BAC Information

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BAC

Clone NameB6Ng01-060F16
Chromosome2 (Build37)
Map Location 116,834,923 - 116,992,311
singlet/doubletdoublet
Overlap geneLOC241621, Spred1
Upstream geneMrg1, G630016G05Rik, 2810405F15Rik, LOC433464, Tmco5, LOC100043557
Downstream geneLOC624574, 2610510H03Rik, Rasgrp1, Thbs1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060F16.bB6Ng01-060F16.g
ACCDH881350DH881351
length1,116641
definitionDH881350|Mus musculus domesticus DNA, BAC clone: B6Ng01-060F16, 5' end.DH881351|Mus musculus domesticus DNA, BAC clone: B6Ng01-060F16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,991,199 - 116,992,311)(116,834,923 - 116,835,563)
sequence
gaattctcttttgcagtttcaatcctggacatggactcttaaaatagtgc
tatcttggggctgaaaagatagcccactgtctgccatgctccagagatcc
tggtgtgagggtatctattccaagcacctacatggaggctcatgactgtc
tgtgacttcagttccaagggcagattctctcttctgtcctcctcaggcac
tatatgtatatggtgcagacacatgcaggcaaacactcacacacataaaa
tataagtaaggcctccctttctactcattttaaggaaggtttgacttcac
tatataagatgtctcccaaaacaaaacaaaacaaacaaacaaacaaaaaa
acagcttaaaagagcttccatgtcataaattaagtcagaaatttggggac
aacatagatgtacaaaagtaaagatgtacaaacttaaaaataccattaag
ccaaatcaacttcccattgaaatgttcttctgttgtataagccacggttg
tggacattttgatatggagatatggctgccatcttcctgactatatgcta
ctaacaatttgcaattcctttttctataaactttcttaagtggaaagtag
tgaacaggtgtgtattgttaattttgttggcttgccaaatcatatatggt
atgtagttgtttggctaaacactaatctaaactttgccacacattatgct
ttggacatgactacatgtaatcaatatacagtatgtgtcttttttttttt
taaagattttttatttattatatgtaagtacactgtaactgtcttcagac
acaccagaagagggtgtcagatctcattatgggtggttgtgagccaccat
gtggttgctggaatttgaactcaagacctttggaagagcagtcagtgctc
ttacccactgagccatctcgccagccctacagtatgtgtcttagtcaggg
tttctattcctgacaaacatcatgaccaagaagcagttggggagaaaggt
ttattcagcttacacttcatactctgttcacaccagaagtaggactgact
cagcggtcagagcagagctgatgcaaggcagtgagggatgtcttactggc
tgtttcctggcctgct
gaattcaacagaccaacaacttggaggctaatttctttttcttttttttt
aagatttatttatttttatttattaagtacaccattgctgtgttcagata
caccagaagaaagcatcagatctcattacagatggttgtgagccaccata
tggttgctgggaattgaactcaggacctctggaagagcagtcagtgctct
taactgctgagctatctctccagcccagaggctgatttcttcatgaaaat
ttcaccctttctacagaacagggaaagcagtagtatagaaaatagatgct
ggtcactgatgcctcaaatttgtctccttggttattcaagagcactgtta
ataggtcattcccaacaaggagggactatgaatatttactttcatcatgg
aggaagtagaggaaaagctgcccttctgttagactctaggtcatttatag
gtcatttatagaagatttcactgggaaatagataacaggtaaaagtaaat
acccagcattccaactccttggcggggatttgggcattcaattacgttat
tcttaaagcttcataaatacaaggctgtgctttcactctagatgctggcc
acttgattctactaagccttggcgggggttggggggaggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_116991199_116992311
seq2: B6Ng01-060F16.b_81_1161 (reverse)

