BAC Information

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BAC

Clone NameB6Ng01-053H03
Chromosome2 (Build37)
Map Location 43,592,204 - 43,708,062
singlet/doubletdoublet
Overlap geneArhgap15
Upstream geneLOC100041228, LOC100041245, Kynu
Downstream geneGtdc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053H03.bB6Ng01-053H03.g
ACCDH876489DH876490
length644739
definitionDH876489|Mus musculus domesticus DNA, BAC clone: B6Ng01-053H03, 5' end.DH876490|Mus musculus domesticus DNA, BAC clone: B6Ng01-053H03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,707,419 - 43,708,062)(43,592,204 - 43,592,942)
sequence
gaattcattcctcttagtagctcttcaaggtgaatgaggtgtcagtataa
ctgaggagaaaaatgaagcttactgagactgtgtcctacctaataagggc
acacagtcatgtgggagagatttaggggtttacctctgaagcccacctcc
ggtctgaaggatcagctgttctggagcaggaccatgcacctttctcttat
gcatgctctctgctgagcttcatggcaggagttagaaggagagaacacag
tcttggaaaagcattagacctctttctcctagaagcagagctgccttttt
tggtgagtccagccttctgtaccactttctgcagtctctgtgtgttccta
caccagtggggaacagctaaagcttctgtcttcataataacattgggcac
atagaacaatgttaaccctcccatgaaggagggttctttcttgaacttcc
taccattcttccttccttccttcttccattcttcccttccttccttcttc
cattcttcccttccttccttctttccttccttccttccttccttccttcc
ttccttcccttcttccttccttccttcttcccttcttcccttcttccctt
cttcccttccttccttcgttcgttccttcctttcttccttcctt
gaattcttctggtgtcagaggccaccactgggtctaatagcccccaggcc
aacacggtgtcccttttctacactccacagcctggcttaaaagcctcttt
tctgtatcatcccttcctcttcctcctggaacccagaaaacctgcctctt
tgtctttgcccagtgactaccttctgctgtctttatttacccaatcaaac
aattagggaatctccttctatatctctgccactctgttctctgttttatt
gagaattctagctagagcatttggcaagagaatgaatgaatgaatgaatg
aatgaatgagagggagggaggaaggaagaaggggaactcagataagaaaa
tagttaaatggatttttttcagattagataatctggcggaggaaaaaaaa
acccacagaattcaccaaaactgtctgaggtaagcaacagttgaagtact
cagttaatctcttggggtatgtggtccctgttaagttgatcatgcaatgg
tggatgactgcagacccagaagttatgaacaacaaaacctggatttgata
gacacaaagaaaagaaagaagacaaagttagtcaaaagtggacatgtacg
gaggtaggtgaggatctaggaggagttagccagaggagtccgtatgaata
tagatcaaaatacagttcaaaattctcagttaatttaatagtgtattata
aaagggctgtggaactatatagagctgttcaaacgaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_43707419_43708062
seq2: B6Ng01-053H03.b_44_687 (reverse)

seq1  AAGGAAGGAAGAAAGGAAGGAAGGAAAGAAGGAAGGAAGGGAAGAAGGGA  50
      |||||||||||||||||||||| ||| |||||||||||||||||||||||
seq2  AAGGAAGGAAGAAAGGAAGGAACGAACGAAGGAAGGAAGGGAAGAAGGGA  50

seq1  AGAAGGGAAGAAGGGAAGAAGGAAGGAAGGAAGAAGGGAAGGAAGGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGAAGAAGGGAAGAAGGAAGGAAGGAAGAAGGGAAGGAAGGAAGG  100

seq1  AAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGGAAGAATGGAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGGAAGAATGGAAGAA  150

seq1  GGAAGGAAGGGAAGAATGGAAGAAGGAAGGAAGGAAGAATGGTAGGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAAGGGAAGAATGGAAGAAGGAAGGAAGGAAGAATGGTAGGAAGT  200

seq1  TCAAGAAAGAACCCTCCTTCATGGGAGGGTTAACATTGTTCTATGTGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAAGAACCCTCCTTCATGGGAGGGTTAACATTGTTCTATGTGCCC  250

seq1  AATGTTATTATGAAGACAGAAGCTTTAGCTGTTCCCCACTGGTGTAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTATTATGAAGACAGAAGCTTTAGCTGTTCCCCACTGGTGTAGGAA  300

seq1  CACACAGAGACTGCAGAAAGTGGTACAGAAGGCTGGACTCACCAAAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGAGACTGCAGAAAGTGGTACAGAAGGCTGGACTCACCAAAAAAG  350

seq1  GCAGCTCTGCTTCTAGGAGAAAGAGGTCTAATGCTTTTCCAAGACTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTCTGCTTCTAGGAGAAAGAGGTCTAATGCTTTTCCAAGACTGTGT  400

