BAC Information

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BAC

Clone NameB6Ng01-060E14
Chromosome2 (Build37)
Map Location 139,975,587 - 139,976,490
singlet/doubletsinglet
Overlap geneEsf1
Upstream geneLOC628103, C130053K05Rik, LOC100043792, 5430433G21Rik, Tasp1, LOC672103, LOC269365
Downstream gene2310003L22Rik, Sel1l2, 2900006F19Rik, Flrt3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060E14.bB6Ng01-060E14.g
ACCDH881300DH881301
length9051,264
definitionDH881300|Mus musculus domesticus DNA, BAC clone: B6Ng01-060E14, 5' end.DH881301|Mus musculus domesticus DNA, BAC clone: B6Ng01-060E14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtcatgtatcccataattcaatggataaaacatgaggaacaca
ttaacaaaatggcaatgtatttcattctattaaaagcttacttctgaaaa
cataattagaagcaagatgcttccacgttgaaactttagtggtaagtctc
tgatggcttactttaaattgattttttccagtactaaattgtactttctg
aagctctaaaatgtgggataactcatgtaggtctgcttttctaattcaag
gacattttatgaatgcttttatagtaaataagatttttttaaaaaataaa
ttcaaacaataagctattcttataaacaataatcaggaatgtttaatact
caaatatactattgtaactatcacaagcactaaattgcagatcaaggtaa
gtttgtgatctattaaaatactgaagaaaaaggcatgcttttgaaaaaat
tacatatttcaaactgagagaagcgaatctttagttttaagacaaagtac
ataatacaaagtactatcctaactacttatatacatcatttagtctttct
atgagccagttaatattataattcttacttcacagctatacaaagaaagg
accatggtgctaagaaaacttgacctttgttatttcaccatgtggtaaag
tcaagttttgaaactagtagagcttaagggtttttccttctctattttag
aatacgaaaggttaaacataggattttatgaaccttggcaaacactctac
cattgagctgtatccccagtgagtccaagatattaaatacactgaaaaat
taatgattattttatgataatgttaatgcttatttatcaatactactagg
tgtcctattgtaaacactgttttaaaatttaaatgggggtgggggggggt
gggga
gaattcacgcagttgaatccttctcaacagtctgtgttgtgggaacactt
tattaccaccgttccccagctgaagagttctgaattcacgcagttgaatc
cttctcaacagtctgttttacgggaacacttcattaccaccattccccag
ctgaagagttctgaattcacgcagttgaatccttctaaacagtctgtttt
acgggaacacttcattaccattacccgcagttctggttccggaatgaggg
atcttccttgcgccggtgatggtaaccatcccgggttttctcatcccagg
atttctcgtcctgggttttctcgtctcgggtttcagcaccaactcttaca
cgcgttctcgcgaccggccaggaagaacgcaacaaaccggaatcttctgc
gacaaaactttattgcttacatcttcaggagccagagagcaagagagcaa
gagctctattgcttacatctttaggagccaaagcgcaagagagcaagaga
gagggcaagagcgcaagagcgcaagagctttattgcttacatctttagga
gccagaagcaagagccagagcaagagctcaagagcgcaaaagagcaagag
tgcaagagagagaatggcgaaaccccgtcccctttaaggagaattattct
ccgcctaggacgtattactccctgattggctgcagcccatcggccgagtt
gtcgtcacggggaaggcagagcacatggggtggaaaactacccttggcac
atgcgcagattatttgtttaccacttagaacacaggatgtcagcgccatc
ttgcacagcgaatgtgagggcggctcccacactccatcacaaaagaagtc
acttgatatgcattctctatcagtggatatagcccagaaacttagaatac
tccaagatacaatttgcaaacacaagaaaatcaggaggaaggaagacaac
gtgtggattcttcattcttccttagattagggaacaaaatactcatggag
tagttacagagacaagtgtggagctagaagaaaggatggacatccgagac
tacccacctgggaatcttccctaatcagctacaatcggaccttattgtat
ttgcacgaggattttctgaaggaccctgtattagctgtctcggtgtgagg
ctatggcagggcttgccaaactaaggggatgctcaatattctatgaggta
ccagtcctgatgggagctagagatcatgaatcgtaagagtgtgctcccca
tagtgggggactac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_139975587_139976490
seq2: B6Ng01-060E14.b_45_949

