BAC Information

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BAC

Clone NameB6Ng01-060B23
Chromosome2 (Build37)
Map Location 105,474,354 - 105,475,236
singlet/doubletsinglet
Overlap genePax6os1
Upstream geneCstf3, Tcp11l1, EG622282, OTTMUSG00000014964, Depdc7, Qser1, LOC100042995, 2310047K21Rik, LOC668744, Prrg4, Ccdc73, Ga17, 2210415I11Rik, LOC622356, Wt1, 0610012H03Rik, Rcn1, LOC100043391
Downstream genePax6, Elp4, LOC100043394, Immp1l, LOC100043402, Dph4, LOC668765, Dcdc5, 9330126M15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060B23.bB6Ng01-060B23.g
ACCDH881194DH881195
length9621,227
definitionDH881194|Mus musculus domesticus DNA, BAC clone: B6Ng01-060B23, 5' end.DH881195|Mus musculus domesticus DNA, BAC clone: B6Ng01-060B23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggccagccagagctacatagtgagaccctgtctcagaaaaca
aacaaaacaaacaaacaaacaaacaaacaaaaacttgttcaaaatgagtt
tccctgggacacctctttaatattgagtctaacaggaacctttcaattta
aactcccttctcctttctaccaaatatattaagtccagtggtgtggagct
gtgcccctaatgacatcttggaaccaaccagtgatgggagtcattataca
gacctcagcttttactagagatcccaaggtccacttgccacaaataccca
ctaagtcctagtgaaagagacccacacattctcctgtctccctgaaattc
tttcatttatttcaggagtatgtattaattatagtaatggattctgtctt
tggagtctcagttgtgccacatgatgtttttctggaagcttccttgtgag
aagatgtttttgctgaagcagatacatgggaggatgtttttgctgaagca
gacacatgggagaatgttttgctgagaacagacaagtggtgtttttctgg
aagcagcctggaaaagggggcatgtgatgtttgctagagcagatgcttga
gagagcatgtgatgtctggaaagggtataagtataacccaacagacagtg
aatgatgctttgtggtattggtatgccttgccattcttcgctcgtcatcc
ttgggctttgctgatgctggtcttcactgatgacacttcgttgtattgat
tcaccttgccgttctttgctgggaatcctttgtcgtgatttcatagaaag
aaatgccagcaaagaactgctggtgttccagtgacttcttgccacttcca
cgtactctggccagttggctgagcctcggggtttcttctggattggacta
ccgttgccaatttgtgaatgatgttcgtggatggagctgatggtgctgat
ttgtgtgaactg
gaattcctagagatagcctgcctctgcttcatgaatggtggcataatagg
cacataccaaaatatgcctggataagacaatatgtttttatgctacaaat
actcacctatgtatagaaggaaaatacatcaacataaaaataccatacag
gccaagctcagtggcacatacctttaatcccagcacttgggaagcagatg
agtctctgtgaattcaaggctgtcctgttctacaatgaggaaccaggact
gccagcgcgatgtagagagagcccatctcaaagacaaaacaaaatactat
ataggaaaaacacacagccagtataaccagtgaaagattgaaagcttgcc
ctacatctcaggaacaagccaaggatacttctcccttccattcaacataa
tactggaagctacagcctaaacaattgaacaaggaaaataaatacgtaaa
agtatctgtgtcaaacaaaattgcctctgctttaagtggcatgatattat
gtgttaaaccgtctagattttatctgtacatatataaccacacagacaga
aaaggtaaacttatcagcatctcaggataaaggcagacaccatacagaac
tacatatatacacatacatacatacacatttctctatagcagtacagaaa
aatcaaaaaattcaggaagcaattccagttataagaacaattagcaataa
agttaacaaaggagacaaaagaattgtccacaggaaactataaaactctg
caaaaatgaaagtgaaatagatacaaataaaaggaaatcctgtgtccata
gatttgaagatttacagttttttagccatgctcctcagtaatcctcaatc
tcaatagattactgataaaatcccagtgggaaaatggtgaagatagggct
aaaattcatcagaatggtgaaggatcttgagtaacaagaggaagaaaggc
tggggctcacaaattccctgatttaacactctattacaagatatagtaaa
gaaaaacaatgttgcacagcttcagcatgtataagacttaatgaacagaa
gaaaaggtccaggtatccacatatataatagttcaaatggtcctggacaa
tgaccaggattacagtaaggacttatgtagggtcttccaaatatatgtag
gggactggaattctgccatcaagagtgaattgccttaagaaataagcgca
atttacaagaatggacactctcactag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_105474354_105475236
seq2: B6Ng01-060B23.b_47_929

