BAC Information

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BAC

Clone NameB6Ng01-062I15
Chromosome2 (Build37)
Map Location 77,613,203 - 77,770,740
singlet/doubletdoublet
Overlap geneZfp533, BC003993
Upstream geneTtn, 2610301F02Rik, Sestd1, LOC623706, LOC667906
Downstream geneLOC667920, OTTMUSG00000016703, LOC383717, LOC100040476, LOC100040494, 4930401B11Rik, Ube2e3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062I15.bB6Ng01-062I15.g
ACCDH882903DH882904
length1,1321,097
definitionDH882903|Mus musculus domesticus DNA, BAC clone: B6Ng01-062I15, 5' end.DH882904|Mus musculus domesticus DNA, BAC clone: B6Ng01-062I15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,769,595 - 77,770,740)(77,613,203 - 77,614,298)
sequence
gaattccttatggccggcaaattgtttgtatgctttttgtttcagtttgt
tttggcttttgttgttgtttgttgctttttgtttgcttttgttgttttgt
ttttccaggcagagttcctctgtgtaactctggctgcactggaacttgct
ctgtagactaggctggtcttgaacacagagatctgcctgcctctgcctcc
tgagttctgggattaatgtcctgtgccaccacccagattctttgattctt
aattttagggtggacattgaagtactgcttttgctgttatagcttgctta
tatattcacacacctttttatattaagtttttatttatattatagcatga
ttatattgaaataagaaatctaaaattagtaccagtactatagccgtatc
atttactctgtgagggtcactaaaataaccctcaggggaggcaccctatg
ccttgtgcacttcagacctgttccatcctgccagagaactcctgggactt
ttgctttaggtccttggcttgtgaccactgtcacccttaccagtcaccta
ctctatgccagtcccagacacacacaggtgcaaggttattgtagatatgt
atatgaaacacaaattatagtaccatgtaggttatatatttaacttccct
caatgctctctgattttattgagttttaagtgtcaaacaatagattaatg
ggatccattcttgtttgttcaatgttttcagtactgcagttttcagaatg
atatctaatgagtctaatgtttagagtagtgttaactagaataacagtta
ctgacattgcttgcactcgctcagtatagctacaaggaggtatttgtaac
aaagcctctttctgcccatcatgtatagtttctagatttattcctttacc
aaggggagtttgaatcagatgagtgaatcttgttagttccaggagttgtt
ttgctgtgcccatgctagaagcttttgtattcagactgtggatcagtgcc
aggacatgagccatagtaaaatagttcattagatgtgtgccgttgtaaag
cccttggcatcactgatactgactttccagtataacagagttgtttttta
agtacactgggtttctctgtgtagatacacag
gaattctgggcttataaaaataagcacaatatcagtcctgggctctttgt
aaaaatttctaaaaatggggctttgaagacatgagacttctttttaatta
tataacttgggatgatgtaagggagagggggaaagctggtttcagcccag
ttttgaaaaacattcttcttagatggcttctgtcgtcttccgggggcttg
ggaagtagtagtgctcaggcactcggattcatagagaaccaaaaggcagc
ttcgtgccagctaaagaaaagttgcagctgactagccccactgtggtgaa
agagagcaagtgaggggaggaggagaccggctgttctgtgggatcctgtc
tgcaccaatccgatcccatcaccacagaatacggcatcaaaccgtgacgc
ttcatgacggcgaaactcagacagggacatcttcattacagacacggata
aagttgcttgctaaggctaggtgagcttcattttatacctatctttgcca
ggtcagccaaagacaccaagccaagctcattttggatgccttggtttttt
tgttttgttttgtttttgtttttgttttttggtcaaaactgtgttcccca
ttccatcctatccattcccactgtctctccacgttctggggcattctgac
tgaacggatctctgctgtttctatttgtttcttttagattttactgttac
ttctgtttccttcacttaatactcagaccttcggtcttttgccatcgctc
actgaagagcatgctattttcttctcaataataataataagaaacccaaa
tcactgtactccagttaattcataagtgacacaatcacacagctagtttg
atgaagccacttaaacacactcaccattcacaggccctgtagatgccagt
gaaaacatctattctggtagctctaaaacagaggggccccacataggaat
atactatcaactgcacttttatgcggctgacctaccacctggagatcttc
ttaaaataaaagctttcaattatttataaatcaaagggaatctcagttaa
ttttaaatagggaattagttgaagaatcctggtcgcaagtgattaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_77769595_77770740
seq2: B6Ng01-062I15.b_45_1176 (reverse)

seq1  CTGTGTATCTAACACAGAAGAAAACCCAAGTTGTACTTAGAAAACAACTC  50
      |||||||||| |||||||   |||||||   |||||||| ||||||||||
seq2  CTGTGTATCT-ACACAGA--GAAACCCA--GTGTACTTAAAAAACAACTC  45

seq1  TGTTATACTTGGAAAGTCCAGTATCAGTGATGCCAAGGGGCTTTACAACG  100
      |||||||| |||||||| |||||||||||||||||| |||||||||||||
seq2  TGTTATAC-TGGAAAGT-CAGTATCAGTGATGCCAA-GGGCTTTACAACG  92