seq1  AGCAGGCTGAGCAAGCCAGGGGAAACAAGCCAGTAAGGAACATCCCTCCA  50
               |||| ||||  |||||| ||||||||||  |||||||| ||
seq2  ---------AGCAGGCCA--GGAAAC-AGCCAGTAAG--ACATCCCT-CA  35

seq1  TGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTG  100
        |||| |||||||||| |||||  |||||| || |||||  ||||||| 
seq2  CTGCCT-TGCATCAGCT-CTGCT--CTGACC-GC-TGAGT--CAGTCCT-  76

seq1  ACTTCCTTGGTGATGAACAGCAGTATGGAAGTGTAAGCTGAATAAACCCT  150
      |||||  ||||| ||||||| ||||| |||||||||||||||||||||  
seq2  ACTTC--TGGTG-TGAACAG-AGTAT-GAAGTGTAAGCTGAATAAACC--  119

seq1  TTCCTCCCCAACTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAAC  200
      || ||||||||| ||||||||||||||||||||||| |||||||||||||
seq2  TTTCTCCCCAAC-TGCTTCTTGGTCATGATGTTTGT-CAGGAATAGAAAC  167

seq1  CCTGACTAAGACACATACTGTAGGGCTGGCGAGATGGCTCAGTGGGTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTAAGACACATACTGTAGGGCTGGCGAGATGGCTCAGTGGGTAAG  217

seq1  AGCACTGACTGCTCTTCCAAAGGTCTTGAGTTCAAATTCCAGCAACCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGACTGCTCTTCCAAAGGTCTTGAGTTCAAATTCCAGCAACCACA  267

seq1  TGGTGGCTCACAACCACCCATAATGAGATCTGACACCCTCTTCTGGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCTCACAACCACCCATAATGAGATCTGACACCCTCTTCTGGTGTG  317

seq1  TCTGAAGACAGTTACAGTGTACTTACATATAATAAATAAAAAATCTTT-A  399
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCTGAAGACAGTTACAGTGTACTTACATATAATAAATAAAAAATCTTTAA  367

seq1  AAAAAAAAAAGACACATACTGTATATTGATTACATGTAGTCATGTCCAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAGACACATACTGTATATTGATTACATGTAGTCATGTCCAAA  417

seq1  GCATAATGTGTGGCAAAGTTTAGATTAGTGTTTAGCCAAACAACTACATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAATGTGTGGCAAAGTTTAGATTAGTGTTTAGCCAAACAACTACATA  467

seq1  CCATATATGATTTGGCAAGCCAACAAAATTAACAATACACACCTGTTCAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATATGATTTGGCAAGCCAACAAAATTAACAATACACACCTGTTCAC  517

seq1  TACTTTCCACTTAAGAAAGTTTATAGAAAAAGGAATTGCAAATTGTTAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCCACTTAAGAAAGTTTATAGAAAAAGGAATTGCAAATTGTTAGT  567

seq1  AGCATATAGTCAGGAAGATGGCAGCCATATCTCCATATCAAAATGTCCAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATAGTCAGGAAGATGGCAGCCATATCTCCATATCAAAATGTCCAC  617

seq1  AACCGTGGCTTATACAACAGAAGAACATTTCAATGGGAAGTTGATTTGGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGTGGCTTATACAACAGAAGAACATTTCAATGGGAAGTTGATTTGGC  667

seq1  TTAATGGTATTTTTAAGTTTGTACATCTTTACTTTTGTACATCTATGTTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGTATTTTTAAGTTTGTACATCTTTACTTTTGTACATCTATGTTG  717

seq1  TCCCCAAATTTCTGACTTAATTTATGACATGGAAGCTCTTTTAAGCTGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAAATTTCTGACTTAATTTATGACATGGAAGCTCTTTTAAGCTGTT  767

seq1  TTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGGGAGACATCTTATATAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGGGAGACATCTTATATAG  817

seq1  TGAAGTCAAACCTTCCTTAAAATGAGTAGAAAGGGAGGCCTTACTTATAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCAAACCTTCCTTAAAATGAGTAGAAAGGGAGGCCTTACTTATAT  867

