BAC Information

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BAC

Clone NameB6Ng01-055F06
Chromosome2 (Build37)
Map Location 167,479,411 - 167,590,543
singlet/doubletdoublet
Overlap geneAI840826, Cebpb
Upstream geneBC067047, Trp53rk, Arfgef2, LOC670802, Cse1l, Stau1, LOC383774, Ddx27, AI481105, 1500012F01Rik, LOC668950, Kcnb1, Ptgis, LOC668951, B4galt5, Slc9a8, Spata2, Zfp313, Snai1, Ube2v1
Downstream geneLOC100043728, Ptpn1, 2310033K02Rik, Pard6b, Adnp, Dpm1, Mocs3, LOC100043908, Kcng1, LOC668952, Nfatc2, Atp9a, Sall4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055F06.bB6Ng01-055F06.g
ACCDH877808DH877809
length1,101781
definitionDH877808|Mus musculus domesticus DNA, BAC clone: B6Ng01-055F06, 5' end.DH877809|Mus musculus domesticus DNA, BAC clone: B6Ng01-055F06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(167,589,433 - 167,590,543)(167,479,411 - 167,480,192)
sequence
gaattctggtctcaccatgctgagttcaggccccacactgccctccccca
gcctcacccccattcctaaccaaccttctcagggcagtttgttggagttg
gggaaactggggggaaggcaatttgtgaaggaaacaggattgggtccagg
ggtgtccttccacagtaacagtagctcggcacctactgtctacggcctct
gtgaacgtgtggcttcaatgtgcagccaccttcatggcctccatctgttt
aagatacctactaagtgccgggcactgtgcttaaaagccccagtagaggt
cagtgacaccagataggcaccatttttgaccccattctcaggtgacaatc
tgagaaagagaaaccgttgctctatttggggacagagcaggctccagagc
taacgggtttggacagtcaaagctttgcttccctgtgcctgctctgtgac
ccccacaccagtgtctccgctttccacagcctcagtttaccacccaataa
atggaatgggtatagcgttcacatcatggagacccagcctaggtggggtc
agagttcaaatcctgatgtgtgcagttcctggctgtgtaatcctggatat
ggtggcttgatgtctctattctctgtatcctattgtgcaacagacaagaa
gagggagtgagctggccccctccctgagccttccctgtgggaccaggtct
tctgaaggccctgcactcatatttgacctaagatggacctgctggatggg
gtcaaagagcccacaatggaccgcaataagaagcgtgggtcagccatgcc
tgctcctgcaggctccggtgtgcaaccagcagcagccacggctgtggcat
cctcctcccaacaagtcccctcaatgcatgggtggacacatgtccccttt
ctctgcttaaacatgtctggtcaccatctgccatccatgcaccctgctca
cagcctggccaggccatgtggccttgtcttcagcctcagaagccgacatt
gcctgccatgtgcaacagctcagcctgaaacaacacttctgacttgtcta
ttccaccatcccgagcttcttcctcaggaagccaccggatgctccccaga
a
gaattcctagcacctgccatgtatcagggctcatgcccaaggctagagat
acagcagtggatggaacaggggaaaaaaatctgacttctgagttgttgga
gactcagtgggctccagcgacagtgtgtgtggcagggcttggtcaccatg
tggccctggctggcccagagatcacagatcttcttctgcctcccaagtac
tgagattaaaggcttgtacccaccaaactccacagggctgtctctgaggg
cccatcacggaggacctacttaagcaggtggctgtcagtagatcttgggg
atcaaaagcatggagtcctgagaagggctacaggtacagtgaacggttcg
tacagaggtccccaaaggaaggggtgtgcatgcgccgagagtgtggtcag
tgtggccgaacagcaacaaggagggaatgttgaagttgggggctgtcaga
tggaatggctgccaggtcagcactggacagggcagtgggtggggggaggc
tggagaacagctgggggaggtagctgattttcagtacgccaaaaagaaga
atggaaccaacaggaactgggggtgatgtcaccatgccactcaactgaat
gctccaagatgagcaggtgctgacgcgagaccaccccgagcactcatgtg
ctcgactgcacaaaggcacacgacctcgagaggggccctgtactctccga
cacccaggatcacgaggggtgtgtgctcccatcgggccacaacaggaggt
gaaccaattgagggcgatgatacttgaaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_167589433_167590543
seq2: B6Ng01-055F06.b_47_1147 (reverse)

seq1  TTCTGTGGGAGCATCTGGGTGGGCTTCCTGGAGGAGGAAGCTCGGGATGT  50
      ||||| ||||||||| ||   |||||||| ||||| ||||||||||||| 
seq2  TTCTG-GGGAGCATCCGG--TGGCTTCCT-GAGGAAGAAGCTCGGGATG-  45

