BAC Information

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BAC

Clone NameB6Ng01-052M16
Chromosome2 (Build37)
Map Location 34,249,923 - 34,375,399
singlet/doubletdoublet
Overlap geneLOC665948, Mapkap1
Upstream geneZbtb34, Zbtb43, LOC676764, Lmx1b, LOC100041918, 2610528K11Rik, LOC100041931, Pbx3
Downstream geneLOC623448, LOC623269, Gapvd1, Hspa5, Rabepk, Fbxw2, EG623370, Psmd5, D730039F16Rik, Phf19, Traf1, Hc, AI182371, Rab14, Gsn, Stom, LOC654354, 4930568D16Rik, 4930402F06Rik, Ggta1, LOC666042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052M16.bB6Ng01-052M16.g
ACCDH876037DH876038
length1,135630
definitionDH876037|Mus musculus domesticus DNA, BAC clone: B6Ng01-052M16, 5' end.DH876038|Mus musculus domesticus DNA, BAC clone: B6Ng01-052M16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,374,254 - 34,375,399)(34,249,923 - 34,250,552)
sequence
gaattctcacacatcgcatgctgcacaatccaatcttcctaagtctcaga
caaaggagtctgtctgaaagggacaggaggagctccttcagcgcaatctc
tcatgaggactacgagagtttgctggtttcaaacagcagggggtgccaaa
gggatcactattaatcccaggagatagccaggagagggagattagaggtg
taggttagcctcacttaggttaggctcacccgcagctgcacgggtcccac
ctgcaggccttagcattcctcaatggaaagtggaagcaacaattcagagc
tgaatgagctgctgctgcagatgatgcgcagacatcttagcaacaccact
gtctgctacaaatagtgcagactcctgaggcagcaatacttagactcatt
gctgctctgaatcaacaggctttaagagcgatggttggaacccctcttgg
gtcttgttaggcaatctattaataaaggtagatataacattacatataga
gttatttaatgatctgttgattttcaatataagagagtctttttatattc
caatgaattttattttatgtacgtacacatacttttctgagaatgatgtt
ttaaggctttcccagattgacagaagcacagagcaggcagagtctaatgg
aaggcaacagaggaaaaacaaagagagtctgaaccagttggagagaaaag
tattttaagtcacaatagaaaaatggccacaatatgcattttcatttagg
ctggtgtccttgattagaaaggggcaaacccagatactccttcccaggct
cctagtcaccactgctcacagaggtgacatctgtagacatgctgttccca
gatctatcacaggctgcacatgtcctgcacatgtcctatgtacagaagca
caaaacagcaatgcacatgttcccaaattgttctgcaagtaaccaggtga
gcagatgttccaggtaacaccacatattccctgataaacaagctagaagt
caggtgaccccaccagaagtacctcacattcgaacaagagcggacttctt
tgagtcagaccagagaggagtatttttcaccaggccaaagtactcgagcc
aactatgatgggctcattggaatccatggcggaaa
gaattcttaccttaggggtcaactgaagggattggaatatgtcacatata
ggaagtactgcacctagagcttctggctacatttgagttcagtgttgaaa
cagtctgttgcctctgccttacacgtcaggcttcacacatgcatacaggt
gtcacacaggcagggcaagggctggacctccaagccacattcccagagga
gaggcttggatgcttctttgagctaggaagacaggggaagatcagtattc
aaaattcggagtggctaatcatttgtaaactttgtattgtatcctattga
tgctctcaaatctgtccttcatattatcctaggattttagggagaagatt
tagacagggccttggactatctaagattcttgctggggagagactgacca
cactgctgggatggaagagccaagtacaaatctgtgttctatgtttctct
gacttgagagaatgtcaggttttcaccttaaagaggtattttcttatctg
ttttgtcatagtataaacattactccttcaaaacaccaaatggccaagtc
cttacacatgcagtatctccctgtggataatcactgttgtgatttgggaa
tgtgtgtgcacgtgtgtgtggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_34374254_34375399
seq2: B6Ng01-052M16.b_45_1179 (reverse)

seq1  TTTCCGCCACTGGATTCCAATGAGCCCATTCATAAGTTTGGCTTCAGTAC  50
      ||||||||| |||||||||||||||||| |||||   ||||||  |||||
seq2  TTTCCGCCA-TGGATTCCAATGAGCCCA-TCATA--GTTGGCTCGAGTAC  46

