BAC Information

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BAC

Clone NameB6Ng01-069H12
Chromosome2 (Build37)
Map Location 36,325,977 - 36,326,495
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666042, LOC100042194, Dab2ip, Ttll11, Ndufa8, 1700010A17Rik, Lhx6, Rbm18, LOC100042236, Mrrf, LOC100040493, Ptgs1, Olfr334-ps1, Olfr335, Olfr336-ps1, Olfr337-ps1, Olfr338, LOC675440, Olfr339, Olfr340
Downstream geneOlfr341, Olfr342, Olfr343-ps1, Olfr344, Olfr345, Olfr346, Olfr347, Olfr348, Olfr50, Rpl18p, Olfr3, Olfr349-ps1, Olfr350, Olfr351, Olfr352, Olfr353, Olfr354, Olfr355, Olfr356, Olfr357, Olfr358, Olfr359-ps1, Olfr360, Olfr361, Olfr362, Olfr364-ps1, Olfr365, Olfr366, Olfr367, Olfr368, Pdcl, Rc3h2, Zbtb6, Zbtb26, Rabgap1
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069H12.bB6Ng01-069H12.g
ACCDH887770DH887771
length1,261994
definitionDH887770|Mus musculus domesticus DNA, BAC clone: B6Ng01-069H12, 5' end.DH887771|Mus musculus domesticus DNA, BAC clone: B6Ng01-069H12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccataaattcattctttttaatagctgagtagtactccattgtgt
agatgtaccacattttctgtatccattcctctgttgaggggcatctgggt
tctttccagcttctggctaatataaataaggctgctatgaacatagtgga
gcatgtgtccttcttaccagttggggcatcttctggatatatgcccagga
gaggtattgctggatcctccggtagtactatgtccaattttttgaggaac
cgccagactgatttccagagtggttgtacaagtctgcaatctcaccaaca
atggaggagtgttcatctttctcttacatccacggcagaatctgctgtca
cctgaatttttgaccttagccattctgactggcgttaggtggaatctcag
ggttgttttgatttgcatttccctgatgattaagattgttgaacattttt
tcaggtgattctcagccattttataagtttcagtgtctcaggttttatgt
gaagttccttgatccacttagatttgaccttagtacaaggagagaagtat
ggatcaattcgcattcttctaaatgataacaaccaattgtgccagcacca
attgttgaaaatgctatctttcttccactggatggttttagctcccttgt
cgaagatcaagtgaccataggtgtgtgggttcatttctggtacttcaatt
ctattccattggtctacttgtctgtctctatacaagtaccatgcagtttt
tatcacaattgctctgtagtaaagctttaggtcaggcatggtgattccag
aagaggttcttttatccttgagaagagtttttgctatcctaggttttttg
ttattccagatgaatttgcaaattgctccttctaattcgttgaagaattg
agttggaattttgatggggattgcattgaatctgtagattgcttttgaca
agatagccatttttacatgttgatctgccaatccatgagcatgggagatc
tttccatcttctgagatcttctttaatttatttcttcagagactgaagtt
tatctatagatctttcacttccttagtaaagtcacgccgaatatgttaat
tattgtgactattaagagaggggtgtagttccttattctttcccacccgt
ttattctttgttaggcatgccatgacttgtgagtatatatatcccgcatt
ccgaaccgttacgatggattccgggatatttaggctcatttaactcacat
acttacggcaa
gaattcccagcctgagcaattcgacaacaggagatcaaggggatacaaat
tggaaaggaagaagtcaaaatatcattctttacagatgatatgatagttt
atgtatgtgaccctaaaatttccacaagagaacttctaaacctgataaac
agattcagaggagtagcttgatataaaattaattcaaacaaatcaatgac
atttctctaaacaaaggagaaatagactgagaaaaaaaatagagaaacaa
cacccttcacaatagtcacaaataatataaaatactttggtgtgactcta
actaagaaagtgaaagatctgtatgataacaagttcaaatttctgaaaaa
aaattgaagaggatctcataagatggaaagatcttctgtgctcatggatt
ggcaggattaatatagtcaaaatggctatcctgccaaaagtaatctacac
atttaatgcactccccatcaaaattgcagctcaattcttaactaagttag
aaagggcaatttgaaaattcatctggaataatacaaaacctaggatagca
aaaaaccagcctgaacaataaaataacctgtgatgtatcccgtcccacgg
gtttcagttattcgtgggtgcgagggagaccgaaaacctggaaggagatt
ggaggaagaaaaagaagagtaggagaccaggaaggatacctatcagggtc
tcgtttattagtatgaggtgccttctttttaaagcatacattgaggggac
tatgggaggggccgagggagaattatacaaagaacaaagaagtggtcatc
tgctgacatgggggccaaaatcagtgccaggcagtgggcactctgcatct
tatctctggagcatcgatcctccttgacagccttggctgtcaggctgggc
tcaagcgtaactcatgtacttggatggcattgggactcaggagagatagg
gagaggggactatcattcagctttacagcctcaggtgccaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_36325977_36326495
seq2: B6Ng01-069H12.g_311_1061

