BAC Information

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BAC

Clone NameB6Ng01-050D03
Chromosome2 (Build37)
Map Location 118,433,853 - 118,600,948
singlet/doubletdoublet
Overlap geneBub1b, Pak6, Gm1337, Plcb2, LOC100043272, A430105I19Rik
Upstream geneThbs1, Fsip1, Gpr176, 1700054M17Rik, Eif2ak4, Srp14, LOC668859, Bmf, LOC640461
Downstream geneDisp2, D2Ertd750e, Ivd, Bahd1, Chst14, LOC677379, Ccdc32, Rpusd2, Casc5, Rad51, 1200015F23Rik, Gchfr, Dnajc17, OTTMUSG00000015762, LOC545640, Zfyve19, Ppp1r14d, Spint1, Rhov, Vps18, LOC100043609, Dll4, Chac1, Inoc1, LOC100043612, Exdl1, 1500003O03Rik, LOC100043307, Oip5, Nusap1, Ndufaf1, LOC625328, LOC100043622, Rtf1, Itpka, Ltk, Rpap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050D03.bB6Ng01-050D03.g
ACCDH874218DH874219
length1,087920
definitionDH874218|Mus musculus domesticus DNA, BAC clone: B6Ng01-050D03, 5' end.DH874219|Mus musculus domesticus DNA, BAC clone: B6Ng01-050D03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,599,854 - 118,600,948)(118,433,853 - 118,434,785)
sequence
gaattcacatcacggggacgatacccactgaggacataaccgctccttct
gcagaagccatctgtgtggtactgggtgtcccaaaaggtgggctttggtg
ggagttctagctcttttatgtcttttgagaggaggcaacagcatgggcgc
caagagccccagacctaacagcgctctcatggcctcgtctcacaatgcct
aacttccccagggcttcataggtactgtggggaaagggacctgcctgttg
ttctcctggggttgaagagctattgagatgaaggatgtatagacttattt
cttaaatataaagtgttctttgggatacaaaggtttgtttgcttttgaaa
ctgcacgcaggtacctacacacacacacacacacacacacacacacacac
acacatgcaagcacacttggcagtcaacagatagggctgattgattgcct
ctgccctaccctctctcttttctcttctcttccttcttctacctcctagc
cacccagtcatgctgcttacctggatgcatctttacagggcaagagcagg
aagtgacacacggagcacctgtggttaacagataaagttttatttgcaat
gattttacccccaatctaatctctttcctttctagggctgttcatacata
gttccttcaaaagaagaaaggggtgcctgccaagtttcctggtcatgata
ctccccctccagggtaggtctctgaataaacacctggtattgaggggtca
taggggggcttggatccttcggtgtgtgcagagcagggaggggcagaaca
gatgggtgggcatggactttctagggaggacgaggaccttcagacttgtt
ctgaaggacaaatgaatggatggccttattggccctcactgctcattatt
gtctcttctcataagactggaagaggtgagggtttaaggtctgagtcaac
tttatcatccactggcaagctgtcatcacgtggaagcttattggagctag
agcctcgtctttttgggccttgcatgcaagacaaattgacacccccaaac
tgacaacccataccaagtaacttgaagactaaaggta
gaattcacctgagagatactagttacatgactgtatttatagcaaaggat
tgttctcagagagcacagaagctgtgctccctgctggcttagcaagactt
ttgtccttcattctgtcctgtgtaatatttgtgtgtatgtgcctgtgtac
acacacacacacacgagagagagagagagagagagagagagagagagaga
gagagagagagagagagagagatcttgtgtctcttccagaggaccccaga
gtttggttcccaccagttacatcagacgactcacaaatgcctgtaacttt
ggctcaggggagtcagcacttctggtctctgagggcacctgtactcaggt
gcacatacaacccccccccgaattaataatttcttaagaatcaatgagaa
taatttctttgttcagttatgttgtcctgatgttagtaaaggggagtaat
gatattatctggtgaaaagcgtagtgcagggctagctgactgagctcagt
tatagagcgcctcgctagcatgcctgaaagcctgtgttctgaatggcttt
gctccattcacactcagtgcttccttcaagcctgtcttctctattaagac
agtctccacaaaggtagaaagcattgttacctacaaattatccctgtctc
taaccacggttttatatgactagcctggaacaaatgaaatagtccatttg
ataaatctggactgaaccagacatgccatctaaacatctttaatcttatt
ttatcgtgccttttggtgatagggtcttgccatatagctctggctggctg
gaaatccctattagaccacgctagctcaactttggagatctatgttctaa
ttcaaagtagtgtactacgacttgagtagctatgtccagtttccattata
atttttacaaataccattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_118599854_118600948
seq2: B6Ng01-050D03.b_42_1128 (reverse)

seq1  TACCTTTAGTCTTCAAGTGTACTGTGTTATGGGGTTGTCAGTTCTGGGGT  50
      |||||||||||||||||| |||| || ||| |||||||||||| ||||| 
seq2  TACCTTTAGTCTTCAAGT-TACT-TGGTAT-GGGTTGTCAGTT-TGGGGG  46