seq1  TTTGGCCCTGGTTGAAAAATACTCCTCTCCTGGTCTGACCTCCAAAGAGT  100
      ||||| ||||| |||||||||||||||| ||||||||| ||| ||  |||
seq2  TTTGG-CCTGG-TGAAAAATACTCCTCT-CTGGTCTGA-CTCAAAGAAGT  92

seq1  -CGCTCTTTGTTCGAATGTGA-GTACTTCCTTGGT-GTGTCACCTGACCT  147
       ||||| |||||||||||||| |||||||  |||| | ||||||||| ||
seq2  CCGCTC-TTGTTCGAATGTGAGGTACTTC--TGGTGGGGTCACCTGA-CT  138

seq1  TCTAGCCTTGTTTATCAGGGGAATTATGT-GTGTTACCTGGAACATCTGC  196
      ||||| ||||||||||||||  | ||||| ||||||||||||||||||||
seq2  TCTAG-CTTGTTTATCAGGG--AATATGTGGTGTTACCTGGAACATCTGC  185

seq1  TCACCTGGTTACTTGCAGAACAATTTGGGAACATGTGCATTGCTGTTTTG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGGTTACTTGCAGAACAATTTGGGAACATGTGCATTGCTGTTTTG  235

seq1  TGCTTCTGTACCTAGGACATGTGCAGGACATGTGCAGCCTGTGATAGATC  296
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTGTACATAGGACATGTGCAGGACATGTGCAGCCTGTGATAGATC  285

seq1  TGGGAACAGCATGTCTACAGATGTCACCTCTGTGAGCAGTGGTGACTAGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACAGCATGTCTACAGATGTCACCTCTGTGAGCAGTGGTGACTAGG  335

seq1  AGCCTGGGAAGGAGTATCTGGGTTTGCCCCTTTCTAATCAAGGACACCAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGGAAGGAGTATCTGGGTTTGCCCCTTTCTAATCAAGGACACCAG  385

seq1  CCTAAATGAAAATGCATATTGTGGCCATTTTTCTATTGTGACTTAAAATA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATGAAAATGCATATTGTGGCCATTTTTCTATTGTGACTTAAAATA  435

seq1  CTTTTCTCTCCAACTGGTTCAGACTCTCTTTGTTTTTCCTCTGTTGCCTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTCTCCAACTGGTTCAGACTCTCTTTGTTTTTCCTCTGTTGCCTT  485

seq1  CCATTAGACTCTGCCTGCTCTGTGCTTCTGTCAATCTGGGAAAGCCTTAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAGACTCTGCCTGCTCTGTGCTTCTGTCAATCTGGGAAAGCCTTAA  535

seq1  AACATCATTCTCAGAAAAGTATGTGTACGTACATAAAATAAAATTCATTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCATTCTCAGAAAAGTATGTGTACGTACATAAAATAAAATTCATTG  585

seq1  GAATATAAAAAGACTCTCTTATATTGAAAATCAACAGATCATTAAATAAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATAAAAAGACTCTCTTATATTGAAAATCAACAGATCATTAAATAAC  635

seq1  TCTATATGTAATGTTATATCTACCTTTATTAATAGATTGCCTAACAAGAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATGTAATGTTATATCTACCTTTATTAATAGATTGCCTAACAAGAC  685

seq1  CCAAGAGGGGTTCCAACCATCGCTCTTAAAGCCTGTTGATTCAGAGCAGC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGGGGTTCCAACCATCGCTCTTAAAGCCTGTTGATTCAGAGCAGC  735

seq1  AATGAGTCTAAGTATTGCTGCCTCAGGAGTCTGCACTATTTGTAGCAGAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTCTAAGTATTGCTGCCTCAGGAGTCTGCACTATTTGTAGCAGAC  785

seq1  AGTGGTGTTGCTAAGATGTCTGCGCATCATCTGCAGCAGCAGCTCATTCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTGTTGCTAAGATGTCTGCGCATCATCTGCAGCAGCAGCTCATTCA  835

seq1  GCTCTGAATTGTTGCTTCCACTTTCCATTGAGGAATGCTAAGGCCTGCAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGAATTGTTGCTTCCACTTTCCATTGAGGAATGCTAAGGCCTGCAG  885

