BAC Information

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BAC

Clone NameB6Ng01-069J24
Chromosome2 (Build37)10 (Build37)
Map Location 142,776,676 - 142,777,69899,057,423 - 99,058,412
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069J24.bB6Ng01-069J24.g
ACCDH887877DH887878
length942971
definitionDH887877|Mus musculus domesticus DNA, BAC clone: B6Ng01-069J24, 5' end.DH887878|Mus musculus domesticus DNA, BAC clone: B6Ng01-069J24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,676 - 142,777,698)(99,057,423 - 99,058,412)
sequence
gaattctttgttcagttctgagccccatttttaatggggttatttgattt
tctgaagtccaccttcttgagttctttatatatgttggatatcagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacggtgtcttttgccttgcagaaactttggagtttcat
taggtcccatttgtcaattctcgatcttacagcacaagccattgctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagataagtatggatcgattcgca
ttcttctacacgataacaaccagttgtgccagcaccaattgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcgaagatcaagtg
accataggtgtttgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtctctataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtctggcatggtgattccaccagaagttctttt
atccttgagaagacttttgctatcctaggttttttgttattccagacgaa
tttgcaaattgctccttccaattcgttgaagaattgagttggaattttga
tggggattgcattgaatctgtagattgcttttggcaagatagccattttt
acaatgttgatcctgccaatccatgagcatggggagatctttccatcttc
tgagatcttctttaatttctttcttcagagatttgaagtttttatcatac
agatctttcacttccttagttagagtcacgcaagatatttta
gaattcattgtccgtcatccacatagccaaagtcacatgcttggagctga
gcggtcacctttcgttctaactatagggatttattttagggggtgacttg
ctaggatatagtagatcggctgatcgtgaagcaagatggagagttaaggg
ttacacacaggcatcgtgaagaagtgggattgttacctgaaagagggaca
gctgaaagaatggcttaggtggagctagaggtgtgttgagctaagagact
gttgtccatgagggccaggacacccactgcactcggagtcctgagtcctg
tgttttatagttgggctcatttttttttaatctatgcagttttgcttatg
gatattttttattcatttgtttgttttgtctatcgttttatcagccaggg
gcagagcaggcggcagtccttagttcatcctagcttgatacctggcttgg
tggccaaagctgttttatgcccaggactcataaaaatcaaatgaaataaa
atcaaatccaggcagtgcagtgcaaggcaggaagaagactgatggagaca
cgaggtttgtcattccacccacagagctgccctcagacatggcacaggtg
ggccattgacacttgcctgccacgacaccacacagaaggatgatgccacc
caggggtcgccccttcgtggctagcctgcagagggagccaccacagtgtg
tgagtgtgcggtggacaggtgggagagaaatagaagtggagcggcctgag
ccttatgaagagagatggaactggagactcgagggtggagaggaggcgcc
attgtgaggggcagccctcccacccaggctgtgtgaggtcccagccctag
cttctgctgatgcatgtttttgtgtcatggctacaaagcagcggggcttg
tgtcatgtccgtagccaaatactctagagacacggggagtcttggtcagc
agcgcagcgacacgtgctgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776676_142777698
seq2: B6Ng01-069J24.b_47_608 (reverse)

seq1  ACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCA  50

seq1  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAG  100
       ||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTG  100

seq1  GAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTAT  150

seq1  CATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTC  200
      | |||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CGTGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTC  200

seq1  AAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACT  250

seq1  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACA  300
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAA  300

seq1  AATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGAC  350

seq1  AAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGT  400

seq1  CAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATC  450

seq1  CTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAG  500
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTAAATCAGATAGGGGACTGATATCCAACATATATAAAGAACTCAAGAAG  500

seq1  GTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCACAAAA  550
      |||||||||||||||||||||||||||||| |||||||||||||| ||  
seq2  GTGGACTTCAGAAAATCAAATAACCCCATT-AAAAATGGGGCTCAGAA--  547

seq1  CCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAAC  600
                ||| |||||    |||                        
seq2  --------CTGAACAAAGA----ATTC-----------------------  562

seq1  TGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTG  650
                                                        
seq2  --------------------------------------------------  562

seq1  TACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGA  700
                                                        
seq2  --------------------------------------------------  562

seq1  CACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGC  750
                                                        
seq2  --------------------------------------------------  562

seq1  ACAGGGGAAAAATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATC  800
                                                        
seq2  --------------------------------------------------  562

seq1  GAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAA  850
                                                        
seq2  --------------------------------------------------  562

seq1  AAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATC  900
                                                        
seq2  --------------------------------------------------  562

seq1  TTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGA  950
                                                        
seq2  --------------------------------------------------  562

seq1  ACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCATTAAAAAATGGG  1000
                                                        
seq2  --------------------------------------------------  562

seq1  GCTCAGAACTGAACAAAGAATTC  1023
                             
seq2  -----------------------  562

seq1: chr10_99057423_99058412
seq2: B6Ng01-069J24.g_67_1037

seq1  GAATTCATTGTCCGTCATCCACATAGCCAAAGTCACATGCTTGGAGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTCCGTCATCCACATAGCCAAAGTCACATGCTTGGAGCTGA  50

