BAC Information

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BAC

Clone NameB6Ng01-067G10
Chromosome14 (Build37)2 (Build37)
Map Location 18,865,909 - 18,867,068142,773,282 - 142,773,831
singlet/doubletsingletsinglet
Overlap geneThrb
Upstream genenone
Downstream geneLOC627608, Nr1d2, LOC632287, Rpl15, Nkiras1, Ube2e1, LOC627717, LOC238963, Ube2e2, LOC627741, LOC100042299
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067G10.bB6Ng01-067G10.g
ACCDH886302DH886303
length1,146787
definitionDH886302|Mus musculus domesticus DNA, BAC clone: B6Ng01-067G10, 5' end.DH886303|Mus musculus domesticus DNA, BAC clone: B6Ng01-067G10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,865,909 - 18,867,068)(142,773,282 - 142,773,831)
sequence
gaattcaaatccctttcttcctcccttcagatcgcccagggctagcctgt
gttgagagaatagagaaataccaagacagtttcctgttggcctttgaaca
ctatatcaattaccggaagcaccatgtgacacacttttggcccaaactcc
tgatgaaggtgacagacctgcggatgattggagcttgccatgccagccgc
ttcctccacatgaaggtggagtgccccactgagctcttcccgcctctgtt
cttagaagtatttgaggactaaatttactggacaagttcttgtcattcct
gcagcacgactgggtgtcattgcattccacctgtagcattctgttgttgt
ttcttcgtttctctgtgtcaagtgagatcatcgatggtcagcagatcacc
aatggcatagacttggatgaaattgttctttgaatgtgggtctttgtaac
cattgcattttgttctccagtccttggtgtgaatgctttgaagggcttac
agcagtgcagtctgagtggggtacaatcattatttcaccagcacgaagtc
atcaccagctcccatctgtccctgggcagactcaagcaagccaaacagca
tttcagaagactaaagaagccttaaaaccgagaccacagtcatcttgatc
caacatgatccattctgatgtgtgcaaggtgaagctgtagagcccaggcc
gcctcagggtgagcatggcttttatcacggaaggggagaaggagcagttt
ctactcaggagctcatcattgccagcactcgtgttctccaagcagcctga
cttggaatgtgcaggaatatccataccataacaaatcaactttcctttcc
atggccttttgtaaccttatgatttacttcaagttgcacaagagtatgac
ttgactggtttgaggccacaaagaaagtcttttttttttttttttttttc
agtatgcccatagagctgtaaatctcatcaatgtaagcatactttccaaa
tgggggttgggggtacttcagcaggaggcaactttccaccttaggattcc
cagccacaagctcggatctgtttaacaagtgcagtccctttcaatggcca
tggaggcagtctctgccagcttagctccaaaggcttatcaggctgt
gaattctttgtttagttctgtaccccatttttaaataggattatttgatt
ttctggagtccagcttcttgagttctttgtattaaggaaaagtaattgtt
gctttctgttatttttgttgttagagtcgggattctgttcttgtgcctat
cttcttttaggtttattgatggataactttcttgctttttctagggcgta
atttccctccttgtgttggagttttacctttaatatcctttgaagggctg
gatttgtggaaagatattgtgtgaatttggttttgtcatggaatactttg
gtttctccatctatggtaattgagagttttgttgggtatagtacctgggc
tggcatttgtgttctcttagggtctgtataacatctggtgtgattttaat
aggtgtgcctttatatgttacttgaccttttccccttactacttttaata
ttctatctttattcagttcacttgttcttctgattattatgtgatgggag
gaatttcttttctggcccagtctatttggagttttgtaggcttcttgtat
gttcatgggcatctctttctttaggtatgggaagttttcttctataattt
tgtttgaagatatttgctggccctttaagttgaaaatcttcattctcatc
tactcctattatccataggtttgggtcttctcattgtctcttgatttcct
ggatgtttttgatttaggattttttttgcttttgcattttctttgattgt
ttgtgtccatgttccctatggaatcttctgtacctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_18865909_18867068
seq2: B6Ng01-067G10.b_49_1194

seq1  GAATTCAAATCCCTTTCTTCCTCCCTTCAGATCGCCCAGGGCTAGCCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATCCCTTTCTTCCTCCCTTCAGATCGCCCAGGGCTAGCCTGT  50

seq1  GTTGAGAGAATAGAGAAATACCAAGACAGTTTCCTGTTGGCCTTTGAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGAGAATAGAGAAATACCAAGACAGTTTCCTGTTGGCCTTTGAACA  100

