BAC Information

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BAC

Clone NameB6Ng01-055P08
Chromosome2 (Build37)
Map Location 86,416,004 - 86,416,655
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1
Downstream geneOlfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055P08.bB6Ng01-055P08.g
ACCDH878264DH878265
length6521,027
definitionDH878264|Mus musculus domesticus DNA, BAC clone: B6Ng01-055P08, 5' end.DH878265|Mus musculus domesticus DNA, BAC clone: B6Ng01-055P08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagggtcagacacttcctcgaggcaagatctcctttagtggaga
aggtgcacagagggctgagtttcagcccattcctcctgggtgcagatgta
ggcctgtacaaccttgtctcagaagctctgcctcttctgaggactgtgat
ttcctgagtggacctgccttagagagttagcagagagaaaattttgaaat
gtttttttcttcaacatatactttagcatgtgagacatgcactagacatg
gtcagttacagaagttgaatgtatggaaaaagtcaagaagagtccctgga
tagacccagaaaagaatgtgggagatctgaatggtgggagaagttacaaa
tcacaaggaagatacctgtggctttatcctgcacaacaagccctgttgga
tatcagtaagctggttgaaggagatgcagtggtttgaccgactaggcagc
aaaattggaagaagtgcttgagatgtatcctgtaaactgaatagaaagcc
tagatgacaagattaatggagattcattagactagactttgcagaactct
agtccactgcctgggtgactaaagatatctgatttccaaactcctttaaa
atagtctctctctctctctctctctctctctctctctctctctctctctc
tc
gaattcagtaggaattcagtaagaaggttacctattcagtaactaattaa
gcattacaaaggaaggagccagagcagctcagggctggtctgcagagggt
ttacttgggacagcagccagtctcatcaaaataaaggaatacacaattgg
cctagctaataggtgggttaaccatgaaagagctagggaattccaatgag
atagaaacattcagtacaggctacattgcatattagaagcaagttggtga
attcttctgtcaaatggagattctccacagatacttaaaagttatactca
tacaagaatttgtcagggcctaggaaatagggaggttgtgatattgcgtt
attcatgagaaggtctgctagagcagaaccccctggtgctagctttcaca
aggctcaaaggagtagcactaattgtgactagggtgtaaaatccttacat
gtcattaagctgaccctaggctttatctttactgtaaacatttacctggt
tcctataagtccttttgaagtcattcctttgttttgtgtcaggtaacttc
gatgtactttgcctgctgtgacatcctactccctttattttctgtagtat
atatactttatgacaatacattcagattctacacaatcttctttgtgcat
ctgtctgtcattcgctgactccttgcctatctctacccagagactcgtcc
tacccagacaagggacccaagagggtctgtggcactagcacccaaccaat
agactagagacccctaaattagctaaaaggctggaagaagctgaggagta
ggttggccccatgggaaaagcagcagtctcaactgacctggacccctgaa
acctctcagacactgagctacaaaccaggcaggatacaccagttgatata
atgtccctgacacatgtggagagagtactgcatggtctagcctcagcaag
agaaaatgcacccacccttcatagacttgaggcccaaggagtgagatgcc
tgttaagggttgggttgggaaagtagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86416004_86416655
seq2: B6Ng01-055P08.b_47_698 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACT  50

seq1  ATTTTAAAGGAGTTTGGAAATCAGATATCTTTAGTCACCCAGGCAGTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAGGAGTTTGGAAATCAGATATCTTTAGTCACCCAGGCAGTGGA  100

seq1  CTAGAGTTCTGCAAAGTCTAGTCTAATGAATCTCCATTAATCTTGTCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTTCTGCAAAGTCTAGTCTAATGAATCTCCATTAATCTTGTCATC  150

seq1  TAGGCTTTCTATTCAGTTTACAGGATACATCTCAAGCACTTCTTCCAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTTTCTATTCAGTTTACAGGATACATCTCAAGCACTTCTTCCAATT  200

seq1  TTGCTGCCTAGTCGGTCAAACCACTGCATCTCCTTCAACCAGCTTACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCCTAGTCGGTCAAACCACTGCATCTCCTTCAACCAGCTTACTGA  250

seq1  TATCCAACAGGGCTTGTTGTGCAGGATAAAGCCACAGGTATCTTCCTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAACAGGGCTTGTTGTGCAGGATAAAGCCACAGGTATCTTCCTTGT  300

seq1  GATTTGTAACTTCTCCCACCATTCAGATCTCCCACATTCTTTTCTGGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTAACTTCTCCCACCATTCAGATCTCCCACATTCTTTTCTGGGTC  350

seq1  TATCCAGGGACTCTTCTTGACTTTTTCCATACATTCAACTTCTGTAACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGGGACTCTTCTTGACTTTTTCCATACATTCAACTTCTGTAACTG  400

seq1  ACCATGTCTAGTGCATGTCTCACATGCTAAAGTATATGTTGAAGAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTCTAGTGCATGTCTCACATGCTAAAGTATATGTTGAAGAAAAAA  450

seq1  ACATTTCAAAATTTTCTCTCTGCTAACTCTCTAAGGCAGGTCCACTCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCAAAATTTTCTCTCTGCTAACTCTCTAAGGCAGGTCCACTCAGG  500

seq1  AAATCACAGTCCTCAGAAGAGGCAGAGCTTCTGAGACAAGGTTGTACAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACAGTCCTCAGAAGAGGCAGAGCTTCTGAGACAAGGTTGTACAGG  550

seq1  CCTACATCTGCACCCAGGAGGAATGGGCTGAAACTCAGCCCTCTGTGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATCTGCACCCAGGAGGAATGGGCTGAAACTCAGCCCTCTGTGCAC  600

seq1  CTTCTCCACTAAAGGAGATCTTGCCTCGAGGAAGTGTCTGACCCTGGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCACTAAAGGAGATCTTGCCTCGAGGAAGTGTCTGACCCTGGAAT  650

seq1  TC  652
      ||
seq2  TC  652