seq1  GTGGGACCCGTGCAGCTGCGGGTGAGCCTAACCTAAGTGAGGCTAACCTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGACCCGTGCAGCTGCGGGTGAGCCTAACCTAAGTGAGGCTAACCTA  935

seq1  CACCTCTAATCTCCCTCTCCTGGCTATCTCCTGGGATTAATAGTGATCCC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCTAATCTCCCTCTCCTGGCTATCTCCTGGGATTAATAGTGATCCC  985

seq1  TTTGGCACCCCCTGCTGTTTGAAACCAGCAAACTCTCGTAGTCCTCATGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCACCCCCTGCTGTTTGAAACCAGCAAACTCTCGTAGTCCTCATGA  1035

seq1  GAGATTGCGCTGAAGGAGCTCCTCCTGTCCCTTTCAGACAGACTCCTTTG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTGCGCTGAAGGAGCTCCTCCTGTCCCTTTCAGACAGACTCCTTTG  1085

seq1  TCTGAGACTTAGGAAGATTGGATTGTGCAGCATGCGATGTGTGAGAATTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGACTTAGGAAGATTGGATTGTGCAGCATGCGATGTGTGAGAATTC  1135

seq1: chr2_34249923_34250552
seq2: B6Ng01-052M16.g_70_699

seq1  GAATTCTTACCTTAGGGGTCAACTGAAGGGATTGGAATATGTCACATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACCTTAGGGGTCAACTGAAGGGATTGGAATATGTCACATATA  50

seq1  GGAAGTACTGCACCTAGAGCTTCTGGCTACATTTGAGTTCAGTGTTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTACTGCACCTAGAGCTTCTGGCTACATTTGAGTTCAGTGTTGAAA  100

seq1  CAGTCTGTTGCCTCTGCCTTACACGTCAGGCTTCACACATGCATACAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGTTGCCTCTGCCTTACACGTCAGGCTTCACACATGCATACAGGT  150

seq1  GTCACACAGGCAGGGCAAGGGCTGGACCTCCAAGCCACATTCCCAGAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACACAGGCAGGGCAAGGGCTGGACCTCCAAGCCACATTCCCAGAGGA  200

seq1  GAGGCTTGGATGCTTCTTTGAGCTAGGAAGACAGGGGAAGATCAGTATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTGGATGCTTCTTTGAGCTAGGAAGACAGGGGAAGATCAGTATTC  250

seq1  AAAATTCGGAGTGGCTAATCATTTGTAAACTTTGTATTGTATCCTATTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCGGAGTGGCTAATCATTTGTAAACTTTGTATTGTATCCTATTGA  300

seq1  TGCTCTCAAATCTGTCCTTCATATTATCCTAGGATTTTAGGGAGAAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCAAATCTGTCCTTCATATTATCCTAGGATTTTAGGGAGAAGATT  350

seq1  TAGACAGGGCCTTGGACTATCTAAGATTCTTGCTGGGGAGAGACTGACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGGGCCTTGGACTATCTAAGATTCTTGCTGGGGAGAGACTGACCA  400

seq1  CACTGCTGGGATGGAAGAGCCAAGTACAAATCTGTGTTCTATGTTTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTGGGATGGAAGAGCCAAGTACAAATCTGTGTTCTATGTTTCTCT  450

seq1  GACTTGAGAGAATGTCAGGTTTTCACCTTAAAGAGGTATTTTCTTATCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGAGAGAATGTCAGGTTTTCACCTTAAAGAGGTATTTTCTTATCTG  500

seq1  TTTTGTCATAGTATAAACATTACTCCTTCAAAACACCAAATGGCCAAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCATAGTATAAACATTACTCCTTCAAAACACCAAATGGCCAAGTC  550

seq1  CTTACACATGCAGTATCTCCCTGTGGATAATCACTGTTGTGATTTGGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACACATGCAGTATCTCCCTGTGGATAATCACTGTTGTGATTTGGGAA  600

seq1  TGTGTGTGCACGTGTGTGTGGGGGGGGGGG  630
      ||||||||||||||||||||||||||||||
seq2  TGTGTGTGCACGTGTGTGTGGGGGGGGGGG  630