BAC Information

Click to search

BAC

Clone NameB6Ng01-069A16
Chromosome2 (Build37)
Map Location 86,362,842 - 86,363,766
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076
Downstream geneLOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069A16.bB6Ng01-069A16.g
ACCDH887460DH887461
length1,256923
definitionDH887460|Mus musculus domesticus DNA, BAC clone: B6Ng01-069A16, 5' end.DH887461|Mus musculus domesticus DNA, BAC clone: B6Ng01-069A16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaagactttatagaattcaatgaaaatgaggactcatcatatag
aaacttatgtaacacaatgaaagcagtgttacgtagaatattcagagcac
taagtgccttcataaagaaattgaagagataccaaacaagcaaattaaca
gcacaactaaaagctctagaacagatagaaccaaacatacccaagaggag
tagaggcgggaaatagtcaaactcagttctgaaatcaaccagttagaaag
aaagagaacacgtaataaaaaacaaaacaaaacaaaacacccagagctgg
ttctttgagaaatcaaaaaggtaaataaacccttagctaaactaactcaa
ggactcagagaatatatctgacctgtccagcaggtctaattattcgagtg
tctcgaggggaccttctcctaagaaccaaattgggggagagaaggacggg
caccaagtgggagaaacgacacataaacagtctgagaagcatcaaggtgt
cactgtattcagcagggttcaaggcttaaatgcacaaacaaaaggccaag
cacttctcagcaggagggatggggcagcagaaatttttttttggcaacta
catggggaagcaggaacttggtggtatcagggtacatattgaggtcagga
catctggtgctgacatagggctggaacattctgtggttgtcctcggaacg
gtgtgtcagtggctcgcttttgaccccagtttcttcttaggggggagagg
cccaattcggagatcaagacaatagagttgtcttaatagctcccaacaat
tatacaaattaacaaaattagaaatgaaactgtagactaaataagagaat
ctgaggaaattcaaaaaatcatcagaacatactgcaaaagcctatactct
aaaaaagtaaaatcttgattaaatgtattattttctagatagatactatg
taccaaagttaaatcagatcaaggaagctatcaaacagtgccatacctct
aagaaaatataaatagtcatcaaatacctttaaatcaaagaaaaaaaatc
caggcctgattgttttagtgtagattctaccagactttcaaaagagctaa
taccatacttcctcaaactatttcataaaagaaacgagaccctacctaat
tcattataagcaagtactgatctaattcctaagtccaaagagacctaacc
gttccttcaattaatgcaaaactccagtgagtttctccaaactggattct
cgagac
gaattccctatggtgtttattacagaagactaagtgcattcatagcatat
tcaaacttgtattttgtgttcttttagacagtgaattacagaatatctga
aggatgttagtcgggagctggaatttaaaatttccagattaattgtgcta
tttttggttagatattttatttaataaaatatttattctttactgtgcta
tgaatgtcacaagtgttttcaaattctaatttattcacagtaacatctag
caattaaaatcaagtttttattgaaaataaagaaaaactaacctcagaat
ttataatattgggatcaaaagcagttctccttaaagagtttataaatttc
cttattagtgaatatatttcaaaacaaggatacttataaatgcatagaaa
atagagaaatgcttttatatttgttgagttaaaaataagttatattctaa
gttttgacacaaagaaagtacatgaatgagcctttacaagccaacaacaa
cagggtatgggtagtccctcagagcacatgtccctgaagaataatgacac
tcccatactcagcaatcactaattaacatcaatagcttctcggtttgggt
tgggacttcatcaccacatcctcatttgtgctttaggttttgtttttttt
ttttttttcttgacctcacatagttttgtacatgtataacagctctgtgt
atctcaaaaacacagttttgctatgaccatgcattgctcctggtgcttac
actctccttatacttgtctataagtgatacttttttacaaagtggtatga
ggaaggtgtcacattcagagctaagtgttttgatgtcttttttttttaaa
taccccaagcagttgtgggtatctgttagtctccatttatggtagggaag
aagtgtttggggtttttgtttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86362842_86363766
seq2: B6Ng01-069A16.g_65_987 (reverse)

