BAC Information

Click to search

BAC

Clone NameB6Ng01-058A05
Chromosome2 (Build37)
Map Location 142,776,687 - 142,777,222
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058A05.bB6Ng01-058A05.g
ACCDH879709DH879710
length1,0181,132
definitionDH879709|Mus musculus domesticus DNA, BAC clone: B6Ng01-058A05, 5' end.DH879710|Mus musculus domesticus DNA, BAC clone: B6Ng01-058A05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
taaggatttcattgcatcctcttataatggagaggacctcggaattgttt
gttcaggtgtgagccccattttttaagggggttatttgattttctgaggt
ccaccttcttgagttctttatatatgttggatattagtcccctatctgat
ttaggataggtaaagatcctttcccagtctgttggtggtctttttgtctt
atagacagtgtcttttgccttgcagaaactttggagtttcattaggtccc
atttgtcaattctcgatcttacagcacaagccattgctgttctgttcagg
aatttttcccctgtgcccatatcttcaaggcttttccccactttctcctc
tataagtttcagtgtctctggttttatgtgaagttccttgatccacttag
atttgaccttagtacaaggagataagtatggatcgattcgcattcttcta
catgataacaaccagttgtgccagcaccaattgttgaaaatgctgtcttt
cttccactggatggttttggctcccttgtcgaagatcaagtgaccatagg
tgtgtgggttcatttctgggtcttcaattctattccattggtccacttgt
ctgtctctataccagtaccatgcagtttttatcacaattgctctgtagta
aagctttaggtcaggcatggtgattccaccagaggttcttttatccttga
gaagagtttttgctatcctcggttttttgttattccagatgaatttgcaa
attgctccttctaattcgttgaagaattgagttggaattttaatggggat
tgcattgaatctgtagattgcttttggcaagatagccatttttacaatgt
tggtcctgccaatccatgagcatgggagatctttccatcttctgagatct
tctttaatttctttcttcaggacttgaagttttatcatacagatctttca
cttccttcgttagagtcacgccgagatattttatattatttgtggctatt
gagaaggtgttgtttccc
gaattcatttgactctgttctttttttaagttggaaggctttatattact
ggttcatctccttgttatgggtctgtttactttgctgaactcttggttta
agtttggtagtttgagtgaatctaaaaatccacccattccttttgtgtgt
atattaatgtctttcacattttaaaatgtgcttatctgattctgttaatt
aagtctcctctctcatttcttttcctcctccccattctcctggtccacta
cccctcttcctccaacttttcttgttgttgttaactgtggtaataaactg
ttcatcttagtttgcatttccaaaaattagatctcagattcattgattct
gtgtatttcctaaatttcatttttattaaatttttatattattttttctt
ttattaaatatttatgttattttttcttttatttctatacatcttttggg
ttggttgttcttatttttctgaattatttagttatataattaagccattt
tttgtgtttttttttctggtattttacatatatggactttaaactataca
tttctattcaagagtccttttaaatttcccagagatttgtgttgtatttt
gttttcatttttattttaaaacaggaagtatttttattttcttgatttgt
tctttggcccattcatcaattcagtaatgcatttgtttaatctccttgag
ttcatgtagttattaaagatctaatgacttcaaagcttaataatgagatt
agagaagatgtagagggtacactgtttttggtttgctggtatgttttaag
tatgtgttgaaacttattttgtgtcctattcagtgttctgtttcagagaa
agttccataggcctttgagcagatggatattctttgatatttgggtggat
atctgtatatacctgttaggttcacttcatgatgatgccattattcctat
tttctagttatttttgtgctacagttgtctatgataaaggtatggaaact
ctactgagttaagttattttacaggaagtccacgtacctttttgaaatgg
agtgccacagatttgtaaatatgttagatgatgatggtaggatatctctg
gtaaaactgtcttcttatcttcaattattatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776687_142777222
seq2: B6Ng01-058A05.b_58_593 (reverse)

seq1  GACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGG  50

seq1  TCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGACA  100
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  TCACTTGATCTTCGACAAGGGAGCCAAAACCATCCAGTGGAAGAAAGACA  100

seq1  GCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGA  150

seq1  ATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTG  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTG  200

seq1  GATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGA  250

seq1  AAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCTGAAC  300
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAAC  300

seq1  AGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCT  350

seq1  AATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAA  400
      |||||||||||||||||||||||||||||||||||| ||| |||||||||
seq2  AATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTCTATAAGACAA  400

seq1  AAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGAT  450
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAAGACCACCAACAGACTGGGAAAGGATCTTTACCTATCCTAAATCAGAT  450

seq1  AGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACCTCAG  500

seq1  AAAATCAAATAACCCCATTAAAAAATGGGGCTCACA  536
      |||||||||||||||| |||||||||||||||||||
seq2  AAAATCAAATAACCCCCTTAAAAAATGGGGCTCACA  536