seq1  CTATATCAATTACCGGAAGCACCATGTGACACACTTTTGGCCCAAACTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCAATTACCGGAAGCACCATGTGACACACTTTTGGCCCAAACTCC  150

seq1  TGATGAAGGTGACAGACCTGCGGATGATTGGAGCTTGCCATGCCAGCCGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAAGGTGACAGACCTGCGGATGATTGGAGCTTGCCATGCCAGCCGC  200

seq1  TTCCTCCACATGAAGGTGGAGTGCCCCACTGAGCTCTTCCCGCCTCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCACATGAAGGTGGAGTGCCCCACTGAGCTCTTCCCGCCTCTGTT  250

seq1  CTTAGAAGTATTTGAGGACTAAATTTACTGGACAAGTTCTTGTCATTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAAGTATTTGAGGACTAAATTTACTGGACAAGTTCTTGTCATTCCT  300

seq1  GCAGCACGACTGGGTGTCATTGCATTCCACCTGTAGCATTCTGTTGTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCACGACTGGGTGTCATTGCATTCCACCTGTAGCATTCTGTTGTTGT  350

seq1  TTCTTCGTTTCTCTGTGTCAAGTGAGATCATCGATGGTCAGCAGATCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCGTTTCTCTGTGTCAAGTGAGATCATCGATGGTCAGCAGATCACC  400

seq1  AATGGCATAGACTTGGATGAAATTGTTCTTTGAATGTGGGTCTTTGTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCATAGACTTGGATGAAATTGTTCTTTGAATGTGGGTCTTTGTAAC  450

seq1  CATTGCATTTTGTTCTCCAGTCCTTGGTGTGAATGCTTTGAAGGGCTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCATTTTGTTCTCCAGTCCTTGGTGTGAATGCTTTGAAGGGCTTAC  500

seq1  AGCAGTGCAGTCTGAGTGGGGTACAATCATTATTTCACCAGCACGAAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGCAGTCTGAGTGGGGTACAATCATTATTTCACCAGCACGAAGTC  550

seq1  ATCACCAGCTCCCATCTGTCCCTGGGCAGACTCAAGCAAGCCAAACAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCAGCTCCCATCTGTCCCTGGGCAGACTCAAGCAAGCCAAACAGCA  600

seq1  TTTCAGAAGACTAAAGAAGCCTTAAAACCGAGACCACAGTCATCTTGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAAGACTAAAGAAGCCTTAAAACCGAGACCACAGTCATCTTGATC  650

seq1  CAACATGATCCATTCTGATGTGTGCAAGGTGAAGCTGTAGAGCCCAGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATGATCCATTCTGATGTGTGCAAGGTGAAGCTGTAGAGCCCAGGCC  700

seq1  GCCTCAGGGTGAGCATGGCTTTTATCACGGAAGGGGAGAAGGAGCAGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGGGTGAGCATGGCTTTTATCACGGAAGGGGAGAAGGAGCAGTTT  750

seq1  CTACTCAGGAGCTCATCATTGCCAGCACTCGTGTTCTCCAAGCAGCCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCAGGAGCTCATCATTGCCAGCACTCGTGTTCTCCAAGCAGCCTGA  800

seq1  CTTGGAATGTGCAGGAATATCCATACCATAACAAATCAACTTTCCTTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAATGTGCAGGAATATCCATACCATAACAAATCAACTTTCCTTTCC  850

seq1  ATGGCCTTTTGTAACCTTATGATTTACTTCAAGTTGCACAAGAGTATGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTTTTGTAACCTTATGATTTACTTCAAGTTGCACAAGAGTATGAC  900

seq1  TTGACTGGTTTGAGGCCACAAAGAAAGTCTTTTTTTTTTTTTTTTTTTTT  950
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTGACTGGTTTGAGGCCACAAAGAAAGTC-TTTTTTTTTTTTTTTTTTTT  949

seq1  CAGTATGCCCATAGAGCTTGTAAATCTTCATCAATGTTAAAGCATACTTT  1000
      ||||||||||||||||| |||||||| ||||||||||  |||||||||||
seq2  CAGTATGCCCATAGAGC-TGTAAATC-TCATCAATGT--AAGCATACTTT  995

seq1  CCAAAATGCGTGTGGTGTTACCTCAAGCAGGAAGGCACCTTTCCACCTTA  1050
      |||||  | |  ||| | ||| || |||||| ||||| ||||||||||||
seq2  CCAAATGGGGGTTGGGGGTACTTC-AGCAGG-AGGCAACTTTCCACCTTA  1043

