BAC Information

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BAC

Clone NameB6Ng01-057B14
Chromosome2 (Build37)
Map Location 34,406,275 - 34,605,814
singlet/doubletdoublet
Overlap geneMapkap1, LOC623448, LOC623269, Gapvd1
Upstream geneLmx1b, LOC100041918, 2610528K11Rik, LOC100041931, Pbx3, LOC665948
Downstream geneHspa5, Rabepk, Fbxw2, EG623370, Psmd5, D730039F16Rik, Phf19, Traf1, Hc, AI182371, Rab14, Gsn, Stom, LOC654354, 4930568D16Rik, 4930402F06Rik, Ggta1, LOC666042, LOC100042194, Dab2ip
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057B14.bB6Ng01-057B14.g
ACCDH879069DH879070
length8661,118
definitionDH879069|Mus musculus domesticus DNA, BAC clone: B6Ng01-057B14, 5' end.DH879070|Mus musculus domesticus DNA, BAC clone: B6Ng01-057B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,604,954 - 34,605,814)(34,406,275 - 34,407,410)
sequence
gaattcctctccttttccttccttcctgtttgtttttgtttttttgagac
agggtttctttgtgtagccctggctgtcctggaactcatgcctgcctctg
cctcctgagtactggtatcaaaggcctgtagcatcactgcccagcatttt
ctttttctttttttttcttttcctaaaggctaaagcaggactgatgatgt
agcttgatggtagagcagttgcacttagaaggcagagactggatcttttt
tgagttcaaggccagtctgatcttcataatgaggtctaggctagacagaa
ctataaagtaagactctgtcaaaaaaaaaaaaaaaaagaatagaacacag
caaaaagtaaaaaagacttccttgttttgttagctgtttttatttccttg
tttatgttgcagtgttagggatcagactccagccatagcacccagcagcc
agtcacatttacagcacaaagacaaatgaatcatttggttgtcaaatgcc
attttcttgcttttttattttccttatgattttcaccaaggtgctgggag
ttgaaccccaggccttcttccgcggccctcagagtaccactcaagttgga
tttgtcccagagttcttttcagtcagattcagacgaaacagttttagctg
gcatactaaactggtttttaaagtctcattgtgcgccataagaaacaccc
agtgatgtcagttttactaatgacatatttttgattaaggagtctcacaa
gtcttttcttgtaaaggcattattttttcctttttaataaataatctatg
ggaataataatattttgctttcttcaaagtcatcttttcgatgtgtgtgt
gtggggggggtatgca
gaattcacacctgagcagtaaaggttgcccaatttagtgggaagtactgt
agccagagcccacagggctattgggaagagctgcacagggtttcagccat
tcaggaactacttaggatgcagactgcctggcttaaagcagcctccactt
ggtacatgtttgttggaagaaagatgggacagacagaaaggagccctgct
gtcaggtggggctgatgttttaaagaaatctgtagggagggtagtatatt
ctggcactagaaccaagaaagcagataatgtttcgcatccagggatagtg
cacagagaaccacatgataatacagagctgagccacagaagcaagcagta
agcaaaagtctcatcagaatcacctcctaaaaatacctttaaaaatgatt
cttggggacctacatagtataataacttttctcatgaaatttcatacagt
taacttttttattctcatattagaacagatgaaagctaggaatgagtaat
tataaatagtgaaatcaaacttagccagaaagatgctcagagtataaaat
gagctggaaagctgaaacaccaccatctgcccagttagctcattcagtca
ttcatcacacattgaccagcttgcatcatctcaaagacaaataagccagt
catttgttgagctgttgagaatgatggcaagtggagttccacacatttat
ttacattgttttcctggtcaggtcattccttctcttgtcctccattcttt
ttttttttttttgggcttttcgagacagggtttctctgtgtagccctggc
tgtcctgggaattacttttgtagaccaggctggcctcgaactcagaaatc
cgcttgcctctgcctcccaagtgctgggattaaaggcgtgcgccaccacg
cccggaacttgtcttcattttactagcaagtacattgaagttccataatt
gtagatttatgcacaggaaatccatgcattacacaggacagcgaggattc
ctaatagcctcttgaatctagctgggatctgagcaggaactgggccctga
ggaagggcattactttatgacattaaagccaacagggtttaaaatgaagc
ttgcttttggctccctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_34604954_34605814
seq2: B6Ng01-057B14.b_44_909 (reverse)

seq1  TGCATACCCCCCCCACACACACACATCG-AAAGATGACTTTG-AGAAAGC  48
      |||||||||||||||||||||||||||| ||||||||||||| |||||||
seq2  TGCATACCCCCCCCACACACACACATCGAAAAGATGACTTTGAAGAAAGC  50

