BAC Information

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BAC

Clone NameB6Ng01-064E14
Chromosome2 (Build37)
Map Location 157,233,142 - 157,356,118
singlet/doubletdoublet
Overlap geneSrc
Upstream geneLOC668941, Epb4.1l1, 0610011L14Rik, Dlgap4, Myl9, LOC433546, Tgif2, LOC100043677, 1110008F13Rik, Sla2, LOC100043880, Ndrg3, LOC668943, Dsn1, 9830001H06Rik, Gm1332, Samhd1, Rbl1, LOC100043882, 4922505G16Rik, Rpn2, Ghrh, LOC100043678, Manbal
Downstream geneBlcap, Nnat, Ctnnbl1, LOC100043681, Gm691, 2610036D13Rik, 2610304G08Rik, Tgm2, D630003M21Rik, Bpi, Lbp, 9430008C03Rik, A930034L06Rik, B230339M05Rik, LOC628935, BC054059, LOC545481
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064E14.bB6Ng01-064E14.g
ACCDH884117DH884118
length7991,025
definitionDH884117|Mus musculus domesticus DNA, BAC clone: B6Ng01-064E14, 5' end.DH884118|Mus musculus domesticus DNA, BAC clone: B6Ng01-064E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(157,233,142 - 157,233,941)(157,355,102 - 157,356,118)
sequence
gaattcacagagatcagcctgcctctgcctcctgagtgctggcattaaag
gtgtgcaccagctttctaaactgtttttaactgcacacagtaggtccgct
gtcacagtggctgaggtcctgcttagcttcctgtgtatggagcagcgttg
ctgctcagttagtgctcttggaggacactatccctcgctttgagaggacc
gagatgtctctggggaaggaaatacacacacattcagttcccccagcttc
tgcccaccaaggagaggcgccgtttggaaatccctttctgtccttagaag
tccccagatgggtttcatgatctgtgttttcccgggaactggcaaaggat
gccgtgagtgagtcatcttttgcttggcttgtttcactctgagagcttgg
ggtgctacatgatgaccagtagcctgcctccagaaggcctcccttccccc
acaggctggagcctgcaagttcctggaacagagtagtgggaagttctgga
gaccgtaggggctagcacagctctgaatgaggacccagatgtcacattaa
tggggagggggatgtggaacagggtgtaagaccgtgaaaccatggaccac
accttacagacttctgctagagggaggcctaaagtccttttgtttttctg
tcactgagggactccgtgtttttacacttcaattcttggttctgtttccc
aagtcaaagctgactgaggccattagtaaaaggatgaggagcttgggcac
cggggctgttaaccacaaaacaaaacccttttgctccagacctccttcg
gaattccaataagacagggatggaaaaacacccactggaggtggtaatta
gggggttatcggagcccgcagcaagagtggtttttggggtgtgatggagc
agaagcctgccagcggcgctgcctggggatgacagatagtcagcagcaag
gcagccctgtgcagaagtttagataattaagttcagataattagaaaagt
ttagggcaggattgtctcagagctggagagcgacttgtgaagccaagagg
aagttttcagctcaattctatgcatgatctttgagcctttccagggccta
tggggagaccatgggaagaaaacagatctctgtcctcgtggggtttctaa
tccagaaggagagacagaccctgggtaaattgtcagaacaaatggcgatc
atgaacaggggaaggagtctgctgaggtttccctgggtgctgctgagaga
tgaaggtggtgcgcaggcgaggagggttcggggcagcatgggtcatctag
ctcagaaggtttgcagctttgtcccaaagcacgatgatgacatgtcctga
ctcatgagttgaaactctccctctggcttctggtgaggagatcaccgtgg
gagcagaggtcagcagggagggaggtcttccagtggacaacctgctgtcc
atcacccagacctggcgcatgaacatgagagaaggaacagaaaaaaaagg
ctggggcacctgtgggagctcggggctttggatggatgaggtggaaagga
ccagttgctagaaggaagtcccctggcatcactggccagtgctgtggttc
cacatgaagagagaccttgactggggacaaagagtgttggttggatttat
tgaagtatgagaggactttgggacttgtagcttaggggccaggagggaag
actcaggtatagacagaatgctcaaagaggtcacattgagacagcaaggt
gcattataagtgcaatatgcagccgggcgttggggccacacctttatcca
gcattcagaaagaaatgcaggctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_157233142_157233941
seq2: B6Ng01-064E14.b_49_846

seq1  GAATTCACAGAGATCAGCCTGCCTCTGCCTCCTGAGTGCTGGCATTAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGAGATCAGCCTGCCTCTGCCTCCTGAGTGCTGGCATTAAAG  50

