BAC Information

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BAC

Clone NameB6Ng01-047B15
Chromosome2 (Build37)7 (Build37)
Map Location 142,776,691 - 142,777,220102,349,128 - 102,349,470
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047B15.bB6Ng01-047B15.g
ACCDH872056DH872057
length940342
definitionDH872056|Mus musculus domesticus DNA, BAC clone: B6Ng01-047B15, 5' end.DH872057|Mus musculus domesticus DNA, BAC clone: B6Ng01-047B15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,691 - 142,777,220)(102,349,128 - 102,349,470)
sequence
gaattctttgtcctgttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ttatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttcttctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgttgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctactggtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttcttcagagatttgaagtttttatcatat
agatctttcacttccttagttagagtcacgtcagatattt
atttgctatgatttaaaaaaaaaaaaaagtattttctgtccttttcaaag
aatcaaagcactaatgtcataaaatgctgatttgtgggataatcaaaaga
tagccaggataaagaattaaattgatttgtaaataaaaatactggtcttt
ggtttgcaagagataagcagtctaaggagcaattgcagttctttttgaaa
tttgtctggagagttttctggcaaaagtcagaaaaattctaagggagcag
tatagctctctctctctctctctctctctctctctctatatatatatata
tatatatatatatatatatatatatatatatatatatatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776691_142777220
seq2: B6Ng01-047B15.b_67_596 (reverse)

seq1  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCAC  50

seq1  TTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGACAGCAT  100
      ||||||||| ||||||||||||||||||||||| ||||||||||||||||
seq2  TTGATCTTCAACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCAT  100

seq1  TTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGC  150

seq1  GAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATC  200
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAATGGATC  200

seq1  AAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGT  250
      || ||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAAGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGAAGAAAGT  250

seq1  GGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCTGAACAGAA  300
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAACAGAA  300

seq1  CAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATG  350

seq1  AAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAG  400

seq1  ACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAAGG  450

seq1  GACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAA  500

seq1  TCAAATAACCCCATTAAAAAATGGGGCTCA  530
      ||||||||||||||||||||||||||||||
seq2  TCAAATAACCCCATTAAAAAATGGGGCTCA  530

seq1: chr7_102349128_102349470
seq2: B6Ng01-047B15.g_67_411

seq1  GAATTCATTTGCTATGATTTAAAAAAAAAAAAAAGTATTTTCTGTCCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGCTATGATTTAAAAAAAAAAAAAAGTATTTTCTGTCCTTT  50

seq1  TCAAAGAATCAAAGCACTAATGTCATAAAATGCTGATTTGTGGGATAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAATCAAAGCACTAATGTCATAAAATGCTGATTTGTGGGATAATC  100

seq1  AAAAGATAGCCAGGATAAAGAATTAAATTGATTTGTAAATAAAAATACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATAGCCAGGATAAAGAATTAAATTGATTTGTAAATAAAAATACTG  150

seq1  GTCTTTGGTTTGCAAGAGATAAGCAGTCTAAGGAGCAATTGCAGTTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGGTTTGCAAGAGATAAGCAGTCTAAGGAGCAATTGCAGTTCTTT  200

seq1  TTGAAATTTGTCTGGAGAGTTTTCTGGCAAAAGTCAGAAAAATTCTAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATTTGTCTGGAGAGTTTTCTGGCAAAAGTCAGAAAAATTCTAAGG  250

seq1  GAGCAGTATAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATA  300
      ||||||||||||||||||||||||||||||||||||||| | ||||||||
seq2  GAGCAGTATAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATA  300

seq1  TATATATATATATATATATATATATATATATATATATATATAT--  343
      |||||||||||||||||||||||||||||||||||||||||||  
seq2  TATATATATATATATATATATATATATATATATATATATATATAT  345