seq1  AAAATATTATTATT-CCATAGATTATTTATTAAAAAGG-AAAAATAATGC  96
      |||||||||||||| ||||||||||||||||||||||| |||||||||||
seq2  AAAATATTATTATTCCCATAGATTATTTATTAAAAAGGAAAAAATAATGC  100

seq1  CTTTACAAGAAAAGACTTGTGAGACTCCTTAATCAAAAATATGTCATTAG  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACAAGAAAAGACTTGTGAGACTCCTTAATCAAAAATATGTCATTAG  150

seq1  TAAAACTGACATCACTGGGTGTTTCTTATGGCGCACAATGAGACTTT-AA  195
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TAAAACTGACATCACTGGGTGTTTCTTATGGCGCACAATGAGACTTTAAA  200

seq1  AACCAGTTTAGTATGCCAGCTAAAACTGTTTCGTCTGAATCTGACTGAAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGTTTAGTATGCCAGCTAAAACTGTTTCGTCTGAATCTGACTGAAA  250

seq1  AGAACTCTGGGACAAATCCAACTTGAGTGGTACTCTGAGGGCCGCGGAAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCTGGGACAAATCCAACTTGAGTGGTACTCTGAGGGCCGCGGAAG  300

seq1  AAGGCCTGGGGTTCAACTCCCAGCACCTTGGTGAAAATCATAAGGAAAAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTGGGGTTCAACTCCCAGCACCTTGGTGAAAATCATAAGGAAAAT  350

seq1  AAAAAAGCAAGAAAATGGCATTTGACAACCAAATGATTCATTTGTCTTTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGCAAGAAAATGGCATTTGACAACCAAATGATTCATTTGTCTTTG  400

seq1  TGCTGTAAATGTGACTGGCTGCTGGGTGCTATGGCTGGAGTCTGATCCCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTAAATGTGACTGGCTGCTGGGTGCTATGGCTGGAGTCTGATCCCT  450

seq1  AACACTGCAACATAAACAAGGAAATAAAAACAGCTAACAAAACAAGGAAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGCAACATAAACAAGGAAATAAAAACAGCTAACAAAACAAGGAAG  500

seq1  TCTTTTTTACTTTTTGCTGTGTTCTATTCTTTTTTTTTTTTTTTTTGACA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTACTTTTTGCTGTGTTCTATTCTTTTTTTTTTTTTTTTTGACA  550

seq1  GAGTCTTACTTTATAGTTCTGTCTAGCCTAGACCTCATTATGAAGATCAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTACTTTATAGTTCTGTCTAGCCTAGACCTCATTATGAAGATCAG  600

seq1  ACTGGCCTTGAACTCAAAAAAGATCCAGTCTCTGCCTTCTAAGTGCAACT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCTTGAACTCAAAAAAGATCCAGTCTCTGCCTTCTAAGTGCAACT  650

seq1  GCTCTACCATCAAGCTACATCATCAGTCCTGCTTTAGCCTTTAGGAAAAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTACCATCAAGCTACATCATCAGTCCTGCTTTAGCCTTTAGGAAAAG  700

seq1  AAAAAAAAAGAAAAAGAAAATGCTGGGCAGTGATGCTACAGGCCTTTGAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGAAAAAGAAAATGCTGGGCAGTGATGCTACAGGCCTTTGAT  750

seq1  ACCAGTACTCAGGAGGCAGAGGCAGGCATGAGTTCCAGGACAGCCAGGGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTACTCAGGAGGCAGAGGCAGGCATGAGTTCCAGGACAGCCAGGGC  800

seq1  TACACAAAGAAACCCTGTCTCAAAAAAACAAAAACAAACAGGAAGGAAGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAAGAAACCCTGTCTCAAAAAAACAAAAACAAACAGGAAGGAAGG  850

seq1  AAAAGGAGAGGAATTC  861
      ||||||||||||||||
seq2  AAAAGGAGAGGAATTC  866

seq1: chr2_34406275_34407410
seq2: B6Ng01-057B14.g_69_1186

seq1  GAATTCACACCTGAGCAGTAAAGGTTGCCCAATTTAGTGGGAAGTACTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACCTGAGCAGTAAAGGTTGCCCAATTTAGTGGGAAGTACTGT  50

seq1  AGCCAGAGCCCACAGGGCTATTGGGAAGAGCTGCACAGGGTTTCAGCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAGCCCACAGGGCTATTGGGAAGAGCTGCACAGGGTTTCAGCCAT  100

seq1  TCAGGAACTACTTAGGATGCAGACTGCCTGGCTTAAAGCAGCCTCCACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAACTACTTAGGATGCAGACTGCCTGGCTTAAAGCAGCCTCCACTT  150

