BAC Information

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BAC

Clone NameB6Ng01-055A16
Chromosome2 (Build37)
Map Location 8,065,670 - 8,066,805
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040648
Downstream geneLOC672230
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055A16.bB6Ng01-055A16.g
ACCDH877614DH877615
length1,1201,101
definitionDH877614|Mus musculus domesticus DNA, BAC clone: B6Ng01-055A16, 5' end.DH877615|Mus musculus domesticus DNA, BAC clone: B6Ng01-055A16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtatcctgattctattcttgattcttcttcttggagtaaaa
ttttccactgtttttcagtgacttgtattgaattacttcatgtcatcttt
aaatgtaaaacaaaacaaaacaaacaaaacaacatgacatcttcagtcct
taaactcttagaaacttcttctgctttgagctcttttagctttctccaat
aatagagtgtctattttatcattccttccagaagctactattaatctttc
cattgattcaatggccatgaaattttcctctattttcatcacagtagatg
gttgtgtttcattgaggatgcaggactgtcaggcttctaacattcttcaa
agaattttctccattccttgtagcctgcatcatcaagcaaaatttcagtt
ggattcaattggatgcactcactttcagtgcttagtaaagtctgtagagt
aaaatgattgcccacagagataatttcccctactgtgtgtgtgtgtaact
tttaggtgtttgacaatttcatgacagtctttatcaattccttatcaaaa
tgatgtagctaaattttctcaccagactacatggtagctgaatttttcac
ttgtgttctattagagatgaattggtctccacattccatttcaacttatg
gacattttattttcttgaggttttattgcagttattacctggtgactcat
agtctttcgttattgctagaaaattcactcttggtatatggggagagctg
tcctttctacctttccacattctaggaaaggtcaataaatatgttctaat
attgtgtctaagcactactttgttacagtcagaaaatttgcctgtaaata
aagccatgaaaatttataagagccatgcctgtagcttagggaacttttca
ggatctgttcagatgtctgttgatgcttttaagtctgtgctattctgtca
gaaataagtctatcatgtcacacaaattatttggaaaattatagataccc
caaatgctactatatccataatttgatgtgatgaatctcaaataagtaga
gtattatagctgtttgggggttgtatatttccttaccagtggaaatctct
tctgcaactaaaatgtttcc
gaattctttgtttagctctgtaccccatttttaagaattatttggttccc
tggagtctaacttcttgagttctttattatattggatattagctgtctat
tgggtgtaggattggtaaagatactttcccaatgtgttggttgccatttt
gtcctattgacagtgtcctttcccttacagaagctttgaaattttatgag
gtcccatttgtcaattcttgatcttagctctcccttggtcattgattggc
aggattaatataataaaaatggctatcttgcagaaagcaatctacagatt
cagtgtaattcctgtcaaaattccaactcagatcttcatagttagagcaa
tttgaaaatacatctggaataacaaaaaacctaggatagggaacactatt
cttaacaataaaagaacttctggtggaatcatcatccctgacctcaagct
gtgctacagagcaattgtgattaaaactgcatggtattggtacaatgaca
gacaggtagatcaatggaatagaatttaagatccagaaatgaacccacac
acccatggtcacttgatctttgacaaaggagctaaaaccatccagtggca
aaaagacaacattttcaaaaaaaaaaaatggtgctggctcaactggtggt
taacatgtagaggaatgcaaattgatccattcttatccccttctaaaaag
ctcaagttcaagtggatcaaggacctccacataaaaccagatacactgaa
actaatagaaaagaaagtagggaagagcctagagcacatgggcacagggg
aaatttccctgaacagagaagtaaatcttaattgagagattgcctagatc
agactggactgaagctttctctgtggagggttcccttgttaatgaagtag
agctcatatcactgtgggtggtgttcttctctgtatatatggccctaaat
agtacaagaaagctagggaagcaggatccttcagccaagcgatatgaagg
gtttgactgtggtttctgtttcagttatatgtgtgtggtggtatattgtg
tgtggagagtggtgagtggcacgacagtgactcgctatttttatattatg
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_8065670_8066805
seq2: B6Ng01-055A16.b_48_1167

seq1  GAATTCTTTGTATCCTGATTCTATTCTTGATTCTTCTTCTTGGAGTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTATCCTGATTCTATTCTTGATTCTTCTTCTTGGAGTAAAA  50

seq1  TTTTCCACTGTTTTTCAGTGACTTGTATTGAATTACTTCATGTCATCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCACTGTTTTTCAGTGACTTGTATTGAATTACTTCATGTCATCTTT  100

seq1  AAATGTAAAACAAAACAAAACAAACAAAACAACATGACATCTTCAGTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAAAACAAAACAAAACAAACAAAACAACATGACATCTTCAGTCCT  150

