BAC Information

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BAC

Clone NameB6Ng01-064M07
Chromosome2 (Build37)
Map Location 40,660,846 - 40,661,951
singlet/doubletsinglet
Overlap geneLrp1b
Upstream geneLOC100042604, Magmas-ps, LOC666531
Downstream geneLOC100042629
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064M07.bB6Ng01-064M07.g
ACCDH884455DH884456
length1,093739
definitionDH884455|Mus musculus domesticus DNA, BAC clone: B6Ng01-064M07, 5' end.DH884456|Mus musculus domesticus DNA, BAC clone: B6Ng01-064M07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtcattacaagttcacattgcatcccaaacacacatgttaa
catcacactagtttccagatacactgtttttcaaaattttaaagatttat
tcatatttattttgtacatggaaattttgtctacatgtgtgtctgtatac
cacaaacagacagtgcctgtggtggcccaaagtggacattgaatcccttg
gagtcacagaggttgtgagctgccatgtgactgctagtgactaaatctag
gtcctcagaaggaacaaccactattcctaacctctgagatcaggccccca
gttgtctattaaatattcatttaaactctgtaactattttcttggaaggt
ttgtttgtataaaaacagaaaaaatattaaagaaaattgtatgtgaacag
gaaacaaaagtgaaatgaatatgtatatttagtacagttcaacattgaat
gcagttaacaaactttactgatgaaagtttttagaatttctttttattaa
ggaagtaaaatatatatagagatttgctttttataaaatttacatttttc
ataattaagagtgaaatatgtttcctgaatcaagtttcaaatttcagtta
tgtattattccccaatttgagctaataaaaaggctagggctgaagagata
gctcagccattttaaaagttggctcacaaccaaaattatgagcctagtat
taaactaccagtcagtaataaataatccatgagaatcatggatccaaaaa
tagtgctttattgtgagtaatatgaatcgtgtgacattttctgagtcaaa
tctagatctgaaacttaggactgcatctgaaaaactatacctcttggggt
gaattaataataacaataatgcttagtttcccaatgtttaaatggtcata
atgatagtcctgtgaaaggctataatataaataaagtcggcatggataag
tctaccttagcacttaacacaaactagatctcagtagatctctgtaattg
atactattccttaatataccgagggatatttcagagaaaataccacagtg
taattggtgtatatatatggaaataaatgtaaacttactatat

gaattcaaattcatacattcttagtgtcttgtacaaagatcaagtccaag
tggatcaaggacatccacataaaaccagatatgctgaatctaatagaaga
gaaagtggaaagatcttcaaaaacattagcacgggtaaaattttcctgaa
cagaacaccaagggctctaagttcaattgtagacaaatgggattgcaaag
gcaaaagacactgccaataggcaaaacagcaacctacagattaggaaaag
attgttacccacctatatccgatgaagggctaatatctaatatatacaaa
gaactcaagaagctagattccagagaaccaattaactctatttttaagag
atgtatagagctaaacaaagaattctcaactgaggaatcttgaatggctg
aaaagcaactaaatatagctgtctcttgtgagactatgccggggcctagc
aaacacagaagtggatgctcacagtcagctattggatgggtcacacggcc
cccaatggaggaactagaaaaagtacccaaggagctaaagggaactgcaa
ccctatatgtggaacaacaatatgaactaaccagtaccccggagttcttg
tctctagctgcatatgtatcaaaagatggcctagtcagccatcactggaa
agagaggccctttggacttgcaaactttatatgccccagtacaggggaac
gccagggccaaaaagggggagtgggtgggtaggggattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_40660846_40661951
seq2: B6Ng01-064M07.b_46_1138 (reverse)

seq1  ATATAGTAAGTATTTACATATTATTTTCATTATTATA-ATACACAATTTA  49
      ||||||||||  ||||||| |||||| ||    |||| |||||| | |||
seq2  ATATAGTAAG--TTTACAT-TTATTTCCA----TATATATACACCAATTA  43

seq1  CACTTGGTGGTATTTTCTCTTGAAATATTCCCTCGGTATATATAAGGAAT  99
      ||||  ||||||||||||| ||||||| ||||||||||||| ||||||||
seq2  CACT--GTGGTATTTTCTC-TGAAATA-TCCCTCGGTATAT-TAAGGAAT  88