seq1  GTGTGCACCAGCTTTCTAAACTGTTTTTAACTGCACACAGTAGGTCCGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCACCAGCTTTCTAAACTGTTTTTAACTGCACACAGTAGGTCCGCT  100

seq1  GTCACAGTGGCTGAGGTCCTGCTTAGCTTCCTGTGTATGGAGCAGCGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGTGGCTGAGGTCCTGCTTAGCTTCCTGTGTATGGAGCAGCGTTG  150

seq1  CTGCTCAGTTAGTGCTCTTGGAGGACACTATCCCTCGCTTTGAGAGGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCAGTTAGTGCTCTTGGAGGACACTATCCCTCGCTTTGAGAGGACC  200

seq1  GAGATGTCTCTGGGGAAGGAAATACACACACATTCAGTTCCCCCAGCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTCTCTGGGGAAGGAAATACACACACATTCAGTTCCCCCAGCTTC  250

seq1  TGCCCACCAAGGAGAGGCGCCGTTTGGAAATCCCTTTCTGTCCTTAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACCAAGGAGAGGCGCCGTTTGGAAATCCCTTTCTGTCCTTAGAAG  300

seq1  TCCCCAGATGGGTTTCATGATCTGTGTTTTCCCGGGAACTGGCAAAGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGATGGGTTTCATGATCTGTGTTTTCCCGGGAACTGGCAAAGGAT  350

seq1  GCCGTGAGTGAGTCATCTTTTGCTTGGCTTGTTTCACTCTGAGAGCTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTGAGTGAGTCATCTTTTGCTTGGCTTGTTTCACTCTGAGAGCTTGG  400

seq1  GGTGCTACATGATGACCAGTAGCCTGCCTCCAGAAGGCCTCCCTTCCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTACATGATGACCAGTAGCCTGCCTCCAGAAGGCCTCCCTTCCCCC  450

seq1  ACAGGCTGGAGCCTGCAAGTTCCTGGAACAGAGTAGTGGGAAGTTCTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTGGAGCCTGCAAGTTCCTGGAACAGAGTAGTGGGAAGTTCTGGA  500

seq1  GACCGTAGGGGCTAGCACAGCTCTGAATGAGGACCCAGATGTCACATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCGTAGGGGCTAGCACAGCTCTGAATGAGGACCCAGATGTCACATTAA  550

seq1  TGGGGAGGGGGATGTGGAACAGGGTGTAAGACCGTGAAACCATGGACCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGGGGGATGTGGAACAGGGTGTAAGACCGTGAAACCATGGACCAC  600

seq1  ACCTTACAGACTTCTGCTAGAGGGAGGCCTAAAGTCCTTTTGTTTTTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTACAGACTTCTGCTAGAGGGAGGCCTAAAGTCCTTTTGTTTTTCTG  650

seq1  TCACTGAGGGACTCCGTGTTTTTACACTTCAATTCTT-GTTCTGTTTCCC  699
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCACTGAGGGACTCCGTGTTTTTACACTTCAATTCTTGGTTCTGTTTCCC  700

seq1  AAGTCAGAGGCTGACTGAGGCCATTAGTAAAAGGATGAGGAGCTTGGGCA  749
      |||||| | |||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCA-AAGCTGACTGAGGCCATTAGTAAAAGGATGAGGAGCTTGGGCA  749

seq1  CCGGGGCTGTTAAACCACACAACAAAGCCCTTTTGCTCCCAGACCTCCTT  799
      ||||||||||| ||||||| |||||| |||||||||| ||||||||||||
seq2  CCGGGGCTGTT-AACCACAAAACAAAACCCTTTTGCT-CCAGACCTCCTT  797

seq1  C  800
      |
seq2  C  798

seq1: chr2_157355102_157356118
seq2: B6Ng01-064E14.g_67_1074 (reverse)

seq1  CTGAGTGCTGGGATTAAAGGTGTGTGCCACAACGCCCGGCTGCATATTGC  50
      |||| ||||||   |||||||||| ||| |||||||||||||||||||||
seq2  CTGAATGCTGG--ATAAAGGTGTG-GCCCCAACGCCCGGCTGCATATTGC  47

seq1  ACTTCTTAATGCCACCCTGCCTGTCTCACTGTGACCTTCTCTGAAGCCTT  100
      ||||  ||||| |||| || |||||||| ||||||| ||| || ||| ||
seq2  ACTT-ATAATG-CACCTTG-CTGTCTCAATGTGACC-TCTTTG-AGCATT  92