seq1  ACAAACAAAAACCCCAAACACCTTCTTCCCTACCATAAATGGAGACTAAC  50
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACAAACAAAAACCCCAAACA-CTTCTTCCCTACCATAAATGGAGACTAAC  49

seq1  AGATACCCACAACTGCTTGGGGTATTTAAAAAAAAAAAGACATCAAAACA  100
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGATACCCACAACTGCTTGGGGTATTT-AAAAAAAAAAGACATCAAAACA  98

seq1  CTTAGCTCTGAATGTGACACCTTCCTCATACCACTTTGTAAAAAAGTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCTCTGAATGTGACACCTTCCTCATACCACTTTGTAAAAAAGTATC  148

seq1  ACTTATAGACAAGTATAAGGAGAGTGTAAGCACCAGGAGCAATGCATGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATAGACAAGTATAAGGAGAGTGTAAGCACCAGGAGCAATGCATGGT  198

seq1  CATAGCAAAACTGTGTTTTTGAGATACACAGAGCTGTTATACATGTACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCAAAACTGTGTTTTTGAGATACACAGAGCTGTTATACATGTACAA  248

seq1  AACTATGTGAGGTCAAGAAAAAAAAAAAAAAAACAAAACCTAAAGCACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGTGAGGTCAAGAAAAAAAAAAAAAAAACAAAACCTAAAGCACAA  298

seq1  ATGAGGATGTGGTGATGAAGTCCCAACCCAAACCGAGAAGCTATTGATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGATGTGGTGATGAAGTCCCAACCCAAACCGAGAAGCTATTGATGT  348

seq1  TAATTAGTGATTGCTGAGTATGGGAGTGTCATTATTCTTCAGGGACATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGTGATTGCTGAGTATGGGAGTGTCATTATTCTTCAGGGACATGT  398

seq1  GCTCTGAGGGACTACCCATACCCTGTTGTTGTTGGCTTGTAAAGGCTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGAGGGACTACCCATACCCTGTTGTTGTTGGCTTGTAAAGGCTCAT  448

seq1  TCATGTACTTTCTTTGTGTCAAAACTTAGAATATAACTTATTTTTAACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTACTTTCTTTGTGTCAAAACTTAGAATATAACTTATTTTTAACTC  498

seq1  AACAAATATAAAAGCATTTCTCTATTTTCTATGCATTTATAAGTATCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATATAAAAGCATTTCTCTATTTTCTATGCATTTATAAGTATCCTT  548

seq1  GTTTTGAAATATATTCACTAATAAGGAAATTTATAAACTCTTTAAGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAAATATATTCACTAATAAGGAAATTTATAAACTCTTTAAGGAGA  598

seq1  ACTGCTTTTGATCCCAATATTATAAATTCTGAGGTTAGTTTTTCTTTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTTTGATCCCAATATTATAAATTCTGAGGTTAGTTTTTCTTTATT  648

seq1  TTCAATAAAAACTTGATTTTAATTGCTAGATGTTACTGTGAATAAATTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAAAAACTTGATTTTAATTGCTAGATGTTACTGTGAATAAATTAG  698

seq1  AATTTGAAAACACTTGTGACATTCATAGCACAGTAAAGAATAAATATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGAAAACACTTGTGACATTCATAGCACAGTAAAGAATAAATATTTT  748

seq1  ATTAAATAAAATATCTAACCAAAAATAGCACAATTAATCTGGAAATTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATAAAATATCTAACCAAAAATAGCACAATTAATCTGGAAATTTTA  798

seq1  AATTCCAGCTCCCGACTAACATCCTTCAGATATTCTGTAATTCACTGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCAGCTCCCGACTAACATCCTTCAGATATTCTGTAATTCACTGTCT  848

seq1  AAAAGAACACAAAATACAAGTTTGAATATGCTATGAATGCACTTAGTCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACACAAAATACAAGTTTGAATATGCTATGAATGCACTTAGTCTT  898

seq1  CTGTAATAAACACCATAGGGAATTC  925
      |||||||||||||||||||||||||
seq2  CTGTAATAAACACCATAGGGAATTC  923