seq1  AGTATCAAATACAGAAGATCTACTGAGATCTAGTTTGTGTTAAGTGCTAA  149
      |||||||| ||||| |||||||||||||||||||||||||||||||||||
seq2  AGTATCAATTACAG-AGATCTACTGAGATCTAGTTTGTGTTAAGTGCTAA  137

seq1  GGTAGACTTATCCATGCCGACTTTTATTTATATTATAGCCTTTCACAGGA  199
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGTAGACTTATCCATGCCGAC-TTTATTTATATTATAGCCTTTCACAGGA  186

seq1  CTATCATTATGACCATTTAAACATTGGGAAACTAAGCATTATTGTTATTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATTATGACCATTTAAACATTGGGAAACTAAGCATTATTGTTATTA  236

seq1  TTAATTCACCCCAAGAGGTATAGTTTTTCAGATGCAGTCCTAAGTTTCAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCACCCCAAGAGGTATAGTTTTTCAGATGCAGTCCTAAGTTTCAG  286

seq1  ATCTAGATTTGACTCAGAAAATGTCACACGATTCATATTACTCACAATAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGATTTGACTCAGAAAATGTCACACGATTCATATTACTCACAATAA  336

seq1  AGCACTATTTTTGGATCCATGATTCTCATGGATTATTTATTACTGACTGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTATTTTTGGATCCATGATTCTCATGGATTATTTATTACTGACTGG  386

seq1  TAGTTTAATACTAGGCTCATAATTTTGGTTGTGAGCCAACTTTTAAAATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTAATACTAGGCTCATAATTTTGGTTGTGAGCCAACTTTTAAAATG  436

seq1  GCTGAGCTATCTCTTCAGCCCTAGCCTTTTTATTAGCTCAAATTGGGGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCTATCTCTTCAGCCCTAGCCTTTTTATTAGCTCAAATTGGGGAA  486

seq1  TAATACATAACTGAAATTTGAAACTTGATTCAGGAAACATATTTCACTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACATAACTGAAATTTGAAACTTGATTCAGGAAACATATTTCACTCT  536

seq1  TAATTATGAAAAATGTAAATTTTATAAAAAGCAAATCTCTATATATATTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATGAAAAATGTAAATTTTATAAAAAGCAAATCTCTATATATATTT  586

seq1  TACTTCCTTAATAAAAAGAAATTCTAAAAACTTTCATCAGTAAAGTTTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCTTAATAAAAAGAAATTCTAAAAACTTTCATCAGTAAAGTTTGT  636

seq1  TAACTGCATTCAATGTTGAACTGTACTAAATATACATATTCATTTCACTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGCATTCAATGTTGAACTGTACTAAATATACATATTCATTTCACTT  686

seq1  TTGTTTCCTGTTCACATACAATTTTCTTTAATATTTTTTCTGTTTTTATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCCTGTTCACATACAATTTTCTTTAATATTTTTTCTGTTTTTATA  736

seq1  CAAACAAACCTTCCAAGAAAATAGTTACAGAGTTTAAATGAATATTTAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACCTTCCAAGAAAATAGTTACAGAGTTTAAATGAATATTTAAT  786

seq1  AGACAACTGGGGGCCTGATCTCAGAGGTTAGGAATAGTGGTTGTTCCTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAACTGGGGGCCTGATCTCAGAGGTTAGGAATAGTGGTTGTTCCTTC  836

seq1  TGAGGACCTAGATTTAGTCACTAGCAGTCACATGGCAGCTCACAACCTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGACCTAGATTTAGTCACTAGCAGTCACATGGCAGCTCACAACCTCT  886

seq1  GTGACTCCAAGGGATTCAATGTCCACTTTGGGCCACCACAGGCACTGTCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTCCAAGGGATTCAATGTCCACTTTGGGCCACCACAGGCACTGTCT  936

seq1  GTTTGTGGTATACAGACACACATGTAGACAAAATTTCCATGTACAAAATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGGTATACAGACACACATGTAGACAAAATTTCCATGTACAAAATA  986

seq1  AATATGAATAAATCTTTAAAATTTTGAAAAACAGTGTATCTGGAAACTAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAATAAATCTTTAAAATTTTGAAAAACAGTGTATCTGGAAACTAG  1036

seq1  TGTGATGTTAACATGTGTGTTTGGGATGCAATGTGAACTTGTAATGACAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGTTAACATGTGTGTTTGGGATGCAATGTGAACTTGTAATGACAA  1086

seq1  AGAATTC  1106
      |||||||
seq2  AGAATTC  1093


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