BAC Information

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BAC

Clone NameB6Ng01-064I03
Chromosome2 (Build37)
Map Location 160,194,319 - 160,321,217
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043689, Gm826, Mafb
Downstream geneLOC100043892, Top1, Plcg1, Zhx3, Lpin3, Emilin3, Chd6, LOC100043693, LOC100043694, LOC383769, LOC629655, LOC383770
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064I03.bB6Ng01-064I03.g
ACCDH884275DH884276
length1,2001,019
definitionDH884275|Mus musculus domesticus DNA, BAC clone: B6Ng01-064I03, 5' end.DH884276|Mus musculus domesticus DNA, BAC clone: B6Ng01-064I03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(160,320,000 - 160,321,217)(160,194,319 - 160,195,347)
sequence
gaattctgctccaagtcagggcagcaggtgccggcagaaaccattagcag
gacagccaggttggctagggaacgctgtttgtacctactgcaaggtgaac
gttgtccaatccacagcaggcacggggacaatgggactgttggctactag
ggtcaggcaatattggtggtaggcagccttatggaactggggcctgggag
aaggcttggcatttggagggatgctggcctgtccccattctgcttgccca
atctgtaggagctgcccatctgtcagagactcagactgtcaggcaagctg
gtgaggggcctacaggcaagggaggcttctctgacaggggagtccttcac
tgtcagcagcttcgcctcagtgggttaataaagccatccatcacctgctt
catgccaggtatctaaatgcctgcttaataccaccctggggagtgagtct
gtactgggggtgctcacccggccggggtacaggggtgggaggaacttagt
ctgggggtttgcagttgtccagatgtgaacccagtccagaatctatctcc
cttcacccagctggcttgaatctctgcagtctgacaacacagtgcacaat
tagaacagagacaccaaggtgcttcaggttggtgtattccagttagacta
cagacatcttgctaggcaagaacttactaagcgcactatatcacatgaac
ttgctacaaactcctctccccactgctcagacggaaagactaaggtcagg
gactctgaaccacttgcgatcatggagccggggaacacaggaccaccaga
ctcgggcgaatccgttgctcttgactgtgatgttttttcctgggccaggt
gctttcatagttctaaactttcagagctgcgagattcagaagaagctcag
agtggtaacagtgggctgtacaaggacacacagcaggaagctcagagctg
ggactcagcccaggtcatgttgaccccaaatctgtgtgctattacttttt
tcttgcaagaatagtatgtcttcattggctcttcttccacaaaccatcct
tctaaaaaataaactcctgaattggaccttatgtacagcagggaaggggg
tttagctgtcctgtagctggcctcctttctgctccatatggtgaagcctt
acagcccctcttgtgggagcctatcacgccctctatgacctctgcaggtt

ctggatccggagatccgacccggctcccacgtcgctttttgcttcccagc
tcaggacgcggaaagatgagcgtcagaaagcgcgctgggtgagtgtgtcc
tagctgctggctgcacaggacctgccctccaacaccgcgcacggggggct
agtgacccgcagcattgacaaccagaccagaccttttccccccttttaac
agaaagaaaaatttgcttccaatcaataagaaaagcctttccccccttct
taaatccttagggaaggcggggtagagactggtcacaggagcctaatttt
aaccaaatgggtgtattttaactaaaacttcacctaaaaggtttagatca
gtgaactgctggggaaatctcgagccctttggagaagtgcgctctcggca
gaaatgattcgactgcctaggtagagagccagggcggttaggctgaacct
cccacagatgagatgggcgatgaggacacagactctcgcctaagagtcgc
agctgcggtcctgcgaggagagcgcgctctcggacctcggctcagccagg
ggacgttgagaccatcaggtttagagttccgggtctctgcaaaccggggt
ttcaggctcgaccaccacacgcatactctcttaacactcatggggctcca
gctttaacctcgccccactccccccacccccagtcatccgagacgcagcg
cttcccgagtacgcgcctcactgcaaaccctcctgggaacaccggggagg
gcagcagagcagggcttgctcccgcgtgtctctgtcatcacggagggctc
aaaccccacttctcaagaatgtggcccttgaagaggactcttgtggccca
gaccagtaattgtaaactccagaagaagcgctactctctcagcttggggg
actcggcctttgtcccggccgttttctctctttgtcccgtgactatctct
gttgtaaccactctcttctctgagcttagatgggctatcttagcgtctct
agttcactttcccaccccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_160320000_160321217
seq2: B6Ng01-064I03.b_46_1245 (reverse)

