BAC Information

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BAC

Clone NameB6Ng01-054D07
Chromosome2 (Build37)
Map Location 142,776,691 - 142,777,220
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054D07.bB6Ng01-054D07.g
ACCDH877020DH877021
length9601,220
definitionDH877020|Mus musculus domesticus DNA, BAC clone: B6Ng01-054D07, 5' end.DH877021|Mus musculus domesticus DNA, BAC clone: B6Ng01-054D07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gcagaatttcactgcactgactcactatattggagaggatctgctgaact
ctttgtttggttctgagccccactttttaatggggttatttgattttctg
aagtccaccttcttgagttctttatatatgttggatattagtcccctatc
tgatttaggataggtaaagatcctgttggtggtctttttgtcttattgac
ggtgtctattgccttgcagaaactttggagtttcattaggtcccatttgt
caattctcgatcttacagcacaagccattgctgttctgttcaggaatatt
tcccctgtgcccatatcttcaaggcttttccccactttctcctctataag
tttcagtgtctctggttttatgtgaagttccttgatccacttagatttga
ccttagtacaaggagataagtatggatcgatttgcattcttctacatgat
aacaaccagttgtgccagcaccaattgttgaaaatgctgtctttcttcca
ctggatggttttagctcccttgtcgaagatcaagtgaccataggtgtgtg
ggttcatttctgggtcttcaattctattccattggtctactggtctgtct
ctataccagtaccatgcagattttatcacaattgctctgtagtaaagctt
tagatcaggcatggtgattccaccagaggttcttttatccttgagaagac
tttttgctatcctaggttttttgttattccagattaatttgcaaattgct
ccttctaattcgttcaagaattgagttggaatttgatggggattgcattg
aatctgtagattgcttttggcaagatagccatttttacaatgttgatcct
gccaatccatgagcatgggagatctttccatcttctgagatcttctttaa
tttctttcttcagagatttgaagttttatcatatagatctttcacttcct
tagttagagt
gaattccatttagaattgaacatgaacagtctcttattctgtgcttctgt
gttgattttctgctgccagatgaagcttctcttatgagggttgaataatg
cattggcctatttccataggaatatgccattagggatcattttattttta
ttaatttgagcagaatattattagtgggttcccctataagacacagaact
atttagtcttgggttcagaacaggttcttagcctcattggcagtgtcagt
tttcatctcctgtagtgagctttaaaaaatccaattaaaaaaaataacaa
gttggttggttactcctgcaatatacaaacctaccagaaagcatatcagt
cagggagttcattattgtagctcccagattacaaatgtgggtgacaatga
tgattacatttttttcctagtagtattcacaacattttctagcactgtga
atgctagccaataaggggtgaaacttccagttgagtaatagctatatttc
tacatgttctatgacataagtgtattgtggcttcaacaataaactcttac
tgttgagtgttataggggaatgtgtagcattgacaatagcctgtaatatt
tgggggaatggggtctatgggagccaattagtcaacaactcaataatatg
taacatattaatgcttttgccctataataaaatatgataggatgatttaa
acaacagcaaaaatgttggagattaggcataagatccttctatgtatatt
attgtagtttgggtttctattactgtgattaaaatgtcataactcaaatc
agcccatgccttaaatccaatcaaaaagtggtttggttactcccataaca
catgcaccactatcatagcagtgaacgtatcttctaaggctgattgttgt
tgctgctcataggattcacaggtgcattagacagttgattaaattcctta
gtgtcatacacagcaccttttagtgctatgaatactagccagtaaggagg
atattttagtttgacaccagatttcttcacatcttgggactcagtatgtg
ggtgtcttcacaacgaagtttcccattaattttgtggggaaaacaaaaga
gcaatggatgggatccactggccatcaaacagagaggtaaccctgtcttg
gtctcatatttgttgtagttctcgagtcgaaaatagatgtttctcttgct
gaaacacacactttccagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776691_142777220
seq2: B6Ng01-054D07.b_64_583 (reverse)

seq1  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCAC  50

seq1  TTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGACAGCAT  100
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCAT  100

seq1  TTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGC  150

seq1  GAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATC  200
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATC  200

seq1  AAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGT  250

seq1  GGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCTGAACAGAA  300
      ||||||||||||||||||||||||||||||||| | ||||||||||||||
seq2  GGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAATATTCCTGAACAGAA  300

seq1  CAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATG  350

seq1  AAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAG  400
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAACTCCAAAGTTTCTGCAAGGCAATAGACACCGTCAATAAGACAAAAAG  400

seq1  ACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  450
      |||||||||          |||||||||||||||||||||||||||||||
seq2  ACCACCAAC----------AGGATCTTTACCTATCCTAAATCAGATAGGG  440

seq1  GACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAA  490

seq1  TCAAATAACCCCATTAAAAAATGGGGCTCA  530
      |||||||||||||||||||| |||||||||
seq2  TCAAATAACCCCATTAAAAAGTGGGGCTCA  520