BAC Information

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BAC

Clone NameB6Ng01-045F19
Chromosome2 (Build37)
Map Location 161,968,278 - 162,094,486
singlet/doubletdoublet
Overlap genePtprt
Upstream geneLOC100043694, LOC383769, LOC629655, LOC383770
Downstream geneLOC100043895, LOC100043896, LOC100043696, LOC497655, LOC668947, Sfrs6, L3mbtl, LOC241765, Sgk2, Ift52, Mybl2, 2410116G06Rik, LOC269389
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045F19.bB6Ng01-045F19.g
ACCDH870838DH870839
length914449
definitionDH870838|Mus musculus domesticus DNA, BAC clone: B6Ng01-045F19, 5' end.DH870839|Mus musculus domesticus DNA, BAC clone: B6Ng01-045F19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(161,968,278 - 161,969,149)(162,094,032 - 162,094,486)
sequence
gaattccacatatgtaaacacacagagagatgaatatatttataaatcac
gaaaaacaaacaaaaatattgctattcctgggtcaataaaggagaaagaa
tgtttacagagggacacgttgctaaatttatttggaaggaatcccaagag
gtttataggagataaggcacaggacttaagaatacatactgctctttcag
agaacctgaattcaatgcccagcgctcgtgttggggagcttacaatcact
tttaacttcagctccagggatctggcaactctgggttctaaaggcatctg
aactcatgtgcacataaacacacataggtgcgtgcacgcatacataatta
aaaataagaaatttctattaaaaagaggtgagcttggttttgtcgtggaa
tactttggtttctccatctatggtaattgagagtttggctgggtatagta
gcctgggctggaatttgtgttctcttagtgtctgtataacatctgtccag
gctcttctggctttcatagtctctggtgaaaaatctggtgtaattctgat
aggcttgcctttgtatgttacttgacctttttcccttaccgcttttagta
ttctatctttatttagtgcatttgttgttctgattattatgtgtcgggag
gaatttcttttctggtccagtctatttggagttctgtaggcttcttgtat
gtttcataggtatctctttctttatatttggggaagttttcttcaataat
tttgttgaagatgtttgctggtcctttgagttgaaaatcttcattctcat
ccactcctattatccgtaggtttggtcttctcattgtgtccatatgtatc
aaaagatggcctagtcggtcatcactggaaagagaggcccattggacaca
caaactttatatgc
caagccaagtgagagacctatctctaaataaataaataaataaataaata
aatccaaaatgggtggcacctgaggaatgacaacagaggttaacctctgg
tcaccaaacacacatatcaatatacacatttacacattcacacaaacaca
catacacatacatacagaggaagaccaagttgattgcagaatagcatcaa
gatcaataaggacgttaggctattaataagtcgtagcttctgtgattcat
ttgaaaccacaatgaaggaccttgttctgattatttgttgctgtgactga
gtgttattgctaaaaatccattaaaccattccaaatgactggctgctctt
tctttctttctttttttaaatgtattttattacattgtatttgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_161968278_161969149
seq2: B6Ng01-045F19.b_43_916

seq1  GAATTCCACATATGTAAACACACAGAGAGATGAATATATTTATAAATCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATATGTAAACACACAGAGAGATGAATATATTTATAAATCAC  50

seq1  GAAAAACAAACAAAAATATTGCTATTCCTGGGTCAATAAAGGAGAAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACAAACAAAAATATTGCTATTCCTGGGTCAATAAAGGAGAAAGAA  100

seq1  TGTTTACAGAGGGACACGTTGCTAAATTTATTTGGAAGGAATCCCAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACAGAGGGACACGTTGCTAAATTTATTTGGAAGGAATCCCAAGAG  150

seq1  GTTTATAGGAGATAAGGCACAGGACTTAAGAATACATACTGCTCTTTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATAGGAGATAAGGCACAGGACTTAAGAATACATACTGCTCTTTCAG  200

seq1  AGAACCTGAATTCAATGCCCAGCGCTCGTGTTGGGGAGCTTACAATCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTGAATTCAATGCCCAGCGCTCGTGTTGGGGAGCTTACAATCACT  250

seq1  TTTAACTTCAGCTCCAGGGATCTGGCAACTCTGGGTTCTAAAGGCATCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTTCAGCTCCAGGGATCTGGCAACTCTGGGTTCTAAAGGCATCTG  300

seq1  AACTCATGTGCACATAAACACACATAGGTGCGTGCACGCATACATAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATGTGCACATAAACACACATAGGTGCGTGCACGCATACATAATTA  350