seq1  -GATTCACAAGCCACAAAGCTCGAATCTGTTTACATAGTGCAGTCCCTTT  1099
       ||||| | |||||| ||||||| |||||||||   ||||||||||| ||
seq2  GGATTC-CCAGCCAC-AAGCTCGGATCTGTTTAACAAGTGCAGTCCC-TT  1090

seq1  TCAATGGCCTATGAAGCAGTCCTCTGCCCAGCTTAGCTCACAAAGGTCTT  1149
      |||||||||   || ||||| ||||| |||||||||||| |||||| |||
seq2  TCAATGGCCATGGAGGCAGT-CTCTG-CCAGCTTAGCTC-CAAAGG-CTT  1136

seq1  ATCCAGGCTGT  1160
      || ||||||||
seq2  AT-CAGGCTGT  1146

seq1: chr2_142773282_142773831
seq2: B6Ng01-067G10.g_344_853 (reverse)

seq1  TCAGGTGCAGAAGATTCCATAGAGAACATCGGCAC-AACAATCAAAGAAA  49
      | |||| ||||||||||||||| |||||| | ||| ||||||||||||||
seq2  TAAGGTACAGAAGATTCCATAGGGAACATGGACACAAACAATCAAAGAAA  50

seq1  ATGGAAAATGCAAAAAGATCCTAACTC-AAAATATCCAGGAAATCCAGGA  98
      ||| ||||   ||||| ||||||| || |||| ||||||||||| || ||
seq2  ATGCAAAAGCAAAAAAAATCCTAAATCAAAAACATCCAGGAAAT-CAAGA  99

seq1  CACAATGAGAAGA-CCAAACCTACGGATAATAGGAGTGGATGAGAATGAA  147
       |||||||||||| ||||||||| ||||||||||||| ||||||||||||
seq2  GACAATGAGAAGACCCAAACCTATGGATAATAGGAGTAGATGAGAATGAA  149

seq1  GATTTTCAACTCAAAGGACCAGCAAACATCTTC-AACAAAATTATTGAAG  196
      ||||||||||| ||||| |||||||| |||||| ||||||||||| ||||
seq2  GATTTTCAACTTAAAGGGCCAGCAAATATCTTCAAACAAAATTATAGAAG  199

seq1  AAAACTTGCCAAATCTAAAGAAAGAGATGCCTATGAACATACAAGAAGCC  246
      ||||||| ||| | ||||||||||||||||| ||||||||||||||||||
seq2  AAAACTTCCCATACCTAAAGAAAGAGATGCCCATGAACATACAAGAAGCC  249

seq1  TACAGAACTCCAAATAGACTGGACCAGAAAAGAAATTCCTCCCAACACAT  296
      |||| ||||||||||||||||| ||||||||||||||||||||| |||||
seq2  TACAAAACTCCAAATAGACTGGGCCAGAAAAGAAATTCCTCCCATCACAT  299

seq1  AATAATCAGAACAACAAATGCACTAAATAAAGATAGAATACTAAAAGCAG  346
      ||||||||||| ||||| || ||| ||||||||||||||| |||||| ||
seq2  AATAATCAGAAGAACAAGTGAACTGAATAAAGATAGAATATTAAAAGTAG  349

seq1  TAAGGGAAAAAGGTCAAGTAACATATAAAGGCAAGCCTATCAGAATTACA  396
      |||||| ||||||||||||||||||||||||||  ||||| | ||| |||
seq2  TAAGGGGAAAAGGTCAAGTAACATATAAAGGCACACCTATTAAAATCACA  399

seq1  CCAGATTTTTCACCAGAGACTATGAAAGCCAGAAGAGCCTGGACAGATGT  446
      |                                          |||||||
seq2  C------------------------------------------CAGATGT  407

seq1  TATACAGACACTAAGAGAACACAAATTCCAGCCCAGGCTACTATACCCAG  496
      ||||||||| |||||||||||||||| |||||||||| ||||||||||| 
seq2  TATACAGACCCTAAGAGAACACAAATGCCAGCCCAGG-TACTATACCCAA  456

seq1  CCAAACTCTCAATTACCATAGATGGAGAAACCAAAGTATTCCATGACAAA  546
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTCTCAATTACCATAGATGGAGAAACCAAAGTATTCCATGACAAA  506

seq1  ACCA  550
      ||||
seq2  ACCA  510