seq1  TAAACTCTTAGAAACTTCTTCTGCTTTGAGCTCTTTTAGCTTTCTCCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCTTAGAAACTTCTTCTGCTTTGAGCTCTTTTAGCTTTCTCCAAT  200

seq1  AATAGAGTGTCTATTTTATCATTCCTTCCAGAAGCTACTATTAATCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGTGTCTATTTTATCATTCCTTCCAGAAGCTACTATTAATCTTTC  250

seq1  CATTGATTCAATGGCCATGAAATTTTCCTCTATTTTCATCACAGTAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATTCAATGGCCATGAAATTTTCCTCTATTTTCATCACAGTAGATG  300

seq1  GTTGTGTTTCATTGAGGATGCAGGACTGTCAGGCTTCTAACATTCTTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTTTCATTGAGGATGCAGGACTGTCAGGCTTCTAACATTCTTCAA  350

seq1  AGAATTTTCTCCATTCCTTGTAGCCTGCATCATCAAGCAAAATTTCAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTTCTCCATTCCTTGTAGCCTGCATCATCAAGCAAAATTTCAGTT  400

seq1  GGATTCAATTGGATGCACTCACTTTCAGTGCTTAGTAAAGTCTGTAGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCAATTGGATGCACTCACTTTCAGTGCTTAGTAAAGTCTGTAGAGT  450

seq1  AAAATGATTGCCCACAGAGATAATTTCCCCTACTGTGTGTGTGTGTAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGATTGCCCACAGAGATAATTTCCCCTACTGTGTGTGTGTGTAACT  500

seq1  TTTAGGTGTTTGACAATTTCATGACAGTCTTTATCAATTCCTTATCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGTGTTTGACAATTTCATGACAGTCTTTATCAATTCCTTATCAAAA  550

seq1  TGATGTAGCTAAATTTTCTCACCAGACTACATGGTAGCTGAATTTTTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTAGCTAAATTTTCTCACCAGACTACATGGTAGCTGAATTTTTCAC  600

seq1  TTGTGTTCTATTAGAGATGAATTGGTCTCCACATTCCATTTCAACTTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTCTATTAGAGATGAATTGGTCTCCACATTCCATTTCAACTTATG  650

seq1  GACATTTTATTTTCTTGAGGTTTTATTGCAGTTATTACCTGGTGACTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTTATTTTCTTGAGGTTTTATTGCAGTTATTACCTGGTGACTCAT  700

seq1  AGTCTTTCGTTATTGCTAGAAAATTCACTCTTGGTATATGGGGAGAGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTCGTTATTGCTAGAAAATTCACTCTTGGTATATGGGGAGAGCTG  750

seq1  TCCTTTCTACCTTTCCACATTCTAGGAAAGGTCAATAAATATGTTCTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTACCTTTCCACATTCTAGGAAAGGTCAATAAATATGTTCTAAT  800

seq1  ATTGTGTCTAAGCACTACTTTGTTACAGTCAGAAAATTTGCCTGTAAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTCTAAGCACTACTTTGTTACAGTCAGAAAATTTGCCTGTAAATA  850

seq1  AAGCCATGAAAATTTATAAGAGCCATGCCTGTAGCTTAGGGAACTTTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATGAAAATTTATAAGAGCCATGCCTGTAGCTTAGGGAACTTTTCA  900

seq1  GGATCTGTTCAGATGTCTGTTGATGCTTTTAAGTCTGTGCTATTCTGTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTGTTCAGATGTCTGTTGATGCTTTTAAGTCTGTGCTATTCTGTCA  950

seq1  GAAATAAAGTCTATCATGTCACACAAATTATTTGGAAAATTATAAGATAC  1000
      ||||| ||||||||||||||||||||||||||||||||||||| ||||| 
seq2  GAAAT-AAGTCTATCATGTCACACAAATTATTTGGAAAATTAT-AGATA-  997

seq1  CCCCAAATGCTACTATTATCCAATAATTTGATTGTGATGAAATCTCAAAT  1050
      ||||||||||||||| ||||| ||||||||| ||||||| ||||||||||
seq2  CCCCAAATGCTACTA-TATCC-ATAATTTGA-TGTGATG-AATCTCAAAT  1043

seq1  AAGTTAGAGTATTATAGCTGTTTTGGGGGTTTGTATATTTCCCTAACCAG  1100
      ||| |||||||||||||||||||  |||| |||||||||| ||| |||||
seq2  AAG-TAGAGTATTATAGCTGTTT--GGGGGTTGTATATTT-CCTTACCAG  1089

seq1  GTGGGAAATCTCTTCTGCAACTTAAAAAATGTTTCC  1136
         |||||||||||||||||||   |||||||||||
seq2  --TGGAAATCTCTTCTGCAACT---AAAATGTTTCC  1120