seq1  GTGGAATACAGACCAGTCAGAGGTGCTGGTTCCAGGCTGAGCTGTTGCAC  100
      |||||||  |||| ||||||| ||| | ||| ||||||||||||||||||
seq2  GTGGAAT--AGACAAGTCAGAAGTG-TTGTTTCAGGCTGAGCTGTTGCAC  92

seq1  ATGGCAGGCAATGTCGGCTCCTGAGGCTGAAGACAAGGCCCACATGGGCC  150
      ||||||||||||||||||| |||||||||||||||||| |||||| ||||
seq2  ATGGCAGGCAATGTCGGCTTCTGAGGCTGAAGACAAGG-CCACAT-GGCC  140

seq1  TGGCCAGGCTGTGGAGCAGGGTGCATGGATGGCAGATGGTGACCAGACAT  200
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGGCTGT-GAGCAGGGTGCATGGATGGCAGATGGTGACCAGACAT  189

seq1  GTTTAAGCAGAG-AAGGGGACATGGTGTCCA-CCATGCATTGAGGGGACT  248
      |||||||||||| |||||||||| ||||||| ||||||||||||||||||
seq2  GTTTAAGCAGAGAAAGGGGACAT-GTGTCCACCCATGCATTGAGGGGACT  238

seq1  TGGTTGGGAGGAGGATGCCACAGCCGTGGCTGCTGCTGGTTGCACACCGG  298
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-GTTGGGAGGAGGATGCCACAGCCGTGGCTGCTGCTGGTTGCACACCGG  287

seq1  AGCCTGCAGGAGCAGGCATGGCTGA-CCACGCTTCTTATTGCGGTCCATT  347
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGCCTGCAGGAGCAGGCATGGCTGACCCACGCTTCTTATTGCGGTCCATT  337

seq1  GTGGGCTCTTTGACCCCATCCAGCAGGTCCATCTTAGGTCAAATATGAGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCTCTTTGACCCCATCCAGCAGGTCCATCTTAGGTCAAATATGAGT  387

seq1  GCAGGGCCTTCAGAAGACCTGGTCCCACAGGGAAGGCTCAGGGAGGGGGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGCCTTCAGAAGACCTGGTCCCACAGGGAAGGCTCAGGGAGGGGGC  437

seq1  CAGCTCACTCCCTCTTCTTGTCTGTTGCACAATAGGATACAGAGAATAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCACTCCCTCTTCTTGTCTGTTGCACAATAGGATACAGAGAATAGA  487

seq1  GACATCAAGCCACCATATCCAGGATTACACAGCCAGGAACTGCACACATC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCAAGCCACCATATCCAGGATTACACAGCCAGGAACTGCACACATC  537

seq1  AGGATTTGAACTCTGACCCCACCTAGGCTGGGTCTCCATGATGTGAACGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTGAACTCTGACCCCACCTAGGCTGGGTCTCCATGATGTGAACGC  587

seq1  TATACCCATTCCATTTATTGGGTGGTAAACTGAGGCTGTGGAAAGCGGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCCATTCCATTTATTGGGTGGTAAACTGAGGCTGTGGAAAGCGGAG  637

seq1  ACACTGGTGTGGGGGTCACAGAGCAGGCACAGGGAAGCAAAGCTTTGACT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGTGTGGGGGTCACAGAGCAGGCACAGGGAAGCAAAGCTTTGACT  687

seq1  GTCCAAACCCGTTAGCTCTGGAGCCTGCTCTGTCCCCAAATAGAGCAACG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAACCCGTTAGCTCTGGAGCCTGCTCTGTCCCCAAATAGAGCAACG  737

seq1  GTTTCTCTTTCTCAGATTGTCACCTGAGAATGGGGTCAAAAATGGTGCCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTTTCTCAGATTGTCACCTGAGAATGGGGTCAAAAATGGTGCCT  787

seq1  ATCTGGTGTCACTGACCTCTACTGGGGCTTTTAAGCACAGTGCCCGGCAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGTGTCACTGACCTCTACTGGGGCTTTTAAGCACAGTGCCCGGCAC  837

seq1  TTAGTAGGTATCTTAAACAGATGGAGGCCATGAAGGTGGCTGCACATTGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAGGTATCTTAAACAGATGGAGGCCATGAAGGTGGCTGCACATTGA  887

seq1  AGCCACACGTTCACAGAGGCCGTAGACAGTAGGTGCCGAGCTACTGTTAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACACGTTCACAGAGGCCGTAGACAGTAGGTGCCGAGCTACTGTTAC  937