seq1  GCACCACATCTTAATGAACTATTTTAACTATGGCTCATTGTCCTGGCACT  150
      ||| |||||| |||||||||||||| ||||||||||| ||||||||||||
seq2  GCA-CACATC-TAATGAACTATTTT-ACTATGGCTCA-TGTCCTGGCACT  138

seq1  GATCCACAGTCTGAATTACAAAAGCTTCTAGCATGGGCACAGCAAAACAA  200
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GATCCACAGTCTGAA-TACAAAAGCTTCTAGCATGGGCACAGCAAAACAA  187

seq1  CTCCTGGAACTAACAAGATTCACTCATCCTGATTCAAACTCCCCTTGGTA  250
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTCCTGGAACTAACAAGATTCACTCAT-CTGATTCAAACTCCCCTTGGTA  236

seq1  AAGGAATAAATCTAGAAACTATACATGATGGGCAGAAAGAGGCTTTGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATAAATCTAGAAACTATACATGATGGGCAGAAAGAGGCTTTGTTA  286

seq1  CAAATACCTCCTTGTAGCTATACTGAGCGAGTGCAAGCAATGTCAGTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACCTCCTTGTAGCTATACTGAGCGAGTGCAAGCAATGTCAGTAAC  336

seq1  TGTTATTCTAGTTAACACTACTCTAAACATTAGACTCATTAGATATCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTCTAGTTAACACTACTCTAAACATTAGACTCATTAGATATCATT  386

seq1  CTGAAAACTGCAGTACTGAAAACATTGAACAAACAAGAATGGATCCCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAACTGCAGTACTGAAAACATTGAACAAACAAGAATGGATCCCATT  436

seq1  AATCTATTGTTTGACACTTAAAACTCAATAAAATCAGAGAGCATTGAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATTGTTTGACACTTAAAACTCAATAAAATCAGAGAGCATTGAGGG  486

seq1  AAGTTAAATATATAACCTACATGGTACTATAATTTGTGTTTCATATACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAATATATAACCTACATGGTACTATAATTTGTGTTTCATATACAT  536

seq1  ATCTACAATAACCTTGCACCTGTGTGTGTCTGGGACTGGCATAGAGTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACAATAACCTTGCACCTGTGTGTGTCTGGGACTGGCATAGAGTAGG  586

seq1  TGACTGGTAAGGGTGACAGTGGTCACAAGCCAAGGACCTAAAGCAAAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGGTAAGGGTGACAGTGGTCACAAGCCAAGGACCTAAAGCAAAAGT  636

seq1  CCCAGGAGTTCTCTGGCAGGATGGAACAGGTCTGAAGTGCACAAGGCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGAGTTCTCTGGCAGGATGGAACAGGTCTGAAGTGCACAAGGCATA  686

seq1  GGGTGCCTCCCCTGAGGGTTATTTTAGTGACCCTCACAGAGTAAATGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCCTCCCCTGAGGGTTATTTTAGTGACCCTCACAGAGTAAATGATA  736

seq1  CGGCTATAGTACTGGTACTAATTTTAGATTTCTTATTTCAATATAATCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTATAGTACTGGTACTAATTTTAGATTTCTTATTTCAATATAATCAT  786

seq1  GCTATAATATAAATAAAAACTTAATATAAAAAGGTGTGTGAATATATAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAATATAAATAAAAACTTAATATAAAAAGGTGTGTGAATATATAAG  836

seq1  CAAGCTATAACAGCAAAAGCAGTACTTCAATGTCCACCCTAAAATTAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTATAACAGCAAAAGCAGTACTTCAATGTCCACCCTAAAATTAAGA  886

seq1  ATCAAAGAATCTGGGTGGTGGCACAGGACATTAATCCCAGAACTCAGGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGAATCTGGGTGGTGGCACAGGACATTAATCCCAGAACTCAGGAG  936

seq1  GCAGAGGCAGGCAGATCTCTGTGTTCAAGACCAGCCTAGTCTACAGAGCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCAGGCAGATCTCTGTGTTCAAGACCAGCCTAGTCTACAGAGCA  986

seq1  AGTTCCAGTGCAGCCAGAGTTACACAGAGGAACTCTGCCTGGAAAAACAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGTGCAGCCAGAGTTACACAGAGGAACTCTGCCTGGAAAAACAA  1036

seq1  AACAACAAAAGCAAACAAAAAGCAACAAACAACAACAAAAGCCAAAACAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAAAAGCAAACAAAAAGCAACAAACAACAACAAAAGCCAAAACAA  1086

seq1  ACTGAAACAAAAAGCATACAAACAATTTGCCGGCCATAAGGAATTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACAAAAAGCATACAAACAATTTGCCGGCCATAAGGAATTC  1132

seq1: chr2_77613203_77614298
seq2: B6Ng01-062I15.g_65_1161

seq1  GAATTCTGGGCTTATAAAAATAAGCACAATATCAGTCCTGGGCTCTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGCTTATAAAAATAAGCACAATATCAGTCCTGGGCTCTTTGT  50