seq1  TTTATGTGTGTGAGTGTTTGCCTGCATGTGTCTGCACCATATACATATAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTGTGTGAGTGTTTGCCTGCATGTGTCTGCACCATATACATATAG  917

seq1  TGCCTGAGGAGGACAGAAGAGAGAATCTGCCCTTGGAACTGAAGTCACAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGAGGAGGACAGAAGAGAGAATCTGCCCTTGGAACTGAAGTCACAG  967

seq1  ACAGTCATGAGCCTCCATGTAGGTGCTTGGAATAGATACCCTCACACCAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCATGAGCCTCCATGTAGGTGCTTGGAATAGATACCCTCACACCAG  1017

seq1  GATCTCTGGAGCATGGCAGACAGTGGGCTATCTTTTCAGCCCCAAGATAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTGGAGCATGGCAGACAGTGGGCTATCTTTTCAGCCCCAAGATAG  1067

seq1  CACTATTTTAAGAG  1113
      ||||||||||||||
seq2  CACTATTTTAAGAG  1081

seq1: chr2_116834923_116835563
seq2: B6Ng01-060F16.g_69_709

seq1  GAATTCAACAGACCAACAACTTGGAGGCTAATTTCTTTTTCTTTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGACCAACAACTTGGAGGCTAATTTCTTTTTCTTTTTTTTT  50

seq1  AAGATTTATTTATTTTTATTTATTAAGTACACCATTGCTGTGTTCAGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTATTTATTTTTATTTATTAAGTACACCATTGCTGTGTTCAGATA  100

seq1  CACCAGAAGAAAGCATCAGATCTCATTACAGATGGTTGTGAGCCACCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAAGAAAGCATCAGATCTCATTACAGATGGTTGTGAGCCACCATA  150

seq1  TGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCT  200

seq1  TAACTGCTGAGCTATCTCTCCAGCCCAGAGGCTGATTTCTTCATGAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGCTGAGCTATCTCTCCAGCCCAGAGGCTGATTTCTTCATGAAAAT  250

seq1  TTCACCCTTTCTACAGAACAGGGAAAGCAGTAGTATAGAAAATAGATGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCCTTTCTACAGAACAGGGAAAGCAGTAGTATAGAAAATAGATGCT  300

seq1  GGTCACTGATGCCTCAAATTTGTCTCCTTGGTTATTCAAGAGCACTGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACTGATGCCTCAAATTTGTCTCCTTGGTTATTCAAGAGCACTGTTA  350

seq1  ATAGGTCATTCCCAACAAGGAGGGACTATGAATATTTACTTTCATCATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTCATTCCCAACAAGGAGGGACTATGAATATTTACTTTCATCATGG  400

seq1  AGGAAGTAGAGGAAAAGCTGCCCTTCTGTTAGACTCTAGGTCATTTATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTAGAGGAAAAGCTGCCCTTCTGTTAGACTCTAGGTCATTTATAG  450

seq1  GTCATTTATAGAAGATTTCACTGGGAAATAGATAACAGGTAAAAGTAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTATAGAAGATTTCACTGGGAAATAGATAACAGGTAAAAGTAAAT  500

seq1  ACCCAGCATTCCAACTCCTTGGCGGGGATTTGGGCATTCAATTACGTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGCATTCCAACTCCTTGGCGGGGATTTGGGCATTCAATTACGTTAT  550

seq1  TCTTAAAGCTTCATAAATACAAGGCTGTGCTTTCACTCTAGATGCTGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAGCTTCATAAATACAAGGCTGTGCTTTCACTCTAGATGCTGGCC  600

seq1  ACTTGATTCTACTAAGCCTTGGCGGGGGTTGGGGGGAGGTT  641
      |||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATTCTACTAAGCCTTGGCGGGGGTTGGGGGGAGGTT  641