BAC Information

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BAC

Clone NameB6Ng01-062L13
Chromosome2 (Build37)
Map Location 21,895,427 - 21,896,547
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675912, C130046B21Rik, 4933434I06Rik, Thnsl1, Gpr158
Downstream geneLOC637235, Myo3a, LOC100041703, Myo3a, Gad2, Apbb1ip, Pdss1, Abi1, 1200016E24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062L13.bB6Ng01-062L13.g
ACCDH883029DH883030
length8851,121
definitionDH883029|Mus musculus domesticus DNA, BAC clone: B6Ng01-062L13, 5' end.DH883030|Mus musculus domesticus DNA, BAC clone: B6Ng01-062L13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcgaagtctttaagttcatttttaatttttgtttgacccagttg
tcactgagttgagagttgttcaattaccatgagtttgtaagttttttatt
gtttctattgttgttgaagtcaagcttaaatccatggtgatatgataaga
tgaaaggggatattagttttcttgtatctgttgaggcttgctttgtgcct
gagtatgtggtcaatttggagaaagttctgtgaggtgctgagaagaaggt
atatctctttttgtgtgggttaaatattctatagatggttgttgttgggg
tttttttggcattttttagcttattttgattcataacctctgttaatttc
cttatttctctgtttagtttctgtcttgatgacctgtccactggtgaaag
tgaatgttaagctctcccactattaatgtgtgattaaaggtttagtaaca
tttctttttcaactgtgggtactcttgcatgtgagacataggtgctcaga
attctcttgttttgtttgtctgtttgttttgttttgtttttcctttaatg
agtatcaagtctccttccacatctattttagttacttttggttgaaagtc
tattttactagatattagaatggctactccagctcgtttctttggtctgt
tttgcttggaaaccctttttccaaccctttaccctttactctgaggtagt
gtctatctttgtggctgaggtatatttcttgtatacagcagaataataga
tcctattttcacatccatttagtagtctatctttttactgaggaactgag
accatttatgattagagatattagtgaccaacaattgctagtttctgtta
tttgaatggtggcaatagtagtgttatgtgattgt
gaattctatgccttgagtaggtacttactgcatgcttggtgatccgatga
aagtagcaactggcagtgagacagagctctcatctctgccagccagctgc
tgtctgtctttcacggactgcttatcaggatctgtcctgtgatagacata
gtcctacaatatctggtgccaagatttgatttgaaaccaaatggaaaaga
cccaaacagttggtgaatatctaggtgtttctgagttacgttgctatcac
cttcattatcatctgaggcaaggaaatatgagctggtacagttcttctta
aagaggtcagatgctggaacagaaaggaagaaggggccatataaattgat
gcaatagaagtaatttaaatccacttaattttcttatggcagtgatgggg
attgaacctagaaattgtaaatgctaggcaactgctctaccaactaacca
tatctctagcccttcttattttttgttaagttttgagatagccttgaaat
tccaaacttttgatccctgaccctcctatggcagtgtctctagtagttag
gattgcagaactgcaccactagagtatgtggggagaggttattgtaactt
ttaaatatatcttattgataaaacatatgtgtacatgtggaggccagaca
atactttgttcattctctcctttccttgtatgcattctggggattgaact
caggtcatccggcttggtagcaaacacctttacgtgctaaaacatcacac
tggcctgctattgtaacttttattggcaatttttactgtttaatttaata
ataaaaaaaatctttcctcttaagaggaaatgtacactcagtaaattggg
cttactagtcttcaaaataaggcacacatgcagaatgcacctgtttaatt
aataataattatttttgtccttacataaactagtggcactgatgaagaac
tgagatgactctgaagaacatctcctgtgatgagataggctagctctcct
ggcacggatatcattattatttgtgctcactttgcagggctgtggaacca
ttcttaggcataactagaagccagagcatctttaagcacttgggttaatc
agacacaaaatttattatctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_21895427_21896547
seq2: B6Ng01-062L13.g_68_1188 (reverse)

seq1  CAGATACATAAATATTGTGTCTGAATTAACCC-AGTGCTAAAAGATGGCT  49
      |||||| |||||| ||||||||| |||||||| |||||| |||||| |||
seq2  CAGATA-ATAAATTTTGTGTCTG-ATTAACCCAAGTGCTTAAAGAT-GCT  47

seq1  CTGGCCTCCTAGTTATGCCTAAGGATGGTTCCACAGCCCTGC-AAGTGAG  98
      |||| || ||||||||||||||| |||||||||||||||||| |||||||
seq2  CTGG-CTTCTAGTTATGCCTAAGAATGGTTCCACAGCCCTGCAAAGTGAG  96

seq1  CACAGATAATAATGATTATCCGTGCCAGGAGAGGCTAGCCTATCTCATTC  148
      |||| |||||||||| |||||||||||||||| |||||||||||||| ||
seq2  CACAAATAATAATGA-TATCCGTGCCAGGAGA-GCTAGCCTATCTCA-TC  143