seq1  GGTACATGTTTGTTGGAAGAAAGATGGGACAGACAGAAAGGAGCCCTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACATGTTTGTTGGAAGAAAGATGGGACAGACAGAAAGGAGCCCTGCT  200

seq1  GTCAGGTGGGGCTGATGTTTTAAAGAAATCTGTAGGGAGGGTAGTATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGTGGGGCTGATGTTTTAAAGAAATCTGTAGGGAGGGTAGTATATT  250

seq1  CTGGCACTAGAACCAAGAAAGCAGATAATGTTTCGCATCCAGGGATAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACTAGAACCAAGAAAGCAGATAATGTTTCGCATCCAGGGATAGTG  300

seq1  CACAGAGAACCACATGATAATACAGAGCTGAGCCACAGAAGCAAGCAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGAACCACATGATAATACAGAGCTGAGCCACAGAAGCAAGCAGTA  350

seq1  AGCAAAAGTCTCATCAGAATCACCTCCTAAAAATACCTTTAAAAATGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAGTCTCATCAGAATCACCTCCTAAAAATACCTTTAAAAATGATT  400

seq1  CTTGGGGACCTACATAGTATAATAACTTTTCTCATGAAATTTCATACAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGGACCTACATAGTATAATAACTTTTCTCATGAAATTTCATACAGT  450

seq1  TAACTTTTTTATTCTCATATTAGAACAGATGAAAGCTAGGAATGAGTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTTTTATTCTCATATTAGAACAGATGAAAGCTAGGAATGAGTAAT  500

seq1  TATAAATAGTGAAATCAAACTTAGCCAGAAAGATGCTCAGAGTATAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATAGTGAAATCAAACTTAGCCAGAAAGATGCTCAGAGTATAAAAT  550

seq1  GAGCTGGAAAGCTGAAACACCACCATCTGCCCAGTTAGCTCATTCAGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGAAAGCTGAAACACCACCATCTGCCCAGTTAGCTCATTCAGTCA  600

seq1  TTCATCACACATTGACCAGCTTGCATCATCTCAAAGACAAATAAGCCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCACACATTGACCAGCTTGCATCATCTCAAAGACAAATAAGCCAGT  650

seq1  CATTTGTTGAGCTGTTGAGAATGATGGCAAGTGGAGTTCCACACA-TTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CATTTGTTGAGCTGTTGAGAATGATGGCAAGTGGAGTTCCACACATTTAT  700

seq1  TTACATTGTTTTCCTGGTCAGGTCATTCCTTCTCTTGTCCTCCATTCTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTGTTTTCCTGGTCAGGTCATTCCTTCTCTTGTCCTCCATTCTTT  750

seq1  TTTTTTTTTTTT-GGCTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGC  798
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTGGGCTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGC  800

seq1  TGTCCTGGAACTCAC-TTTGTAGACCAGGCTGGCCTCGAACTCAGAAATC  847
      |||||||| | | || ||||||||||||||||||||||||||||||||||
seq2  TGTCCTGGGAATTACTTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATC  850

seq1  CGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCACG  897
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCACG  900

seq1  CCCGGTACTTGTCCTCCATTCTTAACTAGCAAGTACAGTTGAGTTCCCAT  947
      ||||| |||||| || |||  || ||||||||||||| ||||  | ||||
seq2  CCCGGAACTTGT-CTTCAT--TTTACTAGCAAGTACA-TTGAAGTTCCAT  946

seq1  AAATGTAGAATTTATGCACAAGGAGATCCAGGCATATACACAGGACAGCG  997
      || ||||| |||||||||| |||| ||||| |||| ||||||||||||||
seq2  AATTGTAG-ATTTATGCAC-AGGAAATCCATGCAT-TACACAGGACAGCG  993

seq1  AAGGATTTCAGATAAGCTCACTGAGATCATGCTGGGAACTGAGCAGGGCA  1047
       |||||| |  |||  |||  ||| |||  ||||||| |||||||||  |
seq2  -AGGATTCCTAATAGCCTC-TTGA-ATCTAGCTGGGATCTGAGCAGG--A  1038

seq1  CCTGGCCCCTGAGGCAAGGGCCATTACCTTAGTGACATGCAGAGGCCAAG  1097
       |||| |||||||| ||||| |||||| ||| ||||||    | ||||| 
seq2  ACTGGGCCCTGAGG-AAGGG-CATTACTTTA-TGACAT--TAAAGCCAA-  1082

seq1  TCAGGTTGTTAAAAAGGAAGCTTGCTTTTGGCCCCCTGA  1136
       ||||  ||| |||| |||||||||||||||| ||||||
seq2  -CAGG--GTTTAAAATGAAGCTTGCTTTTGGCTCCCTGA  1118