BAC Information

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BAC

Clone NameB6Ng01-063J15
Chromosome2 (Build37)
Map Location 169,658,794 - 169,797,192
singlet/doubletdoublet
Overlap geneTshz2, LOC100043737
Upstream geneZfp64, LOC100043909, EG668954
Downstream geneLOC100043910, Zfp217, Silg111, LOC100043739, Bcas1, LOC228916, Cyp24a1, Pfdn4, 4930470P17Rik, Dok5, LOC668955
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063J15.bB6Ng01-063J15.g
ACCDH883645DH883646
length1,055824
definitionDH883645|Mus musculus domesticus DNA, BAC clone: B6Ng01-063J15, 5' end.DH883646|Mus musculus domesticus DNA, BAC clone: B6Ng01-063J15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(169,796,127 - 169,797,192)(169,658,794 - 169,659,613)
sequence
gaattcctgtcctggctttcttcactaaaggatttcaatgtggatgtgta
agccaaataaatccttttctccccaacttgcttttggtcatggtgtctca
tcacagcaatagagaccttgaggaagacacgtgcctttaaccatcttatt
ccaacaagttaaatttaaactcacggtgacctcgggtccagcaacagcac
tcagggtggcttgttggctccctgtgttcaggagtacatgaaagccctgc
cagtgtagacagctaatcttagtcaccttagagagggaaaccggctatat
agcttgcttgggactgaccttactttaacatggaaagacacacaggcagg
gaaatgattcagccttggtccaatgtggtcattttgttacctttcttcca
tctttttataacatttttttttctatcaagaattactggtgcttctccac
tagcttaccatgtcattttatcctaaattgattactcatacctttgctga
ccaactgacggttccgccgatggaacttaacacacttatctcagcaaaac
cttcagatctgcagccgatcgactcaacggttttaggtgtggaaactcaa
gctgaggactcaggcatagatgtgtgagaagacttcgctgcaaagttcag
ttctgcgctgctaacaagtaccaacggtggagacaacctaaatatgcagc
cagaggccaaccgcatcaggttgcacgcggccagccactccacgggaggt
ttctgtgtcaccttaaagaattggtgtaggatattcaatttgaaaggtgt
tcagaatgatattgaaaaaagaacttaccaagccatatgcagatgcagtg
actagtcctgattgtcagtttgagagtctagagtcacgtgggagtgggct
ctgggcatgcccaggtaggcttttttgtgttgtgggtgggcctagtgcca
gcctctcctgagaggggctgcagacagaatgagttacatactcagtgact
tcttgtgaccaatccctaatgataaggagcatcactgggtgagtagcggg
acttc
gaattcctgctttaaacttcaacccttcctcagacgggattgagaggggc
agtgtggagcttaggtgccttcaaacagagagtgaaatggtcccggtgtc
tctgtttcccaaaatgtagctttatgtagtccccaaaatgaaatgagggt
gcgtcagtgtgccagaacgtgacccggcgtgccccttctttacccaccat
tctcgttgttcaggcactgaaagagcctgacttattttctctttcttgga
cagagcacaggaatctctcaaactttaaatgacccagcaccatgaatcgc
cccctaacagccttagaaggcaggaaaaccattgccatcctaatatttca
caggaaacaccttcccctcccacccacccactgctctgagccagatttac
acagtatacaaagtgtctgcagccctaaccgcgggtgactcaggaacagg
gagcctgcagattaatgtcctcatccgcagtgatgaattctacttttgtg
tgtgtgtaccgagagcagtgccaatggattgccggtaggcaggctcatct
tcaagggtaactccgttccaaaaaaggaccggtgtcagcctgtgttgtaa
ggcagtttgctgctgtgcaaaccctgtccatcacccacctccagccttgc
tagcacactccgttattacactgctgatccaagggaatgacccaggcact
gacatggtgatgagagtgggtcagctctttggagtcatctgtgacattaa
gagcccccttccctttcagggagtgagaggaattcctcttttctccatat
aaggtgtggagtatccagacatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_169796127_169797192
seq2: B6Ng01-063J15.b_45_1099 (reverse)

seq1  GAAGTCCCGCCTACTCACCCAGTGATTGGCTCCTTTATTCATTAGGGGAT  50
      ||||||||| ||||||||||||||||  |||||||   |||||| |||||
seq2  GAAGTCCCG-CTACTCACCCAGTGAT--GCTCCTT--ATCATTA-GGGAT  44

