BAC Information

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BAC

Clone NameB6Ng01-045E23
Chromosome2 (Build37)
Map Location 40,665,009 - 40,666,056
singlet/doubletsinglet
Overlap geneLrp1b
Upstream geneLOC100042604, Magmas-ps, LOC666531
Downstream geneLOC100042629
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045E23.bB6Ng01-045E23.g
ACCDH870800DH870801
length1,044898
definitionDH870800|Mus musculus domesticus DNA, BAC clone: B6Ng01-045E23, 5' end.DH870801|Mus musculus domesticus DNA, BAC clone: B6Ng01-045E23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaaactttgtaaagaaatgattgcaatgtctttgttttgtct
atagtttttatttgtttggttggtatttgataaacagtggtcagtaatat
agaaattgctgtgatattcaccaaatatgaaaggcacatggaaaagatat
agaaatccttttatatacaatagatagaaacttgtatcttctctgtcact
attaaaaccttaaaaattcttcaggagtcagacttttcaatgctaaattt
tatttactgtaagatttaatctgcccttagcagctactgtaaaatggatc
ctgagtgtgattgctgtggttacagcttctgggttagcaatcattgctca
cttaggtggtgatgagcagtcagaaatcttcctggaaatcctattatagt
tcactacataggtcacttccatctttcgctgtcaagttgaagatgcttaa
agtcaatcccactaattccttctatgtctcagtgcatggttgccttgagt
tctatttgacaattgagccatgagttggccttgattggccttgacaatag
agtttcaagatcctaaggcttgcactcaagagagggaatattgtctaagt
gaaagacagttatttacttctatagaattttctaacatcaattataaagc
tgttttgcattgtcagttatttaaatgaactctgtttcatcttctttgca
ctatcaacttaatagctgaatgttgtttcacatatttttctttgcatgtg
gaaagcaataagccatcacttcgatgagaaataaaatgaaagctattgct
tttgtaatattttgtatatttgattgggaaatatatttgtctttgattta
ttttcatatgtagacaatgcgtgaggtagaaagacttgtggtactaggta
tgaactcctggatcaaattattatcacaagaatttgggattaggaaaaat
gcctaaagaaagaattgtttgggcgatgtgactcccgttttgttaaaaaa
cattttctttccataaaaaaaaaaggttttccctaacaatactc

gaattcccaggaatctctgagggtgaccctagctaagagtcctaccaatg
agagagatagtgcctgaacaggctatctcctgtagcaaggcaaaacttcc
agtggagggattgggacaccaaccacacataaaacctttgacctacaaat
tgtcctgaattcaagatgtatagggtgcattttgtcctgaatacaagata
gagcacacaaactgagtaaatggcaaaccaatgcctggtccagcttaaga
cccatgccatgagtgggagcccactcctgacacaattaatggcattttcc
tgtacctgcagacatgtgcctagcacaaccctaatgaggcaggcttcatc
cagcaactgatggaaagagatgcagagaagcacagtaaaatatcaggtgg
aatttagggcatccagcagaagagtgggaggagagaatgtagtaatttga
ggaggtcaacatcaacacaagatacccacagaaattactttcctggtccc
attggggatcacagacacagaatcagcaacaagcaagcctatgtgggact
gatgtaggtcatctgcacttatgtaactgttgtgtagcttggtcttcatg
taagactactgacggtaagagcaggggctgactctgactctgttgcctgc
ttatagaactctttcccctaattgggatccctcatctagcctcaatagga
gaagataaccctatttttactgcaacttgatatggtaaggctggtttata
acaatggggaggcctcctttgtctgatgagaaagggaagaggagtgaatg
ggagagagaaaggtcaggggagaggactagaagtaagaaggatacctcag
atggtcagatataaagcaacaattagcaatactttaaattagttctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_40665009_40666056
seq2: B6Ng01-045E23.b_43_1086 (reverse)

seq1  GAGTATTGTTTATGGGAAACCATTTTTTTTTATTGTGAAGAAAATAGTTT  50
      |||||||| ||| || ||||| |||||||||| ||  |||||||| ||||
seq2  GAGTATTG-TTAGGGAAAACCTTTTTTTTTTA-TGGAAAGAAAAT-GTTT  47

seq1  TCTTACAAAACAGGAGTCACCATCGCCCATACAATTCCTTCTTTTGGCAT  100
      | | ||||||| ||||||| ||||||||| ||||||| |||||| |||||
seq2  TTTAACAAAACGGGAGTCA-CATCGCCCAAACAATTCTTTCTTTAGGCAT  96

