BAC Information

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BAC

Clone NameB6Ng01-049A14
Chromosome2 (Build37)
Map Location 34,731,840 - 34,902,477
singlet/doubletdoublet
Overlap geneD730039F16Rik, Phf19, Traf1, Hc
Upstream gene2610528K11Rik, LOC100041931, Pbx3, LOC665948, Mapkap1, LOC623448, LOC623269, Gapvd1, Hspa5, Rabepk, Fbxw2, EG623370, Psmd5
Downstream geneAI182371, Rab14, Gsn, Stom, LOC654354, 4930568D16Rik, 4930402F06Rik, Ggta1, LOC666042, LOC100042194, Dab2ip, Ttll11, Ndufa8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049A14.bB6Ng01-049A14.g
ACCDH873412DH873413
length859370
definitionDH873412|Mus musculus domesticus DNA, BAC clone: B6Ng01-049A14, 5' end.DH873413|Mus musculus domesticus DNA, BAC clone: B6Ng01-049A14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,901,620 - 34,902,477)(34,731,840 - 34,732,215)
sequence
gaattcatttctcacagcccatcttccccatctgaaaaaaaaaaagatac
taatacaatttgtttcatggagttgtaccaattattgatgtaggtgggtc
ctgcccataatgggggaggtgggtgatgcccctgggcaaatggccctgaa
tttataaaagcaggctaagcaagccagaaagagcaagccagtaggcagtg
ttcctccacagcccccggttcagtccctgcctctagactcctgcctcgag
ttccttgcctaactcccttcaatgatggaatatcacctgagagttgtgat
ctgaaacaaatcctttcctctccaagttgcttcggtcatagtgttttagc
cctgttggattttgtaagtagagaaataacatactgtctgaatcaaactg
ccaatttcccactaactctgataaaaaacacctcatactcccatccatcc
atatggtagctacttggtaaacagttacagacacaagttattttacacta
acgatgcattcccaaaggcttcctggggttgcaatgtatttaacacattg
aactgtatgttaaattcaatacaagtagtctccttatatgaatcctaggg
gtctctttttttcaacatacattttcatttatggattgtgaatacagtct
ttcaaatgagagttagctcattaagaactgtgaaattaaaacaaaaatct
actgggcttggtggcatgagcctatagtcccaactatgtgagaggctgag
gcaagaggatcatgagttcaggttgagttcgagaccaggctaactaattg
aatgaaacccttgactgaaaagttaaagtgaaaagataggtgggtggtta
ggggagttg
tgagagcagaagcagtctacacacacacacacacacacacacacacacac
acatgcacacgcacatgcacacacacgcgcgcacgcatacatgcacaaca
ctagattgagcaggttgtctatatatgtatatatatacacacacacgtaa
cattgagtagatgcaacaggttgtatttatatatgtgtttatatatatgc
aatagtaacaaagaaagggagggaaagtgggagaggtggagggggaagga
gaagagagaatgactttatattttaattttagaagaatattttttaaaaa
ggtgaaaagcatctgagaaagacacccaacattgacctctgaacgggtct
tcccaagtacttgtatgcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_34901620_34902477
seq2: B6Ng01-049A14.b_47_905 (reverse)

seq1  CCACTCCCCTAACCACCCACCTATCTTTTCACTTTAACTTTTCAGTC-AG  49
      | ||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CAACTCCCCTAACCACCCACCTATCTTTTCACTTTAACTTTTCAGTCAAG  50

seq1  GGTTTCATTCAATTAGTTAGCCTGGTCTCGAACTCACCCTGAACTCATGA  99
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGTTTCATTCAATTAGTTAGCCTGGTCTCGAACTCAACCTGAACTCATGA  100

seq1  TCCTCTTGCCTCAGCCTCTCACATAGTTGGGACTATAGGCTCATGCCACC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTGCCTCAGCCTCTCACATAGTTGGGACTATAGGCTCATGCCACC  150

seq1  AAGCCCAGTAGATTTTTGTTTTAATTTCACAGTTCTTAATGAGCTAACTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCAGTAGATTTTTGTTTTAATTTCACAGTTCTTAATGAGCTAACTC  200

seq1  TCATTTGAAAGACTGTATTCACAATCCATAAATGAAAATGTATGTTGAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGAAAGACTGTATTCACAATCCATAAATGAAAATGTATGTTGAAA  250

seq1  AAAAGAGACCCCTAGGATTCATATAAGGAGACTACTTGTATTGAATTTAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGACCCCTAGGATTCATATAAGGAGACTACTTGTATTGAATTTAA  300

