BAC Information

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BAC

Clone NameB6Ng01-065H11
Chromosome2 (Build37)
Map Location 88,660,814 - 88,787,550
singlet/doubletdoublet
Overlap geneOlfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211
Upstream geneOlfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202
Downstream geneOlfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924, Olfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065H11.bB6Ng01-065H11.g
ACCDH884934DH884935
length1,003963
definitionDH884934|Mus musculus domesticus DNA, BAC clone: B6Ng01-065H11, 5' end.DH884935|Mus musculus domesticus DNA, BAC clone: B6Ng01-065H11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,786,961 - 88,787,550)(88,660,814 - 88,661,696)
sequence
gaattcaaacataacaatttattttgtttaaggcaggatctcattgtata
tctctggttactctgaattatctttctctgttgttttcctgtgtgttgaa
aaggtaggcataggactccttgaactgacatcaatttgtcttttacagaa
ggttcagaagggagtatatcaagtaggggttatatgaaatataaatgaat
tttctcagcttctgaacatatattttttaaataaaaacttgtaggaaaaa
atccatcacagtgtttagaattgaagaattttaaatgatatatctcactc
ttgagtgacagacaaaatttttcatattgttttcctttttaaaaattgga
tatttttttatttgcattttaaatgttatccactttcctgcctctcccca
aaaatcttcctatctcatccctcctctcctgcttctatgagggtgtttcc
ctatccacccatccactcctaccttcctgctcttttttaccctacactgg
ggaatcgagccttcacaggaccaagggcctctcttcccattgatgcagaa
caagggcatcctctcctacatactcagatggagccatgggtctctccatt
tgtactccttcattggtggtttagtccctggaatcttgggggggggggcg
ttctggctggttgatattattgttctttcctatgggattgcaaactcttt
tagctccttcagtccttctccaactcctttattgaggacccaatggggac
cctatgctcagtccaatggtttgttatgagcatccatctctgtatttttc
aagctctggaagcacctctcaggagatagctatatcaggctcccttcaac
atgtacttcttagcatccacaatagtgtcttggtttggtgactgtatatg
gcatggatctccagtggggcactcttaagttacagttcaagcttgcaagg
atgtgagcaatgagaacacttctccatgatgatgggaatccactttgaaa
tca
gaattctcattgggttatgaaactacttttaacttaggagttttatcaat
atgtgaaataaaatttatgtaaaccatctggaatttctttctttcctcaa
atattttttcctttttatgaactattaaaattgcacatagctttgagtta
aaatttaaaattatgatacagacaagaaggttgataaataagcatataca
tgataaataggcaaacagaagatgacacatgatagctgaaaacatattaa
ccattttaaaatctatgatgtagccagtaaaatcttcatggtaaacatcc
cataccttcttctaaaatctagaaagagaactgtcatcttctctaggaac
ctcaatcaattatgggagattatgttaagtcttcatgatctacctggctg
tcactgtatcagtaccatgcagggttttttttttttggtttgtttgtttg
gttttttttttttttcataattgctgtgtaatacagctttaggtcaggca
tggtgattccatcagaggttcttttattgttgagaatagtttttgctatc
ctatggtttttgttattctagatgaatttgcaaattaccctttgtaactg
tgaagaattgagttggaattttttatggggattgcattgaatctgtagat
tgctttcagcaagatggccatttttactatatcagtcctgtcaatcaata
agcatgggagatctttccatcttctgagatcatctttgatttctttcttc
agagacttgaagttcttatcatacagatctttcacttccttagttagagt
cacacaaggtattttatattatttgtgactatgatgaagggtgttggttg
cctatttcttcctcagcctgtttatctttgtgtagaagaagggcactgat
ttatttaagttattcttatctagctactgcattgaagtgtttatcatgat
taggagtccctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_88786961_88787550
seq2: B6Ng01-065H11.b_45_634 (reverse)

seq1  CCCATGGCTCCATCTGAGTATGTAGGAGAGGATGCCCTTGTTCTGCATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGCTCCATCTGAGTATGTAGGAGAGGATGCCCTTGTTCTGCATCA  50

seq1  ATGGGAAGAGAGGCCCTTGGTCCTGTGAAGGCTCGATTCCCCAGTGTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAGAGAGGCCCTTGGTCCTGTGAAGGCTCGATTCCCCAGTGTAGG  100

seq1  GTAAAAAAGAGCAGGAAGGTAGGAGTGGATGGGTGGATAGGGAAACACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAAAGAGCAGGAAGGTAGGAGTGGATGGGTGGATAGGGAAACACCC  150

seq1  TCATAGAAGCAGGAGAGGAGGGATGAGATAGGAAGATTTTTGGGGAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGAAGCAGGAGAGGAGGGATGAGATAGGAAGATTTTTGGGGAGAGG  200

seq1  CAGGAAAGTGGATAACATTTAAAATGCAAATAAAAAAATATCCAATTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGTGGATAACATTTAAAATGCAAATAAAAAAATATCCAATTTTT  250

seq1  AAAAAGGAAAACAATATGAAAAATTTTGTCTGTCACTCAAGAGTGAGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGAAAACAATATGAAAAATTTTGTCTGTCACTCAAGAGTGAGATA  300