seq1  TTTTCCTAATTCCAAA-TCTTTTGATAATAATTTGAT-CATGAGTTCATA  148
      |||||||||| ||||| |||| ||||||||||||||| || |||||||||
seq2  TTTTCCTAATCCCAAATTCTTGTGATAATAATTTGATCCAGGAGTTCATA  146

seq1  CCTAGTATCCACAAGTCTTTCTA-CTCACGCATTGTCTAACATATTGAAA  197
      ||||||| ||||||||||||||| |||||||||||||| ||||| |||||
seq2  CCTAGTA-CCACAAGTCTTTCTACCTCACGCATTGTCT-ACATA-TGAAA  193

seq1  ATAAATCAAAGACAAATATATTTCCCAATCAAATATACAAAATATTACAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCAAAGACAAATATATTTCCCAATCAAATATACAAAATATTACAA  243

seq1  AAGCAATAGCTTTCATTTTATTTCTCATCGAAGTGATGGCTTATTGCTTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATAGCTTTCATTTTATTTCTCATCGAAGTGATGGCTTATTGCTTT  293

seq1  CCACATGCAAAGAAAAATATGTGAAACAACATTCAGCTATTAAGTTGATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGCAAAGAAAAATATGTGAAACAACATTCAGCTATTAAGTTGATA  343

seq1  GTGCAAAGAAGATGAAACAGAGTTCATTTAAATAACTGACAATGCAAAAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAAGAAGATGAAACAGAGTTCATTTAAATAACTGACAATGCAAAAC  393

seq1  AGCTTTATAATTGATGTTAGAAAATTCTATAGAAGTAAATAACTGTCTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTATAATTGATGTTAGAAAATTCTATAGAAGTAAATAACTGTCTTT  443

seq1  CACTTAGACAATATTCCCTCTCTTGAGTGCAAGCCTTAGGATCTTGAAAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAGACAATATTCCCTCTCTTGAGTGCAAGCCTTAGGATCTTGAAAC  493

seq1  TCTATTGTCAAGGCCAATCAAGGCCAACTCATGGCTCAATTGTCAAATAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGTCAAGGCCAATCAAGGCCAACTCATGGCTCAATTGTCAAATAG  543

seq1  AACTCAAGGCAACCATGCACTGAGACATAGAAGGAATTAGTGGGATTGAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAGGCAACCATGCACTGAGACATAGAAGGAATTAGTGGGATTGAC  593

seq1  TTTAAGCATCTTCAACTTGACAGCGAAAGATGGAAGTGACCTATGTAGTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGCATCTTCAACTTGACAGCGAAAGATGGAAGTGACCTATGTAGTG  643

seq1  AACTATAATAGGATTTCCAGGAAGATTTCTGACTGCTCATCACCACCTAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAATAGGATTTCCAGGAAGATTTCTGACTGCTCATCACCACCTAA  693

seq1  GTGAGCAATGATTGCTAACCCAGAAGCTGTAACCACAGCAATCACACTCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCAATGATTGCTAACCCAGAAGCTGTAACCACAGCAATCACACTCA  743

seq1  GGATCCATTTTACAGTAGCTGCTAAGGGCAGATTAAATCTTACAGTAAAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCATTTTACAGTAGCTGCTAAGGGCAGATTAAATCTTACAGTAAAT  793

seq1  AAAATTTAGCATTGAAAAGTCTGACTCCTGAAGAATTTTTAAGGTTTTAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTAGCATTGAAAAGTCTGACTCCTGAAGAATTTTTAAGGTTTTAA  843

seq1  TAGTGACAGAGAAGATACAAGTTTCTATCTATTGTATATAAAAGGATTTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGACAGAGAAGATACAAGTTTCTATCTATTGTATATAAAAGGATTTC  893

seq1  TATATCTTTTCCATGTGCCTTTCATATTTGGTGAATATCACAGCAATTTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTTTTCCATGTGCCTTTCATATTTGGTGAATATCACAGCAATTTC  943

seq1  TATATTACTGACCACTGTTTATCAAATACCAACCAAACAAATAAAAACTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTACTGACCACTGTTTATCAAATACCAACCAAACAAATAAAAACTA  993

seq1  TAGACAAAACAAAGACATTGCAATCATTTCTTTACAAAGTTTAAAGAATT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAAAACAAAGACATTGCAATCATTTCTTTACAAAGTTTAAAGAATT  1043

seq1  C  1048
      |
seq2  C  1044


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