BAC Information

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BAC

Clone NameB6Ng01-065P12
Chromosome2 (Build37)
Map Location 45,257,942 - 45,259,075
singlet/doubletsinglet
Overlap genenone
Upstream geneGtdc1, Zeb2
Downstream geneLOC100042661, LOC100041337, LOC666604, LOC383690
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065P12.bB6Ng01-065P12.g
ACCDH885289DH885290
length1,115109
definitionDH885289|Mus musculus domesticus DNA, BAC clone: B6Ng01-065P12, 5' end.DH885290|Mus musculus domesticus DNA, BAC clone: B6Ng01-065P12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctataccttaaacaatcaaagaactaaattctttatctata
gagtatgtataaaccggaaagggaaaacatttactcagagataaacatgt
atcacactcagtgggttcaggggaaatgaaatgttgagaattatgtataa
gtcagtggaggtcatttttgaggcaaattaatgatacaaattcttgcaat
ataaataattccccaatggtaagccatgtgggtggagccatgctccaaga
tatcctttaaggacctgcatgacgaagtatagttactatagtgggatgct
tccatgatcaccctagagatgagtccctacaagccagcagacaggggaga
aaataatggaaaatatgtacaataagtcttaatggggctggatatgacaa
ccaaagttcttctagttaggacctatcatgttgcaacaattaaatttaag
acagacaagaaaataaagctgcatggcctaagcaagaaccatgaagtttc
tgtttttatctaggtactgattccatcttctatctttctggtcattcata
atagtcacgcactccctgctatctacacaatggaacacagtccagtctcc
caaaaagcaacatttcacttacttttttgagattaatgttactaagttgt
tgtttttctttattcaagttaagttagttcctggtggtcccatgactgtg
agaaagataactctttactttttctacactgatatgaatacaaaaacaaa
agagcattatcagacacttatattaaaataggcaaacagtagacagacct
acagtactcacagacagttgcagaatcctgatgggccaactgtagagtag
tacaataaccaatccctgacactactaataataccctgttatacttacag
acaggagcctagcataactgttatctgagaggatccacctagaaactgac
caaaaaggacacagagacccacagataaacattatatgtagctcagagtc
ttgtgagagttggggggagatgagaccagaaggataggactctacagaag
acaacgatccactagctctgaccttgagagctccaagactgaccaacaca
ccaaaaatgatacat
ccaagggaggatgcacaaatctatctcggaagggaaaactaaatagtcat
aggggtgggtagaaagagggaacaggctaggagaggaagtgacgggggtg
ggggagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_45257942_45259075
seq2: B6Ng01-065P12.b_46_1160 (reverse)

seq1  ATGTATCATCTTTGGT-TGTTGGTTCAGTCTCTGGGAGCTCTCAAGGGTC  49
      ||||||||| |||||| |||||| ||||  ||| ||||||||||| ||||
seq2  ATGTATCATTTTTGGTGTGTTGG-TCAG--TCTTGGAGCTCTCAA-GGTC  46

seq1  CAGGTTAGTTGATTCTGTTGGTCTTCTTGTAGAGTTCCTATCCCTTCTTG  99
         | |||| |||   ||| |||||| ||||||| |||||| ||||| ||
seq2  AGAGCTAGTGGAT--CGTT-GTCTTC-TGTAGAG-TCCTAT-CCTTC-TG  89

seq1  GTCCCTCAATCCTTCCCCCCAACTCTTCCACAAGACTCCCTGAGCTACAT  149
      ||| |   |||  |||||||||||||  |||||||||  |||||||||||
seq2  GTCTC---ATC--TCCCCCCAACTCT--CACAAGACT--CTGAGCTACAT  130

seq1  ATAATGTTTATCTGTGGGTCTCTGTGTCTGTTTTGGTCAGTTTCTAGGTG  199
      ||||||||||||||||||||||||||||  ||||||||||||||||||||
seq2  ATAATGTTTATCTGTGGGTCTCTGTGTCCTTTTTGGTCAGTTTCTAGGTG  180

seq1  GATCCTCTCAGATAACAGTTATGCTAGGCTCCTGTCTGTAAGTATAACAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCTCAGATAACAGTTATGCTAGGCTCCTGTCTGTAAGTATAACAG  230