seq1  TGGTTCACAAGAAGTCACCTGAGTATGTAACTCATTCCTTGTCTGCAGCC  100
      ||| ||||||||||||| |||||||||||||||||||  |||||||||||
seq2  TGG-TCACAAGAAGTCA-CTGAGTATGTAACTCATTC--TGTCTGCAGCC  90

seq1  CCTCTCAGGAGAGGCTGGCACTAGGCCCACCCACAACACAAAATAGCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCTCTCAGGAGAGGCTGGCACTAGGCCCACCCACAACACAAAAAAGCCTA  140

seq1  CCTGGGCATGCCCAGAGCCCACTCCCACGTGACTCTAGACTCTCAAACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGCATGCCCAGAGCCCACTCCCACGTGACTCTAGACTCTCAAACTG  190

seq1  ACAATCAGGACTAGTCACTGCATCTGCATATTGCTTGGTAAGGTTCTTTT  250
      ||||||||||||||||||||||||||||||| ||||||||| ||||||||
seq2  ACAATCAGGACTAGTCACTGCATCTGCATATGGCTTGGTAA-GTTCTTTT  239

seq1  TTCAATATCATTCTGAACACCTTTCAAATTGAATATCCTACACCAATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATATCATTCTGAACACCTTTCAAATTGAATATCCTACACCAATTCT  289

seq1  TTAAGGTGACACAGAAACCTCCCGTGGAGTGGCTGGCCGCGTGCAACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTGACACAGAAACCTCCCGTGGAGTGGCTGGCCGCGTGCAACCTG  339

seq1  ATGCGGTTGGCCTCTGGCTGCATATTTAGGTTGTCTCCACCGTTGGTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGGTTGGCCTCTGGCTGCATATTTAGGTTGTCTCCACCGTTGGTACT  389

seq1  TGTTAGCAGCGCAGAACTGAACTTTGCAGCGAAGTCTTCTCACACATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGCAGCGCAGAACTGAACTTTGCAGCGAAGTCTTCTCACACATCTA  439

seq1  TGCCTGAGTCCTCAGCTTGAGTTTCCACACCTAAAACCGTTGAGTCGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGAGTCCTCAGCTTGAGTTTCCACACCTAAAACCGTTGAGTCGATC  489

seq1  GGCTGCAGATCTGAAGGTTTTGCTGAGATAAGTGTGTTAAGTTCCATCGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCAGATCTGAAGGTTTTGCTGAGATAAGTGTGTTAAGTTCCATCGG  539

seq1  CGGAACCGTCAGTTGGTCAGCAAAGGTATGAGTAATCAATTTAGGATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAACCGTCAGTTGGTCAGCAAAGGTATGAGTAATCAATTTAGGATAAA  589

seq1  ATGACATGGTAAGCTAGTGGAGAAGCACCAGTAATTCTTGATAGAAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATGGTAAGCTAGTGGAGAAGCACCAGTAATTCTTGATAGAAAAAA  639

seq1  AAATGTTATAAAAAGATGGAAGAAAGGTAACAAAATGACCACATTGGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTATAAAAAGATGGAAGAAAGGTAACAAAATGACCACATTGGACC  689

seq1  AAGGCTGAATCATTTCCCTGCCTGTGTGTCTTTCCATGTTAAAGTAAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGAATCATTTCCCTGCCTGTGTGTCTTTCCATGTTAAAGTAAGGT  739

seq1  CAGTCCCAAGCAAGCTATATAGCCGGTTTCCCTCTCTAAGGTGACTAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCCAAGCAAGCTATATAGCCGGTTTCCCTCTCTAAGGTGACTAAGA  789

seq1  TTAGCTGTCTACACTGGCAGGGCTTTCATGTACTCCTGAACACAGGGAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTGTCTACACTGGCAGGGCTTTCATGTACTCCTGAACACAGGGAGC  839

seq1  CAACAAGCCACCCTGAGTGCTGTTGCTGGACCCGAGGTCACCGTGAGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGCCACCCTGAGTGCTGTTGCTGGACCCGAGGTCACCGTGAGTTT  889

seq1  AAATTTAACTTGTTGGAATAAGATGGTTAAAGGCACGTGTCTTCCTCAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAACTTGTTGGAATAAGATGGTTAAAGGCACGTGTCTTCCTCAAG  939

seq1  GTCTCTATTGCTGTGATGAGACACCATGACCAAAAGCAAGTTGGGGAGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTATTGCTGTGATGAGACACCATGACCAAAAGCAAGTTGGGGAGAA  989