seq1  AACCTGCAAGAGGTCATAGGTGAGCTGTGTTTAGGCCTCCACATATGAGG  50
      ||||||| |||||||||| | | || |||  |||||  |||||   | ||
seq2  AACCTGC-AGAGGTCATA-GAGGGC-GTG-ATAGGCTCCCACAAGAGGGG  46

seq1  CTGTGTTTAGGCCTCCACATATGAGGCAGTAAGAGAGGCAGGCTTACCAG  100
      |||   | |||| ||  ||||||  |||| ||| |||||  |||   |||
seq2  CTG---TAAGGCTTCACCATATGGAGCAGAAAG-GAGGCCAGCT--ACAG  90

seq1  AACAGGCTTAACCCCCCTCACCTGCTCGTTACATCAGAGTCCCACATCA-  149
       ||| ||| ||||||| || ||||||   ||||| || || |||  ||| 
seq2  GACA-GCTAAACCCCCTTC-CCTGCT--GTACATAAG-GT-CCAATTCAG  134

seq1  GAGTTTATTTTTTAAGAAGGATGGTTTGTGGCAGAAGAG-CATTGAAGAC  198
      ||||||||||||| ||||||||||||||||| ||||||| || |||||||
seq2  GAGTTTATTTTTT-AGAAGGATGGTTTGTGGAAGAAGAGCCAATGAAGAC  183

seq1  ATACTATTCTGGC-AGAAAATAGTAATAGCAACACAGATTTGGGGTCACA  247
      |||||||||| || |||||| ||||||||| |||||||||||||||||  
seq2  ATACTATTCTTGCAAGAAAAAAGTAATAGC-ACACAGATTTGGGGTCAAC  232

seq1  ATGACCTGGGCTGAGTCCCAGCTCTGAGCTTCCTGGCTGTGTGTCCTTGT  297
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATGACCTGGGCTGAGTCCCAGCTCTGAGCTTCCT-GCTGTGTGTCCTTGT  281

seq1  ACAGCCCACTGTTACCACTCTGAGCTTCCTTCTGAATCTCGCAGCTCTGA  347
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACAGCCCACTGTTACCACTCTGAGCTT-CTTCTGAATCTCGCAGCTCTGA  330

seq1  AAGTTTTAGAACTATGAAAGCACCTGGCCCAGGAAAAAACATCACAGTCA  397
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAG-TTTAGAACTATGAAAGCACCTGGCCCAGGAAAAAACATCACAGTCA  379

seq1  AGAGCAACGGATTCGCCCGAGTCTGGTGGTCCTGTGTTCCCCGGCTCCAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAACGGATTCGCCCGAGTCTGGTGGTCCTGTGTTCCCCGGCTCCAT  429

seq1  GATCGCAAGTGGTTCAGAGTCCCTGACCTTAGTCTTTCCGTCTGAGCAGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCGCAAGTGGTTCAGAGTCCCTGACCTTAGTCTTTCCGTCTGAGCAGT  479

seq1  GGGGAGAGGAGTTTGTAGCAAGTTCATGTGATATAGTGCGCTTAGTAAGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGAGGAGTTTGTAGCAAGTTCATGTGATATAGTGCGCTTAGTAAGT  529

seq1  TCTTGCCTAGCAAGATGTCTGTAGTCTAACTGGAATACACCAACCTGAAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCTAGCAAGATGTCTGTAGTCTAACTGGAATACACCAACCTGAAG  579

seq1  CACCTTGGTGTCTCTGTTCTAATTGTGCACTGTGTTGTCAGACTGCAGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTGGTGTCTCTGTTCTAATTGTGCACTGTGTTGTCAGACTGCAGAG  629