seq1  CATACAGTTCAATGTGTTAAATACATTGCAACCCCAGGAAGCCTTTGGGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGTTCAATGTGTTAAATACATTGCAACCCCAGGAAGCCTTTGGGA  350

seq1  ATGCATCGTTAGTGTAAAATAACTTGTGTCTGTAACTGTTTACCAAGTAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATCGTTAGTGTAAAATAACTTGTGTCTGTAACTGTTTACCAAGTAG  400

seq1  CTACCATATGGATGGATGGGAGTATGAGGTGTTTTTTATCAGAGTTAGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCATATGGATGGATGGGAGTATGAGGTGTTTTTTATCAGAGTTAGTG  450

seq1  GGAAATTGGCAGTTTGATTCAGACAGTATGTTATTTCTCTACTTACAAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTGGCAGTTTGATTCAGACAGTATGTTATTTCTCTACTTACAAAA  500

seq1  TCCAACAGGGCTAAAACACTATGACCGAAGCAACTTGGAGAGGAAAGGAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACAGGGCTAAAACACTATGACCGAAGCAACTTGGAGAGGAAAGGAT  550

seq1  TTGTTTCAGATCACAACTCTCAGGTGATATTCCATCATTGAAGGGAGTTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCAGATCACAACTCTCAGGTGATATTCCATCATTGAAGGGAGTTA  600

seq1  GGCAAGGAACTCGAGGCAGGAGTCTAGAGGCAGGGACTGAACCGGGGGCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGAACTCGAGGCAGGAGTCTAGAGGCAGGGACTGAACCGGGGGCT  650

seq1  GTGGAGGAACACTGCCTACTGGCTTGCTCTTTCTGGCTTGCTTAGCCTGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGGAACACTGCCTACTGGCTTGCTCTTTCTGGCTTGCTTAGCCTGC  700

seq1  TTTTATAAATTCAGGGCCATTTGCCCAGGGGCATCACCCACCTCCCCCAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAAATTCAGGGCCATTTGCCCAGGGGCATCACCCACCTCCCCCAT  750

seq1  TATGGGCAGGACCCACCTACATCAATAATTGGTACAACTCCATGAAACAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGCAGGACCCACCTACATCAATAATTGGTACAACTCCATGAAACAA  800

seq1  ATTGTATTAGTATCTTTTTTTTTTTCAGATGGGGAAGATGGGCTGTGAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATTAGTATCTTTTTTTTTTTCAGATGGGGAAGATGGGCTGTGAGA  850

seq1  AATGAATTC  858
      |||||||||
seq2  AATGAATTC  859

seq1: chr2_34731840_34732215
seq2: B6Ng01-049A14.g_68_443

seq1  GAATTCTGAGAGCAGAAGCAGTCTACACACACACACACACACACACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGAGCAGAAGCAGTCTACACACACACACACACACACACACAC  50

seq1  ACACACACATGCACACGCACATGCACACACACGCGCGCACGCATACATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACATGCACACGCACATGCACACACACGCGCGCACGCATACATGC  100

seq1  ACAACACTAGATTGAGCAGGTTGTCTATATATGTATATATATACACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACTAGATTGAGCAGGTTGTCTATATATGTATATATATACACACAC  150

seq1  ACGTAACATTGAGTAGATGCAACAGGTTGTATTTATATATGTGTTTATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAACATTGAGTAGATGCAACAGGTTGTATTTATATATGTGTTTATAT  200

seq1  ATATGCAATAGTAACAAAGAAAGGGAGGGAAAGTGGGAGAGGTGGAGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAATAGTAACAAAGAAAGGGAGGGAAAGTGGGAGAGGTGGAGGGG  250

seq1  GAAGGAGAAGAGAGAATGACATTATATTTTAATTTCAGAAGAATATTTTT  300
      |||||||||||||||||||| |||||||||||||| ||||||||||||||
seq2  GAAGGAGAAGAGAGAATGACTTTATATTTTAATTTTAGAAGAATATTTTT  300

seq1  TAAAAAGGTGAAAAGCATCTGAGAAAGACACCCAACATTGACCTCTGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGGTGAAAAGCATCTGAGAAAGACACCCAACATTGACCTCTGAAC  350

seq1  GGGTCTTCCCAAGCACATGTATGCAA  376
      ||||||||||||| || |||||||||
seq2  GGGTCTTCCCAAGTACTTGTATGCAA  376