seq1  CTGTCTCTACCTGAGTCTTCCCTCCTGGCCCCTAAGCTACAAGTCCCAAA  150
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTATACCTGAGTCTTCCCTCCTGGCCCCTAAGCTACAAGTCCCAAA  142

seq1  GTCCTCTCATAC-TCAATAAATTCAACCAACAACTCTTTGTCCCCAGTCA  199
      |||||||||||| ||||||||| |||||||| ||||||||||||||||||
seq2  GTCCTCTCATACTTCAATAAATCCAACCAAC-ACTCTTTGTCCCCAGTCA  191

seq1  AGGTCTCTCTTCATGTGGAACCACAGCACTGGCCAGTGGATGCCAGGGGA  249
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGGTCTCTCTTCATGTGGAACCACAGCACTGGCCAGT-GATGCCAGGGGA  240

seq1  CTTCC-TCTAGCAACTGGTCCTTCCCACCTCATCCATTCCAAAGCCCCGA  298
      ||||| ||||||||||||||||| |||||||||||| |||||||||||||
seq2  CTTCCTTCTAGCAACTGGTCCTTTCCACCTCATCCA-TCCAAAGCCCCGA  289

seq1  GCTCCCACAGGTGCCCCAGCCTTTTTTTTCTGTTCCTTCTCTCATGTTCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCACAGGTGCCCCAGCCTTTTTTTTCTGTTCCTTCTCTCATGTTCA  339

seq1  TGCGCCAGGTCTGGGTGATGGACAGCAGGTTGTCCACTGGAAGACCTCCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCCAGGTCTGGGTGATGGACAGCAGGTTGTCCACTGGAAGACCTCCC  389

seq1  TCCCTGCTGACCTCTGCTCCCACGGTGATCTCCTCACCAGAAGCCAGAGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCTGACCTCTGCTCCCACGGTGATCTCCTCACCAGAAGCCAGAGG  439

seq1  GAGAGTTTCAACTCATGAGTCAGGACATGTCATCATCGTGCTTTGGGACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTTCAACTCATGAGTCAGGACATGTCATCATCGTGCTTTGGGACA  489

seq1  AAGCTGCAAACCTTCTGAGCTAGATGACCCATGCTGCCCCGAACCCTCCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCAAACCTTCTGAGCTAGATGACCCATGCTGCCCCGAACCCTCCT  539

seq1  CGCCTGCGCACCACCTTCATCTCTCAGCAGCACCCAGGGAAACCTCAGCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTGCGCACCACCTTCATCTCTCAGCAGCACCCAGGGAAACCTCAGCA  589

seq1  GACTCCTTCCCCTGTTCATGATCGCCATTTGTTCTGACAATTTACCCAGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCTTCCCCTGTTCATGATCGCCATTTGTTCTGACAATTTACCCAGG  639

seq1  GTCTGTCTCTCCTTCTGGATTAGAAACCCCACGAGGACAGAGATCTGTTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTCTCCTTCTGGATTAGAAACCCCACGAGGACAGAGATCTGTTT  689

seq1  TCTTCCCATGGTCTCCCCATAGGCCCTGGAAAGGCTCAAAGATCATGCAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCATGGTCTCCCCATAGGCCCTGGAAAGGCTCAAAGATCATGCAT  739

seq1  AGAATTGAGCTGAAAACTTCCTCTTGGCTTCACAAGTCGCTCTCCAGCTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGAGCTGAAAACTTCCTCTTGGCTTCACAAGTCGCTCTCCAGCTC  789

seq1  TGAGACAATCCTGCCCTAAACTTTTCTAATTATCTGAACTTAATTATCTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAATCCTGCCCTAAACTTTTCTAATTATCTGAACTTAATTATCTA  839

seq1  AACTTCTGCACAGGGCTGCCTTGCTGCTGACTATCTGTCATCCCCAGGCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTGCACAGGGCTGCCTTGCTGCTGACTATCTGTCATCCCCAGGCA  889

seq1  GCGCCGCTGGCAGGCTTCTGCTCCATCACACCCCAAAAACCACTCTTGCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCGCTGGCAGGCTTCTGCTCCATCACACCCCAAAAACCACTCTTGCT  939

seq1  GCGGGCTCCGATAACCCCCTAATTACCACCTCCAGTGGGTGTTTTTCCAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGCTCCGATAACCCCCTAATTACCACCTCCAGTGGGTGTTTTTCCAT  989

seq1  CCCTGTCTTATTGGAATTC  1017
      |||||||||||||||||||
seq2  CCCTGTCTTATTGGAATTC  1008