seq1  TGTGGAAGGACACCCCTGGACCCAATCCTGTTTCCTTCACAAATTGCCTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAGGACACCCCTGGACCCAATCCTGTTTCCTTCACAAATTGCCTT  987

seq1  CCCCCCAGTTTCCCCAACTCCAACAAACTGCCCTGAGAAGGTTGGTTAGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCAGTTTCCCCAACTCCAACAAACTGCCCTGAGAAGGTTGGTTAGG  1037

seq1  AATGGGGGTGAGGCTGGGGGAGGGCAGTGTGGGGCCTGAACTCAGCATGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGGTGAGGCTGGGGGAGGGCAGTGTGGGGCCTGAACTCAGCATGG  1087

seq1  TGAGACCAGAATTC  1111
      ||||||||||||||
seq2  TGAGACCAGAATTC  1101

seq1: chr2_167479411_167480192
seq2: B6Ng01-055F06.g_68_848

seq1  GAATTCCTAGCACCTGCCATGTATCAGGGCTCATGCCCAAGGCTAGAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGCACCTGCCATGTATCAGGGCTCATGCCCAAGGCTAGAGAT  50

seq1  ACAGCAGTGGATGGAACAGGGGAAAAAAATCTGACTTCTGAGTTGTTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGTGGATGGAACAGGGGAAAAAAATCTGACTTCTGAGTTGTTGGA  100

seq1  GACTCAGTGGGCTCCAGCGACAGTGTGTGTGGCAGGGCTTGGTCACCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGTGGGCTCCAGCGACAGTGTGTGTGGCAGGGCTTGGTCACCATG  150

seq1  TGGCCCTGGCTGGCCCAGAGATCACAGATCTTCTTCTGCCTCCCAAGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTGGCTGGCCCAGAGATCACAGATCTTCTTCTGCCTCCCAAGTAC  200

seq1  TGAGATTAAAGGCTTGTACCCACCAAACTCCACAGGGCTGTCTCTGAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTAAAGGCTTGTACCCACCAAACTCCACAGGGCTGTCTCTGAGGG  250

seq1  CCCATCACGGAGGACCTACTTAAGCAGGTGGCTGTCAGTAGATCTTGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCACGGAGGACCTACTTAAGCAGGTGGCTGTCAGTAGATCTTGGGG  300

seq1  ATCAAAAGCATGGAGTCCTGAGAAGGGCTACAGGTACAGTGAACGGTTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAAGCATGGAGTCCTGAGAAGGGCTACAGGTACAGTGAACGGTTCG  350

seq1  TACAGAGGTCCCCAAAGGAAGGGGTGTGCATGCGCCGAGAGTGTGGTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGGTCCCCAAAGGAAGGGGTGTGCATGCGCCGAGAGTGTGGTCAG  400

seq1  TGTGGCCGAACAGCAACAAGGAGGGAATGTTGAAGTTGGGGGCTGTCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCGAACAGCAACAAGGAGGGAATGTTGAAGTTGGGGGCTGTCAGA  450

seq1  TGGAATGGCTGCCAGGTCAGCACTGGACAGGGCAGTGGGTGGGGGGAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGGCTGCCAGGTCAGCACTGGACAGGGCAGTGGGTGGGGGGAGGC  500

seq1  TGGAGAACAGCTGGGGGAGGTAGCTGATTTTCAGTACGCCAAAAAGAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAACAGCTGGGGGAGGTAGCTGATTTTCAGTACGCCAAAAAGAAGA  550

seq1  ATGGAACCAACAGGAACTGGGGGTGATGTCACCATGCCACTCAACTGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACCAACAGGAACTGGGGGTGATGTCACCATGCCACTCAACTGAAT  600

seq1  GCTCCAAGATGAGCAGGTGCTGACGCGAGACCACCCCGAGCACTCATGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAAGATGAGCAGGTGCTGACGCGAGACCACCCCGAGCACTCATGTG  650

seq1  CTCGACTGCACAAAGGCACACGACCTCGAGAGGGGCCCTGTACTCACCGA  700
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTCGACTGCACAAAGGCACACGACCTCGAGAGGGGCCCTGTACTCTCCGA  700

seq1  CACCCAGGATCACGAGGGGTGTGTGCTCCCAGCGGGCCAGCAGCAGGAGG  750
      ||||||||||||||||||||||||||||||| ||||||| || |||||||
seq2  CACCCAGGATCACGAGGGGTGTGTGCTCCCATCGGGCCA-CAACAGGAGG  749

seq1  TGGACCAAGTTGTGGGCGATGAGAC-TGAAACA  782
      || ||||| ||| ||||||||| || |||||||
seq2  TGAACCAA-TTGAGGGCGATGATACTTGAAACA  781