seq1  ATTCAAGCCAGCTGGGTGAAGGGAGATAGATTCTGGACTGGGTTCACATC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGCCAGCTGGGTGAAGGGAGATAGATTCTGGACTGGGTTCACATC  679

seq1  TGGACAACTGCAAACCCCCAGACTAAGTTCCTCCCACCCCTGTACCCCGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAACTGCAAACCCCCAGACTAAGTTCCTCCCACCCCTGTACCCCGG  729

seq1  CCGGGTGAGCACCCCCAGTACAGACTCACTCCCCAGGGTGGTATTAAGCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGTGAGCACCCCCAGTACAGACTCACTCCCCAGGGTGGTATTAAGCA  779

seq1  GGCATTTAGATACCTGGCATGAAGCAGGTGATGGATGGCTTTATTAACCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTAGATACCTGGCATGAAGCAGGTGATGGATGGCTTTATTAACCC  829

seq1  ACTGAGGCGAAGCTGCTGACAGTGAAGGACTCCCCTGTCAGAGAAGCCTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGCGAAGCTGCTGACAGTGAAGGACTCCCCTGTCAGAGAAGCCTC  879

seq1  CCTTGCCTGTAGGCCCCTCACCAGCTTGCCTGACAGTCTGAGTCTCTGAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCCTGTAGGCCCCTCACCAGCTTGCCTGACAGTCTGAGTCTCTGAC  929

seq1  AGATGGGCAGCTCCTACAGATTGGGCAAGCAGAATGGGGACAGGCCAGCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGCAGCTCCTACAGATTGGGCAAGCAGAATGGGGACAGGCCAGCA  979

seq1  TCCCTCCAAATGCCAAGCCTTCTCCCAGGCCCCAGTTCCATAAGGCTGCC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCAAATGCCAAGCCTTCTCCCAGGCCCCAGTTCCATAAGGCTGCC  1029

seq1  TACCACCAATATTGCCTGACCCTAGTAGCCAACAGTCCCATTGTCCCCGT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACCAATATTGCCTGACCCTAGTAGCCAACAGTCCCATTGTCCCCGT  1079

seq1  GCCTGCTGTGGATTGGACAACGTTCACCTTGCAGTAGGTACAAACAGCGT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTGTGGATTGGACAACGTTCACCTTGCAGTAGGTACAAACAGCGT  1129

seq1  TCCCTAGCCAACCTGGCTGTCCTGCTAATGGTTTCTGCCGGCACCTGCTG  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAGCCAACCTGGCTGTCCTGCTAATGGTTTCTGCCGGCACCTGCTG  1179

seq1  CCCTGACTTGGAGCAGAATTC  1218
      |||||||||||||||||||||
seq2  CCCTGACTTGGAGCAGAATTC  1200

seq1: chr2_160194319_160195347
seq2: B6Ng01-064I03.g_75_1093

seq1  CTGGATCCGGAGATCCGACCCGGCTCCCACGTCGCTTTTTGCTTCCCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATCCGGAGATCCGACCCGGCTCCCACGTCGCTTTTTGCTTCCCAGC  50

seq1  TCAGGACGCGGAAAGATGAGCGTCAGAAAGCGCGCTGGGTGAGTGTGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACGCGGAAAGATGAGCGTCAGAAAGCGCGCTGGGTGAGTGTGTCC  100

seq1  TAGCTGCTGGCTGCACAGGACCTGCCCTCCAACACCGCGCACGGGGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGCTGGCTGCACAGGACCTGCCCTCCAACACCGCGCACGGGGGGCT  150

seq1  AGTGACCCGCAGCATTGACAACCAGACCAGACCTTTTCCCCCCTTTTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACCCGCAGCATTGACAACCAGACCAGACCTTTTCCCCCCTTTTAAC  200

seq1  AGAAAGAAAAATTTGCTTCCAATCAATAAGAAAAGCCTTTCCCCCCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAAATTTGCTTCCAATCAATAAGAAAAGCCTTTCCCCCCTTCT  250