seq1  TATCATTTAAAATTCTTCAATTCTAAACACTGTGATGGATTTTTTCCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTTAAAATTCTTCAATTCTAAACACTGTGATGGATTTTTTCCTAC  350

seq1  AAGTTTTTATTTAAAAAATATATGTTCAGAAGCTGAGAAAATTCATTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTTATTTAAAAAATATATGTTCAGAAGCTGAGAAAATTCATTTAT  400

seq1  ATTTCATATAACCCCTACTTGATATACTCCCTTCTGAACCTTCTGTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATATAACCCCTACTTGATATACTCCCTTCTGAACCTTCTGTAAAA  450

seq1  GACAAATTGATGTCAGTTCAAGGAGTCCTATGCCTACCTTTTCAACACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATTGATGTCAGTTCAAGGAGTCCTATGCCTACCTTTTCAACACAC  500

seq1  AGGAAAACAACAGAGAAAGATAATTCAGAGTAACCAGAGATATACAATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAACAACAGAGAAAGATAATTCAGAGTAACCAGAGATATACAATGA  550

seq1  GATCCTGCCTTAAACAAAATAAATTGTTATGTTTGAATTC  590
      ||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTGCCTTAAACAAAATAAATTGTTATGTTTGAATTC  590

seq1: chr2_88660814_88661696
seq2: B6Ng01-065H11.g_66_945

seq1  GAATTCTCATTGGGTTATGAAACTACTTTTAACTTAGGAGTTTTATCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTGGGTTATGAAACTACTTTTAACTTAGGAGTTTTATCAAT  50

seq1  ATGTGAAATAAAATTTATGTAAACCATCTGGAATTTCTTTCTTTCCTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAATAAAATTTATGTAAACCATCTGGAATTTCTTTCTTTCCTCAA  100

seq1  ATATTTTTTCCTTTTTATGAACTATTAAAATTGCACATAGCTTTGAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTTCCTTTTTATGAACTATTAAAATTGCACATAGCTTTGAGTTA  150

seq1  AAATTTAAAATTATGATACAGACAAGAAGGTTGATAAATAAGCATATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAAAATTATGATACAGACAAGAAGGTTGATAAATAAGCATATACA  200

seq1  TGATAAATAGGCAAACAGAAGATGACACATGATAGCTGAAAACATATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAATAGGCAAACAGAAGATGACACATGATAGCTGAAAACATATTAA  250

seq1  CCATTTTAAAATCTATGATGTAGCCAGTAAAATCTTCATGGTAAACATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTAAAATCTATGATGTAGCCAGTAAAATCTTCATGGTAAACATCC  300

seq1  CATACCTTCTTCTAAAATCTAGAAAGAGAACTGTCATCTTCTCTAGGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTTCTTCTAAAATCTAGAAAGAGAACTGTCATCTTCTCTAGGAAC  350

seq1  CTCAATCAATTATGGGAGATTATGTTAAGTCTTCATGATCTACCTGGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATCAATTATGGGAGATTATGTTAAGTCTTCATGATCTACCTGGCTG  400

seq1  TCACTGTATCAGTACCATGCAGGGTTTTTTTTTTTTGGTTTGTTTGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTATCAGTACCATGCAGGGTTTTTTTTTTTTGGTTTGTTTGTTTG  450

seq1  GTTTTTTTTTTTTTTCATAATTGCTGTGTAATACAGCTTTAGGTCAGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTTTTTTTCATAATTGCTGTGTAATACAGCTTTAGGTCAGGCA  500

seq1  TGGTGATTCCATCAGAGGTTCTTTTATTGTTGAGAATAGTTTTTGCTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATTCCATCAGAGGTTCTTTTATTGTTGAGAATAGTTTTTGCTATC  550

seq1  CTATGGTTTTTGTTATTCTAGATAAATTTGCAAATTACCCTTTGTAACTG  600
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTATGGTTTTTGTTATTCTAGATGAATTTGCAAATTACCCTTTGTAACTG  600

seq1  TGAAGAATTGAGTTGGAATTTTTTATGGGGATTGCATTGAATCTGTAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAATTGAGTTGGAATTTTTTATGGGGATTGCATTGAATCTGTAGAT  650

seq1  TGCTTTCAGCAAGATGGCCATTTTTACTATATCAGTCCTGTCAATCAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCAGCAAGATGGCCATTTTTACTATATCAGTCCTGTCAATCAATA  700

seq1  AGCATGGGAGATCTTTCCATCTTCTGAGATCATCTTTGATTTCTTTCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGGAGATCTTTCCATCTTCTGAGATCATCTTTGATTTCTTTCTTC  750

seq1  AGAGACTTGAAGTTCTTATCATACAGATCTTTCACTTCCTTAGTTAGAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTTGAAGTTCTTATCATACAGATCTTTCACTTCCTTAGTTAGAGT  800

seq1  CACACCAAGGTATTTTATATTATTTGTGACTATGATGAAGGGTGTTGTTT  850
      |||| |||||||||||||||||||||||||||||||||||||||||| ||
seq2  CACA-CAAGGTATTTTATATTATTTGTGACTATGATGAAGGGTGTTGGTT  849

seq1  GCCTAATTTCTTCCTCAGCCTGTTTATCCTTTG  883
      |||| |||||||||||||||||||||| |||||
seq2  GCCT-ATTTCTTCCTCAGCCTGTTTAT-CTTTG  880