA, BAC clone: B6Ng01-041P20, 5' end.DH868494|Mus musculus domesticus DNA, BAC clone: B6Ng01-041P20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttgtcatgaaggggtgattacagaga
aacaaataaccctattaaaattgaggtacagagctaaacaaagaattctc
aactggggaatactgagtggctgagaagcacctaaagaaatgttcaacat
ccttagtcatcagggaaatgcaaatcaaaacaaccctgagattccaccgc
acaccagtcagaatgaataagatcaaaaactcaggtgacagcagatgctg
gccaggatgtggagaaagaagaacactcgtgcattgctggtgggattgca
agctggtaaaaccactctggaaatcagtttggtggttcctcagaaaattg
gacatagtactaccttaggacccagatatatcactcctgggcatataacc
agaagatgctccaacatgtaataaggacacctactccactatgatcatag
cagccttatttataatagccagaagcaggaaagaacccagatgtccctct
acagaggaatggatacaaaacatttacacaatggagtactacccagctat
taaaagcaatgaattcatgaaattcttaggcaaatggatagaactagaaa
atatcttcctgagtgaggtaacccaatcacaaaagaacacacatggtatg
tactcactgataagtggttaatagctcagaagctcagaatacacatgata
acaatttgcaaaacacatgaatctcaagaagaaagaagaccaaagtatgg
atactttggtccttttttagaagggggaaaaatacccatgcaaggagata
cagggacaaagtgtggagcagagactgaaaggaaaggccatccagagact
gctctatcctggggatctatcccatatacagttactaaacccagatacta
ttatggatgccaacaagtggtttgcttgacagaagcctaatacagctatc
ttctgagaggctctgctagtgcctgacaaatactgacgtgatgctctcgc
caccattggactgagcacgggacttcaataaatagctagagaaagaccct
agactgatgggattgcatcccaagaaggaacaacatattgaccatccata
ctcccgaactccagggactacttacctactaatgattaccatggagggct
ctagtttctatgctgcctatgtgaaaaaataaatggct
gaattccataaactgactggagttttttctactctctctatatgcattct
ttttaaattttttgtaaaacaatcttagatgaaatgctagaactaaatat
ggtcatctctgaatgggagggtaatagatcaaaaaattttcatcacctga
gatgaggcctctattgtgttgtgcctatagactcccatgagataaaacct
tgaaaacagtgactagctggcatctacacctcctctcaactctactgccc
tgagattgtgaaaaattatgttttcctaatacatggcatttctgaaactt
tcatcgatacaatgaagtagaagtggaatcagagggcattaatttttaca
aagcctcacagtggatccatcccctgctttgtggtggaatgaatgcccag
acatggaatctgtgagtaataatagaaagtgtggttgagcctgtgaactc
cttgtctcaaaattagattctgaacatttgcagccattgctagagccttg
gcttgtactttacagaattattggactgaattatttcatttggtcccagt
gtgccttgtcaactgaaaatattgtcccagagagttaacaaaacaatatt
ttgtaaagaaatcattcctgcagggatagggaaacctgttggtaacctga
gtctctgaccagtgatatcaaacagacacaggctgggaaagatccagggt
tcactaagctgattaaatcacaaggaaatggcaaagcttaccccagcgcc
ctgaagcccagtctcctttggacctagaggaggtttgaaactgtgtgttt
ataattttttcctgcatagatgacagaatggacagtttaatgacttctca
ttgtggttgggcttagctttaaatgagaagttcttcattttccatgttct
agtacttacacatcccttggattatccttaaatactggggctgggtatag
attctagctcagttccaaatcagtatgttttaccacaatgcatgacacaa
tagcaatagtttgctttcctctttgtcttgagaggtaagagacatgtagc
tccttttttttccctgtattcattcactttccctagtgacataaacactt
gtggatgggtatcaccaaaccattccagtcctcactctcttcttcagata
aaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_141818728_141819887
seq2: B6Ng01-041P20.g_69_1221

seq1  GAATTCCATAAACTGACTGGAGTTTTTTCTACTCTCTCTATATGCATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAACTGACTGGAGTTTTTTCTACTCTCTCTATATGCATTCT  50

seq1  TTTTAAATTTTTTGTAAAACAATCTTAGATGAAATGCTAGAACTAAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATTTTTTGTAAAACAATCTTAGATGAAATGCTAGAACTAAATAT  100

seq1  GGTCATCTCTGAATGGGAGGGTAATAGATCAAAAAATTTTCATCACCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATCTCTGAATGGGAGGGTAATAGATCAAAAAATTTTCATCACCTGA  150

seq1  GATGAGGCCTCTATTGTGTTGTGCCTATAGACTCCCATGAGATAAAACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGCCTCTATTGTGTTGTGCCTATAGACTCCCATGAGATAAAACCT  200