seq1  GAATTCTGTCATGTATCCCATAATTCAATGGATAAAACATGAGGAACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCATGTATCCCATAATTCAATGGATAAAACATGAGGAACACA  50

seq1  TTAACAAAATGGCAATGTATTTCATTCTATTAAAAGCTTACTTCTGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAAAATGGCAATGTATTTCATTCTATTAAAAGCTTACTTCTGAAAA  100

seq1  CATAATTAGAAGCAAGATGCTTCCACGTTGAAACTTTAGTGGTAAGTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTAGAAGCAAGATGCTTCCACGTTGAAACTTTAGTGGTAAGTCTC  150

seq1  TGATGGCTTACTTTAAATTGATTTTTTCCAGTACTAAATTGTACTTTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCTTACTTTAAATTGATTTTTTCCAGTACTAAATTGTACTTTCTG  200

seq1  AAGCTCTAAAATGTGGGATAACTCATGTAGGTCTGCTTTTCTAATTCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTAAAATGTGGGATAACTCATGTAGGTCTGCTTTTCTAATTCAAG  250

seq1  GACATTTTATGAATGCTTTTATAGTAAATAAGATTTTTTTAAAAAATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTTATGAATGCTTTTATAGTAAATAAGATTTTTTTAAAAAATAAA  300

seq1  TTCAAACAATAAGCTATTCTTATAAACAATAATCAGGAATGTTTAATACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACAATAAGCTATTCTTATAAACAATAATCAGGAATGTTTAATACT  350

seq1  CAAATATACTATTGTAACTATCACAAGCACTAAATTGCAGATCAAGGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATACTATTGTAACTATCACAAGCACTAAATTGCAGATCAAGGTAA  400

seq1  GTTTGTGATCTATTAAAATACTGAAGAAAAAGGCATGCTTTTGAAAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGATCTATTAAAATACTGAAGAAAAAGGCATGCTTTTGAAAAAAT  450

seq1  TACATATTTCAAACTGAGAGAAGCGAATCTTTAGTTTTAAGACAAAGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTTCAAACTGAGAGAAGCGAATCTTTAGTTTTAAGACAAAGTAC  500

seq1  ATAATACAAAGTACTATCCTAACTACTTATATACATCATTTAGTCTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACAAAGTACTATCCTAACTACTTATATACATCATTTAGTCTTTCT  550

seq1  ATGAGCCAGTTAATATTATAATTCTTACTTCACAGCTATACAAAGAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCCAGTTAATATTATAATTCTTACTTCACAGCTATACAAAGAAAGG  600

seq1  ACCATGGTGCTAAGAAAACTTGACCTTTGTTATTTCACCATGTGGTAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGTGCTAAGAAAACTTGACCTTTGTTATTTCACCATGTGGTAAAG  650

seq1  TCAAGTTTTGAAACTAGTAGAGCTTAAGGGTTTTTCCTTCCCTATTTTAG  700
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCAAGTTTTGAAACTAGTAGAGCTTAAGGGTTTTTCCTTCTCTATTTTAG  700

seq1  AATACGAAAGGTTAAACATAGGATTTTATGAACCTTGGCAAACACTCTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACGAAAGGTTAAACATAGGATTTTATGAACCTTGGCAAACACTCTAC  750

seq1  CATTGAGCTGTATCCCCAGTGAGTCCAAGATATTAAATACACTGAAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAGCTGTATCCCCAGTGAGTCCAAGATATTAAATACACTGAAAAAT  800

seq1  TAATGATTATTTTATGATAATGTTAATGCTTATTTATCAATACTACTAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATTATTTTATGATAATGTTAATGCTTATTTATCAATACTACTAGG  850

seq1  TGTCCTATTGTAAACACTGTTTTAAAATTTAAATGGGGAT-GGGGTGGGT  899
      |||||||||||||||||||||||||||||||||||||| | |||| ||||
seq2  TGTCCTATTGTAAACACTGTTTTAAAATTTAAATGGGGGTGGGGGGGGGT  900

seq1  GGGTA  904
      ||| |
seq2  GGGGA  905