BAC Information

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BAC

Clone NameB6Ng01-043N03
Chromosome2 (Build37)
Map Location 171,131,593 - 171,254,846
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043739, Bcas1, LOC228916, Cyp24a1, Pfdn4, 4930470P17Rik, Dok5, LOC668955, LOC100043743
Downstream geneLOC100043744, Cbln4, Mc3r, 2010011I20Rik, Aurka, Cstf1, F730031O20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043N03.bB6Ng01-043N03.g
ACCDH869763DH869764
length94902
definitionDH869763|Mus musculus domesticus DNA, BAC clone: B6Ng01-043N03, 5' end.DH869764|Mus musculus domesticus DNA, BAC clone: B6Ng01-043N03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(171,254,753 - 171,254,846)(171,131,593 - 171,132,494)
sequence
tcagagaataagtaaaataaaaaactggcaaatgcaaatgtatctgaaag
aaagagggaggaaggaaggaaggaaagaaggaaggagggaggga
gaattctctgatttttccattcactccccggggaaccaacaggctaccac
cagcaacacacttaggaatttgaggttctgtagccatacttagtatccaa
cagaaactgcgctgtctgctaaacagtatctcgactgcagagcttctctg
actgttggtggatcgagggaccaggcaccgccattatcaccatggcaaca
gtatgcaggccctatctgaggaaatctgcacatgggaccactggctctcg
agcaggcgtgcctcagcttcctctggagtctgctttctctgcaagtctgg
tgtgttctagggtttgccatatgtgttagccatcgaattatttcttagtt
ttaatctgcccttctctggtgtgctggctagctttatgtcaacttgacat
aaaattagagtcattttggaagggggaacctcaattttaaaaaatgtcct
tactagattgtcctgtgggaaaacttgtggtgtattttctcagttgatgt
gtgaagggcttggcccactctgtgcggtgtcaccccaggacatgcattcc
taaatggtataagcaagcaggctgggcaagccatgagaagcaagccagta
agcagcaccccttcgtggcttctgcatcagctcctgcctccaggttcctg
ccctgtgtgagttcttgtcctgaatttccccagccatggagtatgatctg
agatgtgtacgttgaaataaacctgtttctcctctagatgttcatggtca
tgttgtatgagcacaccaatagcatccctaactaagaggagaacccattc
tgtgcaaatgctgtgggagtcgtcctcagctgctacagtgtcaagcttcc
ttgtcaaatgcaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_171254753_171254846
seq2: B6Ng01-043N03.b_50_143 (reverse)

seq1  TCCCTCCCTCCTTCCTTCTTTCCTTCCTTCCTTCCTCCCTCTTTCTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTCCTTCCTTCTTTCCTTCCTTCCTTCCTCCCTCTTTCTTTCA  50

seq1  GATACATTTGCATTTGCCAGTTTTTTATTTTACTTATTCTCTGA  94
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACATTTGCATTTGCCAGTTTTTTATTTTACTTATTCTCTGA  94

seq1: chr2_171131593_171132494
seq2: B6Ng01-043N03.g_68_969

seq1  GAATTCTCTGATTTTTCCATTCACTCCCCGGGGAACCAACAGGCTACCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGATTTTTCCATTCACTCCCCGGGGAACCAACAGGCTACCAC  50

seq1  CAGCAACACACTTAGGAATTTGAGGTTCTGTAGCCATACTTAGTATCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACACACTTAGGAATTTGAGGTTCTGTAGCCATACTTAGTATCCAA  100

seq1  CAGAAACTGCGCTGTCTGCTAAACAGTATCTCGACTGCAGAGCTTCTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACTGCGCTGTCTGCTAAACAGTATCTCGACTGCAGAGCTTCTCTG  150

seq1  ACTGTTGGTGGATCGAGGGACCAGGCACCGCCATTATCACCATGGCAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGGTGGATCGAGGGACCAGGCACCGCCATTATCACCATGGCAACA  200

seq1  GTATGCAGGCCCTATCTGAGGAAATCTGCACATGGGACCACTGGCTCTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCAGGCCCTATCTGAGGAAATCTGCACATGGGACCACTGGCTCTCG  250

seq1  AGCAGGCGTGCCTCAGCTTCCTCTGGAGTCTGCTTTCTCTGCAAGTCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGCGTGCCTCAGCTTCCTCTGGAGTCTGCTTTCTCTGCAAGTCTGG  300

seq1  TGTGTTCTAGGGTTTGCCATATGTGTTAGCCATCGAATTATTTCTTAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCTAGGGTTTGCCATATGTGTTAGCCATCGAATTATTTCTTAGTT  350

seq1  TTAATCTGCCCTTCTCTGGTGTGCTGGCTAGCTTTATGTCAACTTGACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTGCCCTTCTCTGGTGTGCTGGCTAGCTTTATGTCAACTTGACAT  400

seq1  AAAATTAGAGTCATTTTGGAAGGGGGAACCTCAATTTTAAAAAATGTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAGAGTCATTTTGGAAGGGGGAACCTCAATTTTAAAAAATGTCCT  450

seq1  TACTAGATTGTCCTGTGGGAAAACTTGTGGTGTATTTTCTCAGTTGATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGATTGTCCTGTGGGAAAACTTGTGGTGTATTTTCTCAGTTGATGT  500

seq1  GTGAAGGGCTTGGCCCACTCTGTGCGGTGTCACCCCAGGACATGCATTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGGCTTGGCCCACTCTGTGCGGTGTCACCCCAGGACATGCATTCC  550

seq1  TAAATGGTATAAGCAAGCAGGCTGGGCAAGCCATGAGAAGCAAGCCAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGTATAAGCAAGCAGGCTGGGCAAGCCATGAGAAGCAAGCCAGTA  600

seq1  AGCAGCACCCCTTCGTGGCTTCTGCATCAGCTCCTGCCTCCAGGTTCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCACCCCTTCGTGGCTTCTGCATCAGCTCCTGCCTCCAGGTTCCTG  650

seq1  CCCTGTGTGAGTTCTTGTCCTGAATTTCCCCAGCCATGGAGTATGATCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGTGAGTTCTTGTCCTGAATTTCCCCAGCCATGGAGTATGATCTG  700

seq1  AGATGTGTACGTTGAAATAAACCTGTTTCTCCTCTAGATGTTCATGGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGTACGTTGAAATAAACCTGTTTCTCCTCTAGATGTTCATGGTCA  750

seq1  TGTTGTATGAGCACACCAATAGCATCCCTAACTAAGAGGAGAACCCATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTATGAGCACACCAATAGCATCCCTAACTAAGAGGAGAACCCATTC  800

seq1  TGTGCAAATGCTGTGGGAGTCGTCCTCAGCTGCTACAGTGTCAAGCTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAAATGCTGTGGGAGTCGTCCTCAGCTGCTACAGTGTCAAGCTTCC  850

seq1  TTGTCAAATGCAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAAATGCAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  900

seq1  AG  902
       |
seq2  TG  902