seq1  GGTATTATTAGTAGTGTCAGGGATTGGTTATTGTACTACTCTACAGTTGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTATTAGTAGTGTCAGGGATTGGTTATTGTACTACTCTACAGTTGG  280

seq1  CCCATCAGGATTCTGCAACTGTCTGTGAGTACTGTAGGTCTGTCTACTGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCAGGATTCTGCAACTGTCTGTGAGTACTGTAGGTCTGTCTACTGT  330

seq1  TTGCCTATTTTAATATAAGTGTCTGATAATGCTCTTTTGTTTTTGTATTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTATTTTAATATAAGTGTCTGATAATGCTCTTTTGTTTTTGTATTC  380

seq1  ATATCAGTGTAGAAAAAGTAAAGAGTTATCTTTCTCACAGTCATGGGACC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAGTGTAGAAAAAGTAAAGAGTTATCTTTCTCACAGTCATGGGACC  430

seq1  ACCAGGAACTAACTTAACTTGAATAAAGAAAAACAACAACTTAGTAACAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGAACTAACTTAACTTGAATAAAGAAAAACAACAACTTAGTAACAT  480

seq1  TAATCTCAAAAAAGTAAGTGAAATGTTGCTTTTTGGGAGACTGGACTGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTCAAAAAAGTAAGTGAAATGTTGCTTTTTGGGAGACTGGACTGTG  530

seq1  TTCCATTGTGTAGATAGCAGGGAGTGCGTGACTATTATGAATGACCAGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTGTGTAGATAGCAGGGAGTGCGTGACTATTATGAATGACCAGAA  580

seq1  AGATAGAAGATGGAATCAGTACCTAGATAAAAACAGAAACTTCATGGTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAAGATGGAATCAGTACCTAGATAAAAACAGAAACTTCATGGTTC  630

seq1  TTGCTTAGGCCATGCAGCTTTATTTTCTTGTCTGTCTTAAATTTAATTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTAGGCCATGCAGCTTTATTTTCTTGTCTGTCTTAAATTTAATTGT  680

seq1  TGCAACATGATAGGTCCTAACTAGAAGAACTTTGGTTGTCATATCCAGCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACATGATAGGTCCTAACTAGAAGAACTTTGGTTGTCATATCCAGCC  730

seq1  CCATTAAGACTTATTGTACATATTTTCCATTATTTTCTCCCCTGTCTGCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAAGACTTATTGTACATATTTTCCATTATTTTCTCCCCTGTCTGCT  780

seq1  GGCTTGTAGGGACTCATCTCTAGGGTGATCATGGAAGCATCCCACTATAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGTAGGGACTCATCTCTAGGGTGATCATGGAAGCATCCCACTATAG  830

seq1  TAACTATACTTCGTCATGCAGGTCCTTAAAGGATATCTTGGAGCATGGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATACTTCGTCATGCAGGTCCTTAAAGGATATCTTGGAGCATGGCT  880

seq1  CCACCCACATGGCTTACCATTGGGGAATTATTTATATTGCAAGAATTTGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCACATGGCTTACCATTGGGGAATTATTTATATTGCAAGAATTTGT  930

seq1  ATCATTAATTTGCCTCAAAAATGACCTCCACTGACTTATACATAATTCTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTAATTTGCCTCAAAAATGACCTCCACTGACTTATACATAATTCTC  980

seq1  AACATTTCATTTCCCCTGAACCCACTGAGTGTGATACATGTTTATCTCTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTCATTTCCCCTGAACCCACTGAGTGTGATACATGTTTATCTCTG  1030

seq1  AGTAAATGTTTTCCCTTTCCGGTTTATACATACTCTATAGATAAAGAATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATGTTTTCCCTTTCCGGTTTATACATACTCTATAGATAAAGAATT  1080

seq1  TAGTTCTTTGATTGTTTAAGGTATAGAAAGAATTC  1134
      |||||||||||||||||||||||||||||||||||
seq2  TAGTTCTTTGATTGTTTAAGGTATAGAAAGAATTC  1115