BAC Information

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BAC

Clone NameB6Ng01-051C09
Chromosome2 (Build37)
Map Location 142,776,113 - 142,776,646
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051C09.bB6Ng01-051C09.g
ACCDH874878DH874879
length1,1251,241
definitionDH874878|Mus musculus domesticus DNA, BAC clone: B6Ng01-051C09, 5' end.DH874879|Mus musculus domesticus DNA, BAC clone: B6Ng01-051C09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctttgagccccatttttaatggggttatttgagtt
tcaggagtccagcttcttgagctctttatataaaattggatattagtcca
gtatcagatttagtattgggaaaaatcctttcccaatctgttggtggcct
ttttgtcttactgacagtgtcttttgcctcgcagaccctttgcaatttta
tgaggtcccatttgtcaaatcttgatctcacagcacaagccattgctgtt
ctgtttaggaatttttttcctgtgctcatatcttcgaggcttttccccac
tttctcctctattaatttcagtgtctctggtttgtgtgtggaggtctttc
atccacttagacttgagctttgtacaaggagataaggagataagaatgga
ccaattcacattcttctacataaaaaccaccagttgtaccagcaccattt
gttgaaaatgctgtgttttttccactggatggttttagttcccttgtcaa
agatcaagtgaccataggtgtgttgatacatttctgggtcttcaattctg
ttccattgatctacctctctgtcactgtaccagtaccatgcagtttttat
cataattgctctgtagtacagctttgggtcaggcatggtgattcctccag
aggttcttttattgttgagaatagtttttgatatcctaggtttcttatta
ttccagatgaatttgcaaattgccctttctatctcagtgaagaattgagt
tggaattttgatggggactgcattgaatctgtagattgctttagttggga
tagtcatttttactatattaatcctgccaatccatgagtatgggagatct
ttccatcttctgagaacttcttcaatttctttcttcagagacttgaagtt
cttatcatacagatctttcacttccttagttagagtcacaccaaggtttt
ttatatcatttgtgactattgtgaaaggtgtgtttccctaattccttttc
agtccatttatcatttgtgtagacaatgccattgattactggagttaatt
tatatcagctactgtccgaagctgtttacaggttagagagttctggtgga
atttttggggctccttatatataat
gaattctcctctaaaaaaacagactgggaggaagaagcagctcattacca
gccagataaagtgctagctagtcggtcaagaaaaaagccaaaagcggctg
gcgaaagccagcatgctgttcagcctccgggcagtcggcttcaaggtccg
ccctatgcggagcccccgccctgcgtagtgcgtcagccctgcgcagagag
acaatgcacagagagacaatgcgcagagagacaatgcgcagagaggcaat
gcacagactcattcattcccagagaggaacaaagaaaaatacaacaggca
tttccggtctttgaaggagccgagggtgggcgtgtccatgctccggtaga
atacgtgcagattaaagaacttgccgagtcggtccgtaaatacggaacca
atgctaattttaccttggtgcagttagacaggcttgccggcatggcacta
actcctgccgactggcaaacgattgtaaaagccgctctccctagtatgga
caaatatataaaatggagagcgctttggcatgaggctacacaagcacagg
cccgaacaaacgcagctgctttgactccagagcagagagattggactttt
gacttgttaacgggtcagggagcttattctgctgatcagacaaactacca
ttggggagcttatgcccaaatttcctccacggctattagggcctgaaagg
cgctctcccgagcaggtgaagccactgggcaattaacaaagatcgtccag
ggacctcaggagtccttctcagattttgtggccaaaatgacagaggcagc
agagcgtatttttggagactcagagcaagccacacctctggtagaacagc
tcatctatgagcaagccacaaaggagtgccgagcggccatagccccaaga
aagaacaaaggcttacagactggctcaggtttgtcgagagcttgggggac
ctctcagcaatgcaggttagcggctgcatccttcaatcccaaaccgctca
tgggcagaatgatcagaggacatgttttactgcggaaagcctgggcatct
aagaaagatgcagagctcagataacaggaggactcttcccctctttgctc
taagtgtggcagggttatcatgaggcgacagtggtgcgctgtggaggcat
tagggcagatcctcccactgaatgcatcgcttatgtgcaaaacggtcatc
ggtccctcggtcctaaggccctctaggattaggtagactgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776113_142776646
seq2: B6Ng01-051C09.b_647_1170 (reverse)

seq1  AGTATATATAAGTGACCCCAAAAATTCCACCAGAGAACTCCTAAACCTGA  50
      | ||||||||||   ||||||||||||||||  |||||||   |||||| 
seq2  ATTATATATAAGGAGCCCCAAAAATTCCACC--AGAACTCTCTAACCTG-  47

seq1  TAAACAGCTTCGGTGAAGTAGCTGGATATAAAATAAACTCAAACAAGTCA  100
      |||||||||||||   ||||||| ||||| |||| ||||| |  || |||
seq2  TAAACAGCTTCGG-ACAGTAGCT-GATAT-AAATTAACTCCAGTAA-TCA  93

seq1  ATGGCCTTTCTCTATACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGA  150
      |||| | || |||| |||||  |||||  | |||| |||| |||||||||
seq2  ATGG-CATTGTCTACACAAATGATAAATGGACTGA-AAAGGAATTAGGGA  141

seq1  AACAACACCCTTCTCAATAGTCACAAATAATATAAAATATCTCGGCGTGA  200
      ||| ||||| ||| |||||||||||||| |||||||| | || || ||||
seq2  AAC-ACACCTTTCACAATAGTCACAAATGATATAAAAAACCTTGGTGTGA  190

seq1  CTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAGTCTCTG  250
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTCTAACTAAGGAAGTGAAAGATCTGTATGATAAGAACTTCAAGTCTCTG  240

seq1  AAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAGGATCTCCCATGCTC  300
      |||||||||||| |||||| ||||||||||||||| |||||||||| |||
seq2  AAGAAAGAAATTGAAGAAGTTCTCAGAAGATGGAAAGATCTCCCATACTC  290

seq1  ATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCCAAAAGCAA  350
      ||||||||||||||| || || ||||||||| |||||    | |||||||
seq2  ATGGATTGGCAGGATTAATATAGTAAAAATGACTATCCCAACTAAAGCAA  340

seq1  TCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAAC  400
      ||||||||||||||||| ||||||||||||||||||||||||||||||  
seq2  TCTACAGATTCAATGCAGTCCCCATCAAAATTCCAACTCAATTCTTCACT  390

seq1  GAATTAGAAGGAGCAATTTGCAAATTCATCTGGAATAACAAAAAACCTAG  450
      ||  ||||| | |||||||||||||||||||||||||| || ||||||||
seq2  GAGATAGAAAGGGCAATTTGCAAATTCATCTGGAATAATAAGAAACCTAG  440

seq1  GATAGCAAAAAGTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCA  500
      |||| |||||| | |||||||  |||||||||||||||| ||||||||||
seq2  GATATCAAAAACTATTCTCAACAATAAAAGAACCTCTGGAGGAATCACCA  490

seq1  TGCCTGACCTAAAGCTTTACTACAGAGCAATTGT  534
      ||||||||| |||||| ||||||||||||||| |
seq2  TGCCTGACCCAAAGCTGTACTACAGAGCAATTAT  524