seq1  AAGGATTTATTTGGCTTACACATCCACATTGAAATCCTTTAGTGAAGAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTTATTTGGCTTACACATCCACATTGAAATCCTTTAGTGAAGAAA  1039

seq1  GCCAGGACAGGAATTC  1066
      ||||||||||||||||
seq2  GCCAGGACAGGAATTC  1055

seq1: chr2_169658794_169659613
seq2: B6Ng01-063J15.g_70_892

seq1  GAATTCCTGCTTTAAACTTCAACCCTTCCTCAGACGGGATTGAGAGGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCTTTAAACTTCAACCCTTCCTCAGACGGGATTGAGAGGGGC  50

seq1  AGTGTGGAGCTTAGGTGCCTTCAAACAGAGAGTGAAATGGTCCCGGTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGAGCTTAGGTGCCTTCAAACAGAGAGTGAAATGGTCCCGGTGTC  100

seq1  TCTGTTTCCCAAAATGTAGCTTTATGTAGTCCCCAAAATGAAATGAGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTCCCAAAATGTAGCTTTATGTAGTCCCCAAAATGAAATGAGGGT  150

seq1  GCGTCAGTGTGCCAGAACGTGACCCGGCGTGCCCCTTCTTTACCCACCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTCAGTGTGCCAGAACGTGACCCGGCGTGCCCCTTCTTTACCCACCAT  200

seq1  TCTCGTTGTTCAGGCACTGAAAGAGCCTGACTTATTTTCTCTTTCTTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGTTGTTCAGGCACTGAAAGAGCCTGACTTATTTTCTCTTTCTTGGA  250

seq1  CAGAGCACAGGAATCTCTCAAACTTTAAATGACCCAGCACCATGAATCGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCACAGGAATCTCTCAAACTTTAAATGACCCAGCACCATGAATCGC  300

seq1  CCCCTAACAGCCTTAGAAGGCAGGAAAACCATTGCCATCCTAATATTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAACAGCCTTAGAAGGCAGGAAAACCATTGCCATCCTAATATTTCA  350

seq1  CAGGAAACACCTTCCCCTCCCACCCACCCACTGCTCTGAGCCAGATTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAACACCTTCCCCTCCCACCCACCCACTGCTCTGAGCCAGATTTAC  400

seq1  ACAGTATACAAAGTGTCTGCAGCCCTAACCGCGGGTGACTCAGGAACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATACAAAGTGTCTGCAGCCCTAACCGCGGGTGACTCAGGAACAGG  450

seq1  GAGCCTGCAGATTAATGTCCTCATCCGCAGTGATGAATTCTACTTTTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGCAGATTAATGTCCTCATCCGCAGTGATGAATTCTACTTTTGTG  500

seq1  TGTGTGTACCGAGAGCAGTGCCAATGGATTGCCGGTAGGCAGGCTCATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTACCGAGAGCAGTGCCAATGGATTGCCGGTAGGCAGGCTCATCT  550

seq1  TCAAGGGTAACTCCGTTCC-AAAAAGGACCGGTGTCAGCCTGTGTTGTAA  599
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCAAGGGTAACTCCGTTCCAAAAAAGGACCGGTGTCAGCCTGTGTTGTAA  600

seq1  GGCAG-TTGCTGCTGTGCAAACCCTGTCCATCACCCACCTCCAGCCTTGC  648
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTTTGCTGCTGTGCAAACCCTGTCCATCACCCACCTCCAGCCTTGC  650

seq1  TAGCACACTCCGTTATTACACTGCTGATCCAA-GGAATGACCCAGGCACT  697
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TAGCACACTCCGTTATTACACTGCTGATCCAAGGGAATGACCCAGGCACT  700

seq1  GACAATGGTGATGAGAGTGGGTCAGCTCTTGGGAGTCATCGGTGACATTA  747
      ||| |||||||||||||||||||||||||| ||||||||| |||||||||
seq2  GAC-ATGGTGATGAGAGTGGGTCAGCTCTTTGGAGTCATCTGTGACATTA  749

seq1  AGAGCCCCCTTCCCTTTCAGGGAGTGAGAGGAATT-CTCTTTTCTCAATA  796
      ||||||||||||||||||||||||||||||||||| |||||||||| |||
seq2  AGAGCCCCCTTCCCTTTCAGGGAGTGAGAGGAATTCCTCTTTTCTCCATA  799

seq1  ATATGTGTGGAGTATCCAGACATG  820
        | ||||||||||||||||||||
seq2  TAAGGTGTGGAGTATCCAGACATG  823