seq1  TGAAAACAGTGACTAGCTGGCATCTACACCTCCTCTCAACTCTACTGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACAGTGACTAGCTGGCATCTACACCTCCTCTCAACTCTACTGCCC  250

seq1  TGAGATTGTGAAAAATTATGTTTTCCTAATACATGGCATTTCTGAAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTGTGAAAAATTATGTTTTCCTAATACATGGCATTTCTGAAACTT  300

seq1  TCATCGATACAATGAAGTAGAAGTGGAATCAGAGGGCATTAATTTTTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCGATACAATGAAGTAGAAGTGGAATCAGAGGGCATTAATTTTTACA  350

seq1  AAGCCTCACAGTGGATCCATCCCCTGCTTTGTGGTGGAATGAATGCCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCACAGTGGATCCATCCCCTGCTTTGTGGTGGAATGAATGCCCAG  400

seq1  ACATGGAATCTGTGAGTAATAATAGAAAGTGTGGTTGAGCCTGTGAACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAATCTGTGAGTAATAATAGAAAGTGTGGTTGAGCCTGTGAACTC  450

seq1  CTTGTCTCAAAATTAGATTCTGAACATTTGCAGCCATTGCTAGAGCCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTCAAAATTAGATTCTGAACATTTGCAGCCATTGCTAGAGCCTTG  500

seq1  GCTTGTACTTTACAGAATTATTGGACTGAATTATTTCATTTGGTCCCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTACTTTACAGAATTATTGGACTGAATTATTTCATTTGGTCCCAGT  550

seq1  GTGCCTTGTCAACTGAAAATATTGTCCCAGAGAGTTAACAAAACAATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTGTCAACTGAAAATATTGTCCCAGAGAGTTAACAAAACAATATT  600

seq1  TTGTAAAGAAATCATTCCTGCAGGGATAGGGAAACCTGTTGGTAACCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAGAAATCATTCCTGCAGGGATAGGGAAACCTGTTGGTAACCTGA  650

seq1  GTCTCTGACCAGTGATATCAAACAGACACAGGCTGGGAAAGATCCAGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGACCAGTGATATCAAACAGACACAGGCTGGGAAAGATCCAGGGT  700

seq1  TCACTAAGCTGATTAAATCACAAGGAAATGGCAAAGCTTACCCCAGCGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAAGCTGATTAAATCACAAGGAAATGGCAAAGCTTACCCCAGCGCC  750

seq1  CTGAAGCCCAGTCTCCTTTGGACCTAGAGGAGGTTTGAAACTGTGTGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCCCAGTCTCCTTTGGACCTAGAGGAGGTTTGAAACTGTGTGTTT  800

seq1  ATAATTTTTTCCTGCATAGATGACAGAATGGACAGTTTAATGACTTCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTTTCCTGCATAGATGACAGAATGGACAGTTTAATGACTTCTCA  850

seq1  TTGTGGTTGGCCTTAGCTTTAAATGAGAAGTTCTTCATTTTCCATG-TCT  899
      |||||||||| ||||||||||||||||||||||||||||||||||| |||
seq2  TTGTGGTTGGGCTTAGCTTTAAATGAGAAGTTCTTCATTTTCCATGTTCT  900

seq1  AGTACTTACACATCCCTT-GATTATCCTTAAATACTGTGGCTGGTTATAG  948
      |||||||||||||||||| |||||||||||||||||| |||||| |||||
seq2  AGTACTTACACATCCCTTGGATTATCCTTAAATACTGGGGCTGGGTATAG  950

seq1  ATTCTAGCTCAGTTTCCAAATCAAGTATGTTTTACCCACAAATGCATGAA  998
      |||||||||||| ||||||||| ||||||||||| |||| |||||||| |
seq2  ATTCTAGCTCAG-TTCCAAATC-AGTATGTTTTA-CCAC-AATGCATG-A  995

seq1  CAC-ATAGCAATAGTTTTGCTTCTCTCTTTGTCTTGAAGGAAGGTAAGAG  1047
      ||| |||||||||| |||||||  |||||||||||||    |||||||||
seq2  CACAATAGCAATAG-TTTGCTTTCCTCTTTGTCTTGA---GAGGTAAGAG  1041

seq1  ACATGTAGCTCTTTTCTTTTCTCCTGGAATTCATTCACTTTCCCTAGTGA  1097
      ||||||||||| ||| ||||| ||| | ||||||||||||||||||||||
seq2  ACATGTAGCTCCTTTTTTTTC-CCT-GTATTCATTCACTTTCCCTAGTGA  1089

seq1  CAATAACACTTGT-GATGGGTATCTACAAACCATTCCCAGT-CTCACTCT  1145
      ||  ||||||||| ||||||||||  ||||||||| ||||| ||||||||
seq2  CATAAACACTTGTGGATGGGTATCACCAAACCATT-CCAGTCCTCACTCT  1138

seq1  CTTCTTCAGATAAAA  1160
      |||||||||||||||
seq2  CTTCTTCAGATAAAA  1153