seq1  TCTCTCCTTCTAACTCCTGCCATGAAGCTCAGCAGAGAGCATGCATAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTTCTAACTCCTGCCATGAAGCTCAGCAGAGAGCATGCATAAGA  450

seq1  GAAAGGTGCATGGTCCTGCTCCAGAACAGCTGATCCTTCAGACCGGAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTGCATGGTCCTGCTCCAGAACAGCTGATCCTTCAGACCGGAGGT  500

seq1  GGGCTTCAGAGGTAAACCCCTAAATCTCTCCCACATGACTGTGTGCCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCAGAGGTAAACCCCTAAATCTCTCCCACATGACTGTGTGCCCTT  550

seq1  ATTAGGTAGGACACAGTCTCAGTAAGCTTCATTTTTCTCCTCAGTTATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGTAGGACACAGTCTCAGTAAGCTTCATTTTTCTCCTCAGTTATAC  600

seq1  TGACACCTCATTCACCTTGAAGAGCTACTAAGAGGAATGAATTC  644
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACCTCATTCACCTTGAAGAGCTACTAAGAGGAATGAATTC  644

seq1: chr2_43592204_43592942
seq2: B6Ng01-053H03.g_69_807

seq1  GAATTCTTCTGGTGTCAGAGGCCACCACTGGGTCTAATAGCCCCCAGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGGTGTCAGAGGCCACCACTGGGTCTAATAGCCCCCAGGCC  50

seq1  AACACGGTGTCCCTTTTCTACACTCCACAGCCTGGCTTAAAAGCCTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACGGTGTCCCTTTTCTACACTCCACAGCCTGGCTTAAAAGCCTCTTT  100

seq1  TCTGTATCATCCCTTCCTCTTCCTCCTGGAACCCAGAAAACCTGCCTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATCATCCCTTCCTCTTCCTCCTGGAACCCAGAAAACCTGCCTCTT  150

seq1  TGTCTTTGCCCAGTGACTACCTTCTGCTGTCTTTATTTACCCAATCAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTGCCCAGTGACTACCTTCTGCTGTCTTTATTTACCCAATCAAAC  200

seq1  AATTAGGGAATCTCCTTCTATATCTCTGCCACTCTGTTCTCTGTTTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGGAATCTCCTTCTATATCTCTGCCACTCTGTTCTCTGTTTTATT  250

seq1  GAGAATTCTAGCTAGAGCATTTGGCAAGAGAATGAATGAATGAATGAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTCTAGCTAGAGCATTTGGCAAGAGAATGAATGAATGAATGAATG  300

seq1  AATGAATGAGAGGGAGGGAGGAAGGAAGAAGGGGAACTCAGATAAGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATGAGAGGGAGGGAGGAAGGAAGAAGGGGAACTCAGATAAGAAAA  350

seq1  TAGTTAAATGGATTTTTTTCAGATTAGATAATCTGGCGGAGGAAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAAATGGATTTTTTTCAGATTAGATAATCTGGCGGAGGAAAAAAAA  400

seq1  ACCCACAGAATTCACCAAAACTGTCTGAGGTAAGCAACAGTTGAAGTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACAGAATTCACCAAAACTGTCTGAGGTAAGCAACAGTTGAAGTACT  450

seq1  CAGTTAATCTCTTGGGGTATGTGGTCCCTGTTAAGTTGATCATGCAATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAATCTCTTGGGGTATGTGGTCCCTGTTAAGTTGATCATGCAATGG  500

seq1  TGGATGACTGCAGACCCAGAAGTTATGAACAACAAAACCTGGATTTGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGACTGCAGACCCAGAAGTTATGAACAACAAAACCTGGATTTGATA  550

seq1  GACACAAAGAAAAGAAAGAAGACAAAGTTAGTCAAAAGTGGACATGTACG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAAAGAAAAGAAAGAAGACAAAGTTAGTCAAAAGTGGACATGTACG  600

seq1  GAGGTAGGTGAGGATCTAGGAGGAGTTAGCCAGAGGAGTCCGTATGAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAGGTGAGGATCTAGGAGGAGTTAGCCAGAGGAGTCCGTATGAATA  650

seq1  TAGATCAAAATACAGTTCAAAATTCTCAGTTAATTTAATAGTGTATTAAA  700
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TAGATCAAAATACAGTTCAAAATTCTCAGTTAATTTAATAGTGTATTATA  700

seq1  AATGGGCTGTGGAACTATATAGAGCTGTCAAAACGAAAA  739
      || |||||||||||||||||||||||||  |||||||||
seq2  AAAGGGCTGTGGAACTATATAGAGCTGTTCAAACGAAAA  739