seq1  GCGGTCACCTTTCGTTCTAACTATAGGGATTTATTTTAGGGGGTGACTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTCACCTTTCGTTCTAACTATAGGGATTTATTTTAGGGGGTGACTTG  100

seq1  CTAGGATATAGTAGATCGGCTGATCGTGAAGCAAGATGGAGAGTTAAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGATATAGTAGATCGGCTGATCGTGAAGCAAGATGGAGAGTTAAGGG  150

seq1  TTACACACAGGCATCGTGAAGAAGTGGGATTGTTACCTGAAAGAGGGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACACAGGCATCGTGAAGAAGTGGGATTGTTACCTGAAAGAGGGACA  200

seq1  GCTGAAAGAATGGCTTAGGTGGAGCTAGAGGTGTGTTGAGCTAAGAGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAAGAATGGCTTAGGTGGAGCTAGAGGTGTGTTGAGCTAAGAGACT  250

seq1  GTTGTCCATGAGGGCCAGGACACCCACTGCACTCGGAGTCCTGAGTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCCATGAGGGCCAGGACACCCACTGCACTCGGAGTCCTGAGTCCTG  300

seq1  TGTTTTATAGTTGGGCTCATTTTTTTTTAATCTATGCAGTTTTGCTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATAGTTGGGCTCATTTTTTTTTAATCTATGCAGTTTTGCTTATG  350

seq1  GATATTTTTTATTCATTTGTTTGTTTTGTCTATCGTTTTATCAGCCAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTTTTATTCATTTGTTTGTTTTGTCTATCGTTTTATCAGCCAGGG  400

seq1  GCAGAGCAGGCGGCAGTCCTTAGTTCATCCTAGCTTGATACCTGGCTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCAGGCGGCAGTCCTTAGTTCATCCTAGCTTGATACCTGGCTTGG  450

seq1  TGGCCAAAGCTGTTTTATGCCCAGGACTCATAAAAATCAAATGAAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAAAGCTGTTTTATGCCCAGGACTCATAAAAATCAAATGAAATAAA  500

seq1  ATCAAATCCAGGCAGTGCAGTGCAAGGCAGGAAGAAGACTGATGGAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATCCAGGCAGTGCAGTGCAAGGCAGGAAGAAGACTGATGGAGACA  550

seq1  CGAGGTTTGTCATTCCACCCACAGAGCTGCCCTCAGACATGGCACAGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGTTTGTCATTCCACCCACAGAGCTGCCCTCAGACATGGCACAGGTG  600

seq1  GGCCATTGACACTTGCCTGCCACGACACCACACAGAAGGATGATGCCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATTGACACTTGCCTGCCACGACACCACACAGAAGGATGATGCCACC  650

seq1  CAGGGGTCGCCCCTTCGTGGCTAGCCTGCAGAGGGAGCCACCACAGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGTCGCCCCTTCGTGGCTAGCCTGCAGAGGGAGCCACCACAGTGTG  700

seq1  TGAGTGTGCGGTGGACAGGTGGGAGAGAAATAGAAGTGGAGCGGCCTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTGCGGTGGACAGGTGGGAGAGAAATAGAAGTGGAGCGGCCTGAG  750

seq1  CCTTATGAAGAGAGATGGAACTGGAGACTCGAGGGTGGAGAGGAGGCGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATGAAGAGAGATGGAACTGGAGACTCGAGGGTGGAGAGGAGGCGCC  800

seq1  ATTGTGAGGGGCCAGCCCTCCCACCCAGGCTGTGGTGAGGTCCCAGCCCT  850
      ||||||||||| ||||||||||||||||||||| ||||||||||||||||
seq2  ATTGTGAGGGG-CAGCCCTCCCACCCAGGCTGT-GTGAGGTCCCAGCCCT  848

seq1  AGCTCCTGCTGAATGCCATGTTTTTGTGTTCATGGCTACAAAGCAGCGGG  900
      |||| |||||| ||| |||||||||||| |||||||||||||||||||||
seq2  AGCTTCTGCTG-ATG-CATGTTTTTGTG-TCATGGCTACAAAGCAGCGGG  895

seq1  GCTTGGTGTCAATGTCCGTAGCACAAATTACCTCTAGAGAACACGGGGAA  950
      |||| ||||| ||||||||||| |||||   |||||||| |||||||| |
seq2  GCTT-GTGTC-ATGTCCGTAGC-CAAAT--ACTCTAGAG-ACACGGGG-A  938

seq1  GTCTCTGGTCAGGGCAGCCGCAGCGGACCACGTGGCTGTC  990
      |||| ||||||  |||| |||||||   ||||| ||||||
seq2  GTCT-TGGTCA--GCAG-CGCAGCG--ACACGT-GCTGTC  971