seq1  AAAATAAGAAATTTCTATTAAAAAGAGGTGAGCTTGGTTTTGTCGTGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAGAAATTTCTATTAAAAAGAGGTGAGCTTGGTTTTGTCGTGGAA  400

seq1  TACTTTGGTTTCTCCATCTATGGTAATTGAGAGTTTGGCTGGGTATAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGGTTTCTCCATCTATGGTAATTGAGAGTTTGGCTGGGTATAGTA  450

seq1  GCCTGGGCTGGAATTTGTGTTCTCTTAGTGTCTGTATAACATCTGTCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGGCTGGAATTTGTGTTCTCTTAGTGTCTGTATAACATCTGTCCAG  500

seq1  GCTCTTCTGGCTTTCATAGTCTCTGGTGAAAAATCTGGTGTAATTCTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCTGGCTTTCATAGTCTCTGGTGAAAAATCTGGTGTAATTCTGAT  550

seq1  AGGCTTGCCTTTGTATGTTACTTGACCTTTTTCCCTTACCGCTTTTAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGCCTTTGTATGTTACTTGACCTTTTTCCCTTACCGCTTTTAGTA  600

seq1  TTCTATCTTTATTTAGTGCATTTGTTGTTCTGATTATTATGTGTCGGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCTTTATTTAGTGCATTTGTTGTTCTGATTATTATGTGTCGGGAG  650

seq1  GAATTTCTTTTCTGGTCCAGTCTATTTGGAGTTCTGTAGGCTTCTTGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCTTTTCTGGTCCAGTCTATTTGGAGTTCTGTAGGCTTCTTGTAT  700

seq1  G-TTCATAGGTATCTCTTTCTTTATATTT-GGGAAGTTTTCTTCAATAAT  748
      | ||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTTTCATAGGTATCTCTTTCTTTATATTTGGGGAAGTTTTCTTCAATAAT  750

seq1  TTTGTTGAAGATGTTTGCTGGTCCTTTGAGTTGAAAATCTTCATTCTCAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGAAGATGTTTGCTGGTCCTTTGAGTTGAAAATCTTCATTCTCAT  800

seq1  CCACTCCTATTATCCGTAGGTTTGGTCTTCTCATTGTGTCCATATGTATC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCTATTATCCGTAGGTTTGGTCTTCTCATTGTGTCCATATGTATC  850

seq1  AAAAGATGGCCTAGTCGGCCATCA  872
      |||||||||||||||||| |||||
seq2  AAAAGATGGCCTAGTCGGTCATCA  874

seq1: chr2_162094032_162094486
seq2: B6Ng01-045F19.g_67_521 (reverse)

seq1  CACACACACACACACACACACACACATACACACACACACACACACACACA  50
      |||||||||||| ||||||||||||| |||||||||||||||||||||||
seq2  CACACACACACATACACACACACACACACACACACACACACACACACACA  50

seq1  CACACACAAATACAATGTAATAAAATACATTTAAAAAAAGAAAGAAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACAAATACAATGTAATAAAATACATTTAAAAAAAGAAAGAAAGAA  100

seq1  AGAGCAGCCAGTCATTTGGAATGGTTTAATGGATTTTTAGCAATAACACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGCCAGTCATTTGGAATGGTTTAATGGATTTTTAGCAATAACACT  150

seq1  CAGTCACAGCAACAAATAATCAGAACAAGGTCCTTCATTGTGGTTTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACAGCAACAAATAATCAGAACAAGGTCCTTCATTGTGGTTTCAAA  200

seq1  TGAATCACAGAAGCTACGACTTATTAATAGCCTAACGTCCTTATTGATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCACAGAAGCTACGACTTATTAATAGCCTAACGTCCTTATTGATCT  250

seq1  TGATGCTATTCTGCAATCAACTTGGTCTTCCTCTGTATGTATGTGTATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTATTCTGCAATCAACTTGGTCTTCCTCTGTATGTATGTGTATGT  300

seq1  GTGTTTGTGTGAATGTGTAAATGTGTATATTGATATGTGTGTTTGGTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGTGTGAATGTGTAAATGTGTATATTGATATGTGTGTTTGGTGAC  350

seq1  CAGAGGTTAACCTCTGTTGTCATTCCTCAGGTGCCACCCATTTTGGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTTAACCTCTGTTGTCATTCCTCAGGTGCCACCCATTTTGGATTT  400

seq1  ATTTATTTATTTATTTATTTATTTAGAGATAGGTCTCTCACTTGGCTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTTATTTATTTATTTAGAGATAGGTCTCTCACTTGGCTTGG  450

seq1  AATTC  455
      |||||
seq2  AATTC  455