seq1  ACAGGAGATGTTC-TCAGAGTCATCTCAGTTCTTCATCAGTGCCACTAG-  196
      ||||||||||||| ||||||||||||||||||||||||||||||||||| 
seq2  ACAGGAGATGTTCTTCAGAGTCATCTCAGTTCTTCATCAGTGCCACTAGT  193

seq1  TTATGTAAGGACAAAAATAATTA-TATTAATTAAACAGGTGGCATTCTGC  245
      ||||||||||||||||||||||| |||||||||||||||| |||||||||
seq2  TTATGTAAGGACAAAAATAATTATTATTAATTAAACAGGT-GCATTCTGC  242

seq1  ATGTGTGCCTTATTTTGAAGACTAGTAAG-CCAATTTACTGAGTGTACAT  294
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATGTGTGCCTTATTTTGAAGACTAGTAAGCCCAATTTACTGAGTGTACAT  292

seq1  TTCCTCTTA--AGGGAAGATTTTTTTTATTATTAAATTAAACAGTAAAAA  342
      |||||||||  ||| |||||||||||||||||||||||||||||||||||
seq2  TTCCTCTTAAGAGGAAAGATTTTTTTTATTATTAAATTAAACAGTAAAAA  342

seq1  TTGCCAATAAAAGTTACAATAGCAGGCCAGTGTGATGTTTTAGCACGTAA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAATAAAAGTTACAATAGCAGGCCAGTGTGATGTTTTAGCACGTAA  392

seq1  AGGTGTTTGCTACCAAGCCGGATGACCTGAGTTCAATCCCCAGAATGCAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTTGCTACCAAGCCGGATGACCTGAGTTCAATCCCCAGAATGCAT  442

seq1  ACAAGGAAAGGAGAGAATGAACAAAGTATTGTCTGGCCTCCACATGTACA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAAAGGAGAGAATGAACAAAGTATTGTCTGGCCTCCACATGTACA  492

seq1  CATATGTTTTATCAATAAGATATATTTAAAAGTTACAATAACCTCTCCCC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTTTTATCAATAAGATATATTTAAAAGTTACAATAACCTCTCCCC  542

seq1  ACATACTCTAGTGGTGCAGTTCTGCAATCCTAACTACTAGAGACACTGCC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACTCTAGTGGTGCAGTTCTGCAATCCTAACTACTAGAGACACTGCC  592

seq1  ATAGGAGGGTCAGGGATCAAAAGTTTGGAATTTCAAGGCTATCTCAAAAC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGGGTCAGGGATCAAAAGTTTGGAATTTCAAGGCTATCTCAAAAC  642

seq1  TTAACAAAAAATAAGAAGGGCTAGAGATATGGTTAGTTGGTAGAGCAGTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAAAAAATAAGAAGGGCTAGAGATATGGTTAGTTGGTAGAGCAGTT  692

seq1  GCCTAGCATTTACAATTTCTAGGTTCAATCCCCATCACTGCCATAAGAAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGCATTTACAATTTCTAGGTTCAATCCCCATCACTGCCATAAGAAA  742

seq1  ATTAAGTGGATTTAAATTACTTCTATTGCATCAATTTATATGGCCCCTTC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTGGATTTAAATTACTTCTATTGCATCAATTTATATGGCCCCTTC  792

seq1  TTCCTTTCTGTTCCAGCATCTGACCTCTTTAAGAAGAACTGTACCAGCTC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCTGTTCCAGCATCTGACCTCTTTAAGAAGAACTGTACCAGCTC  842

seq1  ATATTTCCTTGCCTCAGATGATAATGAAGGTGATAGCAACGTAACTCAGA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCCTTGCCTCAGATGATAATGAAGGTGATAGCAACGTAACTCAGA  892

seq1  AACACCTAGATATTCACCAACTGTTTGGGTCTTTTCCATTTGGTTTCAAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCTAGATATTCACCAACTGTTTGGGTCTTTTCCATTTGGTTTCAAA  942

seq1  TCAAATCTTGGCACCAGATATTGTAGGACTATGTCTATCACAGGACAGAT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCTTGGCACCAGATATTGTAGGACTATGTCTATCACAGGACAGAT  992

seq1  CCTGATAAGCAGTCCGTGAAAGACAGACAGCAGCTGGCTGGCAGAGATGA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATAAGCAGTCCGTGAAAGACAGACAGCAGCTGGCTGGCAGAGATGA  1042

seq1  GAGCTCTGTCTCACTGCCAGTTGCTACTTTCATCGGATCACCAAGCATGC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCTGTCTCACTGCCAGTTGCTACTTTCATCGGATCACCAAGCATGC  1092

seq1  AGTAAGTACCTACTCAAGGCATAGAATTC  1121
      |||||||||||||||||||||||||||||
seq2  AGTAAGTACCTACTCAAGGCATAGAATTC  1121