seq1  TGTCAATTGTGCCTGGCATGCCAGGCCCAAAAAGACGAGGCTCTAGCCTC  100
      |||||||| || || |||||| |||||||||||||||||||||||||  |
seq2  TGTCAATT-TGTCTTGCATGCAAGGCCCAAAAAGACGAGGCTCTAGCTCC  95

seq1  AAT-AGC-TCCACGTGATGACAGCTTGCCAGTGGATGAT-AAGTTGACTC  147
      ||| ||| ||||||||||||||||||||||||||||||| ||||||||||
seq2  AATAAGCTTCCACGTGATGACAGCTTGCCAGTGGATGATAAAGTTGACTC  145

seq1  AGACCTTAAACCCCTCACCCTCTTCCAGTCTTTATGAGAGGAGACAATAA  197
      |||||||||| |||||| |||||||||||| |||||||| ||||||||||
seq2  AGACCTTAAA-CCCTCA-CCTCTTCCAGTC-TTATGAGAAGAGACAATAA  192

seq1  TGAGCAGTGAGGGCCCAATAAGGCCATCCATTCATTTGTCCTTCAAGAAC  247
      ||||||||||||| |||||||||||||||||||||||||||||| |||||
seq2  TGAGCAGTGAGGG-CCAATAAGGCCATCCATTCATTTGTCCTTC-AGAAC  240

seq1  AAAGTCCTGAAGGTCCTCGTCCTCCCTAG-AAGTCCATGCCCACCCATCT  296
       |||| ||||||||||||||||||||||| ||||||||||||||||||||
seq2  -AAGT-CTGAAGGTCCTCGTCCTCCCTAGAAAGTCCATGCCCACCCATCT  288

seq1  GTTCTGCCCCTCCCTGCTCTGCACACACCGAAGGATCCAAGCCCCCCTAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGCCCCTCCCTGCTCTGCACACACCGAAGGATCCAAGCCCCCCTAT  338

seq1  GACCCCTCAATACCAGGTGTTTATTCAGAGACCTACCCTGGAGGGGGAGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCTCAATACCAGGTGTTTATTCAGAGACCTACCCTGGAGGGGGAGT  388

seq1  ATCATGACCAGGAAACTTGGCAGGCACCCCTTTCTTCTTTTGAAGGAACT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGACCAGGAAACTTGGCAGGCACCCCTTTCTTCTTTTGAAGGAACT  438

seq1  ATGTATGAACAGCCCTAGAAAGGAAAGAGATTAGATTGGGGGTAAAATCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGAACAGCCCTAGAAAGGAAAGAGATTAGATTGGGGGTAAAATCA  488

seq1  TTGCAAATAAAACTTTATCTGTTAACCACAGGTGCTCCGTGTGTCACTTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAATAAAACTTTATCTGTTAACCACAGGTGCTCCGTGTGTCACTTC  538

seq1  CTGCTCTTGCCCTGTAAAGATGCATCCAGGTAAGCAGCATGACTGGGTGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTTGCCCTGTAAAGATGCATCCAGGTAAGCAGCATGACTGGGTGG  588

seq1  CTAGGAGGTAGAAGAAGGAAGAGAAGAGAAAAGAGAGAGGGTAGGGCAGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGGTAGAAGAAGGAAGAGAAGAGAAAAGAGAGAGGGTAGGGCAGA  638

seq1  GGCAATCAATCAGCCCTATCTGTTGACTGCCAAGTGTGCTTGCATGTGTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATCAATCAGCCCTATCTGTTGACTGCCAAGTGTGCTTGCATGTGTG  688

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGTACCTGCGTGCAGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGTACCTGCGTGCAGT  738

seq1  TTCAAAAGCAAACAAACCTTTGTATCCCAAAGAACACTTTATATTTAAGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAGCAAACAAACCTTTGTATCCCAAAGAACACTTTATATTTAAGA  788

seq1  AATAAGTCTATACATCCTTCATCTCAATAGCTCTTCAACCCCAGGAGAAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTCTATACATCCTTCATCTCAATAGCTCTTCAACCCCAGGAGAAC  838

seq1  AACAGGCAGGTCCCTTTCCCCACAGTACCTATGAAGCCCTGGGGAAGTTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCAGGTCCCTTTCCCCACAGTACCTATGAAGCCCTGGGGAAGTTA  888

seq1  GGCATTGTGAGACGAGGCCATGAGAGCGCTGTTAGGTCTGGGGCTCTTGG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTGTGAGACGAGGCCATGAGAGCGCTGTTAGGTCTGGGGCTCTTGG  938

seq1  CGCCCATGCTGTTGCCTCCTCTCAAAAGACATAAAAGAGCTAGAACTCCC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCATGCTGTTGCCTCCTCTCAAAAGACATAAAAGAGCTAGAACTCCC  988