seq1  GAAACAACACCCTTCAGGATAGTCACAAATAATAATAATAAAAAAAACCC  50
      ||||||||||||||||  |||||||||||||||    |||||| |   | 
seq2  GAAACAACACCCTTCACAATAGTCACAAATAAT----ATAAAATA---CT  43

seq1  TTGGTGTGACTCTAACTAAGGAAGTTAAAGATATGTATGACAAGAACTTC  100
      |||||||||||||||||||| |||| |||||| ||||||| || || |||
seq2  TTGGTGTGACTCTAACTAAGAAAGTGAAAGATCTGTATGATAACAAGTTC  93

seq1  AAGTCT--------------------------------------------  106
      || | |                                            
seq2  AAATTTCTGAAAAAAAATTGAAGAGGATCTCATAAGATGGAAAGATCTTC  143

seq1  --------------------------------------------------  106
                                                        
seq2  TGTGCTCATGGATTGGCAGGATTAATATAGTCAAAATGGCTATCCTGCCA  193

seq1  --------------------------------------------------  106
                                                        
seq2  AAAGTAATCTACACATTTAATGCACTCCCCATCAAAATTGCAGCTCAATT  243

seq1  --------------------------------------------------  106
                                                        
seq2  CTTAACTAAGTTAGAAAGGGCAATTTGAAAATTCATCTGGAATAATACAA  293

seq1  -------------------------------------------------T  107
                                                       |
seq2  AACCTAGGATAGCAAAAAACCAGCCTGAACAATAAAATAACCTGTGATGT  343

seq1  ATCCCGTCCCGCGTGATTCAGTTATTCATGGCTGCGAGGGGGACCGCAAA  157
      |||||||||| || | ||||||||||| ||| |||||||| ||||| |||
seq2  ATCCCGTCCCACGGGTTTCAGTTATTCGTGGGTGCGAGGGAGACCGAAAA  393

seq1  CCTGGAAGGAGATGGAAGGAAGAAAAAGAGGAGTAGGAGACCAGGAAGGG  207
      ||||||||||||| | ||||||||||||| ||||||||||||||||||| 
seq2  CCTGGAAGGAGATTGGAGGAAGAAAAAGAAGAGTAGGAGACCAGGAAGGA  443

seq1  TACCTTTCGAGGTCTTGTTTATTATGCTGAGGTGCCTTCTTTTTAAAGCA  257
      ||||| ||  ||||| ||||||||   |||||||||||||||||||||||
seq2  TACCTATCAGGGTCTCGTTTATTAGTATGAGGTGCCTTCTTTTTAAAGCA  493

seq1  TACATCGTGGGGAATATGGGAGGGGTCGAGGGAGAATTATACAAAGAACA  307
      ||||| | ||||| ||||||||||| ||||||||||||||||||||||||
seq2  TACATTGAGGGGACTATGGGAGGGGCCGAGGGAGAATTATACAAAGAACA  543

seq1  AAGAAGTGGGCATCTGCTGACATGGGGGCCGAAGTCAGGCGCCAGGCAGT  357
      ||||||||| |||||||||||||||||||| || ||| | ||||||||||
seq2  AAGAAGTGGTCATCTGCTGACATGGGGGCCAAAATCA-GTGCCAGGCAGT  592

seq1  GGGCACTCTGGATCTTATCTCTGGAACATCAATCCTCCTTGACAGCCTTG  407
      |||||||||| |||||||||||||| |||| |||||||||||||||||||
seq2  GGGCACTCTGCATCTTATCTCTGGAGCATCGATCCTCCTTGACAGCCTTG  642

seq1  GGAGTCAGGCTGGGCTCAGGCGTAACTCATGTCCTTGGATGGCATGGGAA  457
      |  ||||||||||||||| ||||||||||||| |||||||||||| || |
seq2  GCTGTCAGGCTGGGCTCAAGCGTAACTCATGTACTTGGATGGCATTGGGA  692

seq1  CTCAGGAAGAGATAGGGAAGAGGGGACTATAATTCAGCTTTTACAGCCTC  507
      |||||| |||||||||| |||||||||||| ||||||| |||||||||||
seq2  CTCAGG-AGAGATAGGG-AGAGGGGACTATCATTCAGC-TTTACAGCCTC  739

seq1  AGGTGCCAAGAA  519
      ||||||||||||
seq2  AGGTGCCAAGAA  751