seq1  GAATTCCAGGCCAGCCAGAGCTACATAGTGAGACCCTGTCTCAGAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCCAGCCAGAGCTACATAGTGAGACCCTGTCTCAGAAAACA  50

seq1  AACAAAACAAACAAACAAACAAACAAACAAAAACTTGTTCAAAATGAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAAACAAACAAACAAACAAACAAAAACTTGTTCAAAATGAGTT  100

seq1  TCCCTGGGACACCTCTTTAATATTGAGTCTAACAGGAACCTTTCAATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGGACACCTCTTTAATATTGAGTCTAACAGGAACCTTTCAATTTA  150

seq1  AACTCCCTTCTCCTTTCTACCAAATATATTAAGTCCAGTGGTGTGGAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCCTTCTCCTTTCTACCAAATATATTAAGTCCAGTGGTGTGGAGCT  200

seq1  GTGCCCCTAATGACATCTTGGAACCAACCAGTGATGGGAGTCATTATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCCTAATGACATCTTGGAACCAACCAGTGATGGGAGTCATTATACA  250

seq1  GACCTCAGCTTTTACTAGAGATCCCAAGGTCCACTTGCCACAAATACCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCAGCTTTTACTAGAGATCCCAAGGTCCACTTGCCACAAATACCCA  300

seq1  CTAAGTCCTAGTGAAAGAGACCCACACATTCTCCTGTCTCCCTGAAATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTCCTAGTGAAAGAGACCCACACATTCTCCTGTCTCCCTGAAATTC  350

seq1  TTTCATTTATTTCAGGAGTATGTATTAATTATAGTAATGGATTCTGTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTATTTCAGGAGTATGTATTAATTATAGTAATGGATTCTGTCTT  400

seq1  TGGAGTCTCAGTTGTGCCACATGATGTTTTTCTGGAAGCTTCCTTGTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCTCAGTTGTGCCACATGATGTTTTTCTGGAAGCTTCCTTGTGAG  450

seq1  AAGATGTTTTTGCTGAAGCAGATACATGGGAGGATGTTTTTGCTGAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTTTTTGCTGAAGCAGATACATGGGAGGATGTTTTTGCTGAAGCA  500

seq1  GACACATGGGAGAATGTTTTGCTGAGAACAGACAAGTGGTGTTTTTCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATGGGAGAATGTTTTGCTGAGAACAGACAAGTGGTGTTTTTCTGG  550

seq1  AAGCAGCCTGGAAAAGGGGGCATGTGATGTTTGCTAGAGCAGATGCTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCCTGGAAAAGGGGGCATGTGATGTTTGCTAGAGCAGATGCTTGA  600

seq1  GAGAGCATGTGATGTCTGGAAAGGGTATAAGTATAACCCAACAGACAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCATGTGATGTCTGGAAAGGGTATAAGTATAACCCAACAGACAGTG  650

seq1  AATGATGCTTTGTGGTATTGGTATGCCTTGCCATTCTTCGCTCGTCATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGCTTTGTGGTATTGGTATGCCTTGCCATTCTTCGCTCGTCATCC  700

seq1  TTGGGCTTTGCTGATGCTGGTCTTCACTGATGACACTTCGTTGTATTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCTTTGCTGATGCTGGTCTTCACTGATGACACTTCGTTGTATTGAT  750

seq1  TCACCTTGCCGTTCTTTGCTGGGAATCCTTTGTCGTGATTTCATAGAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTGCCGTTCTTTGCTGGGAATCCTTTGTCGTGATTTCATAGAAAG  800

seq1  AAATGCCAGCAAAGAACTGCTGGTGTTCCAGTGACTTCTTGCCACTTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCAGCAAAGAACTGCTGGTGTTCCAGTGACTTCTTGCCACTTCCA  850

seq1  CGTACTCTGGCCAGTTGGCTGAGCCTCGGGGTT  883
      |||||||||||||||||||||||||||||||||
seq2  CGTACTCTGGCCAGTTGGCTGAGCCTCGGGGTT  883