seq1  TAAATCCTTAGGGAAGGCGGGGTAGAGACTGGTCACAGGAGCCTAATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCTTAGGGAAGGCGGGGTAGAGACTGGTCACAGGAGCCTAATTTT  300

seq1  AACCAAATGGGTGTATTTTAACTAAAACTTCACCTAAAAGGTTTAGATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAATGGGTGTATTTTAACTAAAACTTCACCTAAAAGGTTTAGATCA  350

seq1  GTGAACTGCTGGGGAAATCTCGAGCCCTTTGGAGAAGTGCGCTCTCGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACTGCTGGGGAAATCTCGAGCCCTTTGGAGAAGTGCGCTCTCGGCA  400

seq1  GAAATGATTCGACTGCCTAGGTAGAGAGCCAGGGCGGTTAGGCTGAACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGATTCGACTGCCTAGGTAGAGAGCCAGGGCGGTTAGGCTGAACCT  450

seq1  CCCACAGATGAGATGGGCGATGAGGACACAGACTCTCGCCTAAGAGTCGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGATGAGATGGGCGATGAGGACACAGACTCTCGCCTAAGAGTCGC  500

seq1  AGCTGCGGTCCTGCGAGGAGAGCGCGCTCTCGGACCTCGGCTCAGCCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCGGTCCTGCGAGGAGAGCGCGCTCTCGGACCTCGGCTCAGCCAGG  550

seq1  GGACGTTGAGACCATCAGGTTTAGAGTTCCGGGTCTCTGCAAACCGGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGTTGAGACCATCAGGTTTAGAGTTCCGGGTCTCTGCAAACCGGGGT  600

seq1  TTCAGGCTCGACCACCACACGCATACTCTCTTAACACTCATGGGGCTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGCTCGACCACCACACGCATACTCTCTTAACACTCATGGGGCTCCA  650

seq1  GCTTTAACCTCGCCCCACTCCCCCCACCCCCAGTCATCCGAGACGCAGCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAACCTCGCCCCACTCCCCCCACCCCCAGTCATCCGAGACGCAGCG  700

seq1  CTTCCCGAGTACGCGCCTCACTGCAAACCCTCCTGGGAACACCGGGGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCGAGTACGCGCCTCACTGCAAACCCTCCTGGGAACACCGGGGAGG  750

seq1  GCAGCAGAGCAGGGCTTGCTCCCGCGTGTCTCTGTCATCACGGAGGGCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGAGCAGGGCTTGCTCCCGCGTGTCTCTGTCATCACGGAGGGCTC  800

seq1  AAACCCCACTTCTCAAGAATGTGGCCCTTGAAGAGGACTCTTGTGGCCCC  850
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACCCCACTTCTCAAGAATGTGGCCCTTGAAGAGGACTCTTGTGG-CCC  849

seq1  AGACCAGTAATTGTAAAACTCCAGAAGAAGCGCTACTCTCTCAGGCTTGG  900
      |||||||||||||| |||||||||||||||||||||||||||| ||||||
seq2  AGACCAGTAATTGT-AAACTCCAGAAGAAGCGCTACTCTCTCA-GCTTGG  897

seq1  GGGACTCGGCCTTTGTCCCGGCCGTTTTTCTCCTCTTTGTCCCCGTGACT  950
      |||||||||||||||||||||||| |||||| |||||||| |||||||||
seq2  GGGACTCGGCCTTTGTCCCGGCCG-TTTTCT-CTCTTTGT-CCCGTGACT  944

seq1  ATCTCTGTTGTAACCACTCTCTTCCTCTGAGCTTTAGATGAGCTATCTCA  1000
      ||||||||||||||||||||||| |||||||| ||||||| ||||||| |
seq2  ATCTCTGTTGTAACCACTCTCTT-CTCTGAGC-TTAGATGGGCTATCTTA  992

seq1  GCGTCTCCTAGGTTCACTTTCCCACCCCC  1029
      |||||| ||| ||||||||||||||||||
seq2  GCGTCT-CTA-GTTCACTTTCCCACCCCC  1019