seq1  ACCAAAGCCCACCTTTTGGGACACCCAGTACCACACAGATGGCTTCTGCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGCCCACCTTTTGGGACACCCAGTACCACACAGATGGCTTCTGCA  1038

seq1  GAAGGAGCGGTTATGTCCTCAGTGGGTATCGTCCCCGTGATGTGAATTC  1095
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGCGGTTATGTCCTCAGTGGGTATCGTCCCCGTGATGTGAATTC  1087

seq1: chr2_118433853_118434785
seq2: B6Ng01-050D03.g_69_988

seq1  GAATTCACCTGAGAGATACTAGTTACATGACTGTATTTATAGCAAAGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTGAGAGATACTAGTTACATGACTGTATTTATAGCAAAGGAT  50

seq1  TGTTCTCAGAGAGCACAGAAGCTGTGCTCCCTGCTGGCTTAGCAAGACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCAGAGAGCACAGAAGCTGTGCTCCCTGCTGGCTTAGCAAGACTT  100

seq1  TTGTCCTTCATTCTGTCCTGTGTAATATTTGTGTGTATGTGCCTGTGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTTCATTCTGTCCTGTGTAATATTTGTGTGTATGTGCCTGTGTAC  150

seq1  ACACACACACACACGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  200
      ||||||||||||||  ||||||||||||||||||||||||||||||||||
seq2  ACACACACACACAC--GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  198

seq1  GAGAGAGAGAGAGAGAGAGAGAGATCTTGTGTCTCTTCCAGAGGACCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGATCTTGTGTCTCTTCCAGAGGACCCCA  248

seq1  GAGTTTGGTTCCCACCAGTTACATCAGACGACTCACAAATGCCTGTAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGGTTCCCACCAGTTACATCAGACGACTCACAAATGCCTGTAACT  298

seq1  TTGGCTCAGGGGAGTCAGCACTTCTGGTCTCTGAGGGCACCTGTACTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTCAGGGGAGTCAGCACTTCTGGTCTCTGAGGGCACCTGTACTCAG  348

seq1  GTGCACATACAACCCCCCCCCGAATTAATAATTTCTTAAGAATCAATGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACATACAACCCCCCCCCGAATTAATAATTTCTTAAGAATCAATGAG  398

seq1  AATAATTTCTTTGTTCAGTTATGTTGTCCTGATGTTAGTAAAGGGGAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTCTTTGTTCAGTTATGTTGTCCTGATGTTAGTAAAGGGGAGTA  448

seq1  ATGATATTATCTGGTGAAAAGCGTAGTGCAGGGCTAGCTGACTGAGCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATTATCTGGTGAAAAGCGTAGTGCAGGGCTAGCTGACTGAGCTCA  498

seq1  GTTATAGAGCGCCTCGCTAGCATGCCTGAAAGCCTGTGTTCTGAATGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAGAGCGCCTCGCTAGCATGCCTGAAAGCCTGTGTTCTGAATGGCT  548

seq1  TTGCTCCATTCACACTCAGTGCTTCCTTCAAGCCTGTCTTCTCTATTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCCATTCACACTCAGTGCTTCCTTCAAGCCTGTCTTCTCTATTAAG  598

seq1  ACAGTCTCCACAAAGGTAGAAAGCATTGTTACCTACAAATTATCCCTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCTCCACAAAGGTAGAAAGCATTGTTACCTACAAATTATCCCTGTC  648

seq1  TCTAACCACGGTTTTATATGACTAGCCTGGAACAAATGAAATAGTCCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACCACGGTTTTATATGACTAGCCTGGAACAAATGAAATAGTCCATT  698

seq1  TGATAAATCTGGACTGAACCAGACATGCCATCTAAACATCTTTAATCTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAATCTGGACTGAACCAGACATGCCATCTAAACATCTTTAATCTTA  748

seq1  TTTTATCGTGCCTTTTGGTGATAGGGTCTTGCCATATAGCTCTGGCTGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCGTGCCTTTTGGTGATAGGGTCTTGCCATATAGCTCTGGCTGGC  798

seq1  TTGGAATTCCCTATTAGACCACGCTAGCCTCAAACTTTGGAGGATCTTAT  850
       ||||| |||||||||||||||||||| ||| ||||||||| |||| |||
seq2  -TGGAAATCCCTATTAGACCACGCTAG-CTC-AACTTTGGA-GATC-TAT  843

seq1  TGTTTCTAATTTCAAAGTAGTGTAACTACAGACTTGTGTTGCTATGTCCA  900
         |||||| ||||||||||||| ||||| |||||| || ||||||||||
seq2  --GTTCTAA-TTCAAAGTAGTGT-ACTAC-GACTTGAGTAGCTATGTCCA  888

seq1  GTTTCCATTTATATTTTTAACAAAAACCATTAT  933
      ||||||| ||||| |||| ||||| ||||||||
seq2  GTTTCCA-TTATAATTTTTACAAATACCATTAT  920