BAC Information

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BAC

Clone NameB6Ng01-053E21
Chromosome2 (Build37)
Map Location 34,998,431 - 34,999,124
singlet/doubletsinglet
Overlap genenone
Upstream genePbx3, LOC665948, Mapkap1, LOC623448, LOC623269, Gapvd1, Hspa5, Rabepk, Fbxw2, EG623370, Psmd5, D730039F16Rik, Phf19, Traf1, Hc, AI182371
Downstream geneRab14, Gsn, Stom, LOC654354, 4930568D16Rik, 4930402F06Rik, Ggta1, LOC666042, LOC100042194, Dab2ip, Ttll11, Ndufa8, 1700010A17Rik, Lhx6, Rbm18, LOC100042236, Mrrf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053E21.bB6Ng01-053E21.g
ACCDH876390DH876391
length1,169982
definitionDH876390|Mus musculus domesticus DNA, BAC clone: B6Ng01-053E21, 5' end.DH876391|Mus musculus domesticus DNA, BAC clone: B6Ng01-053E21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatactgaatgactgagaagcacttgaaaaatgc
tcaacatccttaatcatcagggaaatgcaaatcagaacaaccctgatatt
ctaccttacaccagtcagaatggctaagatcaaaaattcaagtgacagca
gatgctggcgaggatgtggagaaagaggaacactcctccattgctggtgg
gattgcaagctggtatagccactctggaagtcagtctggcggttcctcag
aaaattgggcatagtactactggaagatccagcaatacctctcctgggca
tatacccataagatgttccagctggtaataaggacacatgctccactatg
ttcatagcagccttatttataatatccagaagctggaaagaaccctcaat
agaggaatgaatacagaaaatgtggtacatttacacaatggagtactact
cagctattaaaaacaatgaatttatgaaattcttgggcatatggatgtat
ctggaggatatcatcctgagtgaggtaacccaatcacaaaagaagtcact
tgatatgcactcactgataagtggatattagcccagaaatttagaatacc
caagacacaatttgcaaaacacaagaaaatcaagaaggaggaagaccaat
gtgtggatacttcattcctccttagaatagggaacaaaatacccatggaa
ggagttacagagacaaagtttggagctaagacgaaaggatggaccaccca
gagactaccccacccgggcatccatcccataatcagccaccaaatgcaga
cactattacatacattagcaagattttgctgaaaggaccctaatatagct
gtctcttgtgaggctatgccagtgcctggcaaatacagaagtggatgctc
acagtcatctattggatggaacacaggacccccaatggagaagctagaga
aagcacccaaggagctgaaggagtctgcaaccctattagtggaacaacat
atgaactaaccagtacccccagagctcatgtctctagctgcttatgtagc
agaagaaggtcgccatccattggaaaagatgctcttggtcttgcaacttt
atatatgctctcatacaggaaccccaggccagaatgcatgaatatggtat
agatacatgccgtgccagg
gaattcattactaacaaatgcataaacatatcttggctacagaatgaaac
tcatatgatgcctccttcaaatacaaagaattgctaaaacatccccacag
tataaagaaaaacgtttatatatcctaagtgatgaatgctactcccctga
acgtccctaacgacctcagggtcactctcctgcacatccagtgcagcacc
tacaagggcacacccatttttaagggcctatggcatttagaggtctcatc
tgtagactgactccctagtaccctgagacagccttctctggacaagagat
tgtcctcccctacttagcagcttttcaactttcagaagaaaccatacttt
gtggtgtgagagacccacaagaagctccagctcatagacaaacaggccat
cagggtaacaaccactctacagagcaccgagatgccaagttctttacagt
ctttcttgtgtttttgtgtaccatcgtgtttctgataaatcacatcagag
agtcagtatttcattaaaaaataagctttgtgttaaggtaatttttcctt
actataataaatgtcaagaagactctcgcacacagtgggggttccccttc
tggccctgatgaggcacaaaccacacccaaacacccgtttacagagagag
cctttactaagttggggaagaaaattaaagtggctgccttctgatacaag
caggaaaatagcagcaaatgaccttgcaggtgtaattttttaagtagaga
aaaagtggtagtctgtgttagaatgggctacaatgtggtagcatatttta
actgggcatgttagatgacccaaagggggcttttaagggttcctttcttc
cttcctaatgatataaattctctacctgaatgtatgcttacatgccagag
gaggataccatatcctagtatggatggttgtgagccaccatgtggttgct
gggactgaactcagacccctgaagagcagcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_34998431_34999124
seq2: B6Ng01-053E21.g_67_760 (reverse)

seq1  TCAGAAGGCAGCCACTTTAATTTTCTTCCCCAACTTAGTAAAGGCTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGGCAGCCACTTTAATTTTCTTCCCCAACTTAGTAAAGGCTCTCT  50

seq1  CTGTAAACGGGTGTTTGGGTGTGGTTTGTGCCTCATCAGGGCCAGAAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAACGGGTGTTTGGGTGTGGTTTGTGCCTCATCAGGGCCAGAAGGG  100

seq1  GAACCCCCACTGTGTGCGAGAGTCTTCTTGACATTTATTATAGTAAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCCCACTGTGTGCGAGAGTCTTCTTGACATTTATTATAGTAAGGAA  150

seq1  AAATTACCTTAACACAAAGCTTATTTTTTAATGAAATACTGACTCTCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACCTTAACACAAAGCTTATTTTTTAATGAAATACTGACTCTCTGA  200

seq1  TGTGATTTATCAGAAACACGATGGTACACAAAAACACAAGAAAGACTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTTATCAGAAACACGATGGTACACAAAAACACAAGAAAGACTGTA  250

seq1  AAGAACTTGGCATCTCGGTGCTCTGTAGAGTGGTTGTTACCCTGATGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTTGGCATCTCGGTGCTCTGTAGAGTGGTTGTTACCCTGATGGCC  300

seq1  TGTTTGTCTATGAGCTGGAGCTTCTTGTGGGTCTCTCACACCACAAAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTCTATGAGCTGGAGCTTCTTGTGGGTCTCTCACACCACAAAGTA  350

seq1  TGGTTTCTTCTGAAAGTTGAAAAGCTGCTAAGTAGGGGAGGACAATCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCTTCTGAAAGTTGAAAAGCTGCTAAGTAGGGGAGGACAATCTCT  400

seq1  TGTCCAGAGAAGGCTGTCTCAGGGTACTAGGGAGTCAGTCTACAGATGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGAGAAGGCTGTCTCAGGGTACTAGGGAGTCAGTCTACAGATGAG  450

seq1  ACCTCTAAATGCCATAGGCCCTTAAAAATGGGTGTGCCCTTGTAGGTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTAAATGCCATAGGCCCTTAAAAATGGGTGTGCCCTTGTAGGTGCT  500

seq1  GCACTGGATGTGCAGGAGAGTGACCCTGAGGTCGTTAGGGACGTTCAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGGATGTGCAGGAGAGTGACCCTGAGGTCGTTAGGGACGTTCAGGG  550

seq1  GAGTAGCATTCATCACTTAGGATATATAAACGTTTTTCTTTATACTGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGCATTCATCACTTAGGATATATAAACGTTTTTCTTTATACTGTGG  600

seq1  GGATGTTTTAGCAATTCTTTGTATTTGAAGGAGGCATCATATGAGTTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTTTTAGCAATTCTTTGTATTTGAAGGAGGCATCATATGAGTTTCA  650

seq1  TTCTGTAGCCAAGATATGTTTATGCATTTGTTAGTAATGAATTC  694
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAGCCAAGATATGTTTATGCATTTGTTAGTAATGAATTC  694