seq1  AAAAATTTCTAAAAATGGGGCTTTGAAGACATGAGACTTCTTTTTAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTCTAAAAATGGGGCTTTGAAGACATGAGACTTCTTTTTAATTA  100

seq1  TATAACTTGGGATGATGTAAGGGAGAGGGGGAAAGCTGGTTTCAGCCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTTGGGATGATGTAAGGGAGAGGGGGAAAGCTGGTTTCAGCCCAG  150

seq1  TTTTGAAAAACATTCTTCTTAGATGGCTTCTGTCGTCTTCCGGGGGCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAAAACATTCTTCTTAGATGGCTTCTGTCGTCTTCCGGGGGCTTG  200

seq1  GGAAGTAGTAGTGCTCAGGCACTCGGATTCATAGAGAACCAAAAGGCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTAGTAGTGCTCAGGCACTCGGATTCATAGAGAACCAAAAGGCAGC  250

seq1  TTCGTGCCAGCTAAAGAAAAGTTGCAGCTGACTAGCCCCACTGTGGTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTGCCAGCTAAAGAAAAGTTGCAGCTGACTAGCCCCACTGTGGTGAA  300

seq1  AGAGAGCAAGTGAGGGGAGGAGGAGACCGGCTGTTCTGTGGGATCCTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCAAGTGAGGGGAGGAGGAGACCGGCTGTTCTGTGGGATCCTGTC  350

seq1  TGCACCAATCCGATCCCATCACCACAGAATACGGCATCAAACCGTGACGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCAATCCGATCCCATCACCACAGAATACGGCATCAAACCGTGACGC  400

seq1  TTCATGACGGCGAAACTCAGACAGGGACATCTTCATTACAGACACGGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGACGGCGAAACTCAGACAGGGACATCTTCATTACAGACACGGATA  450

seq1  AAGTTGCTTGCTAAGGCTAGGTGAGCTTCATTTTATACCTATCTTTGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGCTTGCTAAGGCTAGGTGAGCTTCATTTTATACCTATCTTTGCCA  500

seq1  GGTCAGCCAAAGACACCAAGCCAAGCTCATTTTGGATGCCTTGGTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGCCAAAGACACCAAGCCAAGCTCATTTTGGATGCCTTGGTTTTTT  550

seq1  TGTTTTGTTTTGTTTTTGTTTTTGTTTTTTGGTCAAAACTGTGTTCCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTTTGTTTTTGTTTTTGTTTTTTGGTCAAAACTGTGTTCCCCA  600

seq1  TTCCATCCTATCCATTCCCACTGTCTCTCCACGTTCTGGGGCATTCTGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCCTATCCATTCCCACTGTCTCTCCACGTTCTGGGGCATTCTGAC  650

seq1  TGAACGGATCTCTGCTGTTTCTATTTGTTTCTTTTAGATTTTACTGTTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACGGATCTCTGCTGTTTCTATTTGTTTCTTTTAGATTTTACTGTTAC  700

seq1  TTCTGTTTCCTTCACTTAATACTCAGACCTTCGGTCTTTTGCCATCGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTCCTTCACTTAATACTCAGACCTTCGGTCTTTTGCCATCGCTC  750

seq1  ACTGAAGAGCATGCTATTTTCTTCTCAATAATAATAATAAGAAACCCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGAGCATGCTATTTTCTTCTCAATAATAATAATAAGAAACCCAAA  800

seq1  TCACTGTACTCCAGTTAATTCATAAGTGACACAATCACACAGCTAGTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTACTCCAGTTAATTCATAAGTGACACAATCACACAGCTAGTTTG  850

seq1  ATGAAGCCACTTAAACACACTCACCATTCACAGGCCCTGTAGATGCCAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCCACTTAAACACACTCACCATTCACAGGCCCTGTAGATGCCAGT  900

seq1  GAAAACATCTATTCTGTTAGCTCTAAAACAGAGGGGCCCCACATAGGGAC  950
      |||||||||||||||| |||||||||||||||||||||||||||| ||| 
seq2  GAAAACATCTATTCTGGTAGCTCTAAAACAGAGGGGCCCCACATA-GGAA  949

seq1  TATACTATCAACTGCACTTTTATGC-GCTGACCTACCA-CTGGAGATCTT  998
      ||||||||||||||||||||||||| |||||||||||| |||||||||||
seq2  TATACTATCAACTGCACTTTTATGCGGCTGACCTACCACCTGGAGATCTT  999

seq1  CTT-AAATAAAGGCTTTCAAATATTTATAAATC-AAGGGATTCTCAGTTA  1046
      ||| ||||||| |||||||| |||||||||||| |||||| |||||||||
seq2  CTTAAAATAAAAGCTTTCAATTATTTATAAATCAAAGGGAATCTCAGTTA  1049

seq1  TTTTCAAATAGTGTATTTAGTTGAAGGATCTTTGGTCGCAAGTGATTAAA  1096
       ||| |||||| | | |||||||||| |||  ||||||||||||||||||
seq2  ATTTTAAATAG-GGAATTAGTTGAAGAATC-CTGGTCGCAAGTGATTAAA  1097