BAC Information

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BAC

Clone NameB6Ng01-070B04
Chromosome6 (Build37)2 (Build37)
Map Location 7,198,872 - 7,199,09647,552,691 - 47,553,414
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG667462, EG667468, LOC667471, LOC100040096, Shfm1, LOC545826, Dlx6as, Dlx5, Acn9, EG667500
Downstream geneTac1, LOC667511, Asns, EG667529, C1galt1, LOC100040661, Col28a1, BC020002
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070B04.bB6Ng01-070B04.g
ACCDH888185DH888186
length1,035725
definitionDH888185|Mus musculus domesticus DNA, BAC clone: B6Ng01-070B04, 5' end.DH888186|Mus musculus domesticus DNA, BAC clone: B6Ng01-070B04, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(7,198,872 - 7,199,096)(47,552,691 - 47,553,414)
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaattatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcgaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaacattggacatagtattaccagaggttcctgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatactccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattttaaaaaaatgaatttatgaaattcctaggca
aatggatggacctggagggcatcatcctgagtgaagtaacccaatcacat
agaaagtcgcacaatatgtactcactgataagtggatattatcccagaaa
cttaggatacccaagatataagatacaatttgctaaacgcatgaaattca
agaagaaagaagaccaaagtgtggatactttgccccttcttataaatggg
aacagaacacccatggaaggagttacagagaccaaatttggagctgtgat
gaaaggatggatcatctaatgactgccatatccagggatccatcccataa
tcagcttctaaacgctgacaccattgcatatactagcaagattttgctga
aaggacccagatatagctctctcttgtgagactatgccgggccctagcaa
acacagaagtggatgatcacagtcagctattggatggatcacaaagcccc
caatggaggagctcgagaaattacccaaggagctaacgggaactgcaacc
ctataggtggaacaacaatatgaactaaccagtac
gaattcaaggcgagcctggtctacagagtgagttccaggacagccagggc
tatacagaaaaaccctgtctcgaaaaatcaaaaacaacaacaacaacaaa
aacaaaaacagaaaacaaactgatgtcagagatgtatgtcagtatgaatg
tgtatgtgtatgcatgtgttttgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtatgtgtgtgtgtgtgcttgtatgtgttaacctcactaacctgtatgtt
agcttctcattttctttaaaggtcttgaaacagatcttttgaaacaaagt
aacaaatatgaattgtgctatcccaaaaggggtgaaaaccagaatctgtg
acataaagttgaagtttagtccttcttagctggttgaagaactgtagatt
tcagtactttggtcatcgctttcaaaaaaaattttgaaaacttgttgaat
aagtaagcatgtttcacctgaactgctgtgacagagtgaaaaataagatc
tcctcccccatctgttatgtccatgctgccctcaaatacatgggaataaa
aagcactcattcactgaatgcgtttgctagcttccctcccaattgagatg
gatgaataattgatagacgtttgatttaccatcttctttgcagtagcatc
acatattaaaccaggttatggcttcttaatatgagtgcatataaaccaca
ctctcaaaagtacatcctgtcatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_7198872_7199096
seq2: B6Ng01-070B04.b_854_1078 (reverse)

seq1  TACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGATCTCTTT  50
      |||||||||||||||||||||||||||||||||||||||||| || | ||
seq2  TACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGTTCCCGTT  50

seq1  AGCTCCTTGGATACTTTCTCTAGCTCCTCCATTAGGGGCCCTGTGATCCA  100
      |||||||||| || |||||| |||||||||||| |||||  |||||||||
seq2  AGCTCCTTGGGTAATTTCTCGAGCTCCTCCATTGGGGGCTTTGTGATCCA  100

seq1  TCTAATAGCTGACTGTGAACATCCACTTCTGTGTTTGCCAGGCCCCGGCA  150
      || ||||||||||||||| ||||||||||||||||||| ||| |||||||
seq2  TCCAATAGCTGACTGTGATCATCCACTTCTGTGTTTGCTAGGGCCCGGCA  150

seq1  TAGTCTCACAAGAGAGAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTCACAAGAGAGAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCT  200

seq1  AGTGTATGCAATGGTGTTAGCGTTT  225
      ||| ||||||||||||| |||||||
seq2  AGTATATGCAATGGTGTCAGCGTTT  225

seq1: chr2_47552691_47553414
seq2: B6Ng01-070B04.g_66_790 (reverse)

seq1  GGATGACAGGATGTACTTTTGA-AATGTGGTTTATATGCACTTCAT-TTC  48
      |||||||||||||||||||||| | |||||||||||||||| |||| || 
seq2  GGATGACAGGATGTACTTTTGAGAGTGTGGTTTATATGCAC-TCATATTA  49

seq1  TGAAGCCATAACCTGGTATAATATGCGAAGATATTTGCAAAGAAGATAGT  98
       |||||||||||||||| ||||||| || | ||  |||||||||||| ||
seq2  AGAAGCCATAACCTGGTTTAATATGTGATGCTA-CTGCAAAGAAGATGGT  98

seq1  AAATCCAACCTCCATCAATTATTCATCCATCTCAATTGGGAGGGAAGCTA  148
      ||||| ||| || |||||||||||||||||||||||||||||||||||||
seq2  AAATCAAACGTCTATCAATTATTCATCCATCTCAATTGGGAGGGAAGCTA  148

seq1  GCAAATGCATTCAGTGAATGACTGCTTTTTATTCCCATGTATTTGAGTGC  198
      ||||| ||||||||||||||| ||||||||||||||||||||||||| ||
seq2  GCAAACGCATTCAGTGAATGAGTGCTTTTTATTCCCATGTATTTGAGGGC  198

seq1  AGCATGGACATAACAGATGGGGGAGGAGCTCTTATTTTTCACTC-CTCAC  247
      |||||||||||||||||||||||||||| |||||||||||||||  ||||
seq2  AGCATGGACATAACAGATGGGGGAGGAGATCTTATTTTTCACTCTGTCAC  248

seq1  AGCAGTTCAGTAGAAACATGCTTACTTATAGAAAAAGTTTTCAAAATTTT  297
      ||||||||||  |||||||||||||||||  || ||||||||||||||||
seq2  AGCAGTTCAGGTGAAACATGCTTACTTATTCAACAAGTTTTCAAAATTTT  298

seq1  TCTTGAAAATGATGACCAAACTACTGAAATCTACAGTTCTTCTACCAGCT  347
      | ||||||  |||||||||| ||||||||||||||||||||| |||||||
seq2  TTTTGAAAGCGATGACCAAAGTACTGAAATCTACAGTTCTTCAACCAGCT  348

seq1  AAGAAGGACTAAACTTCAACTTTATTTCACAGATTCTGGTTTTCACCCCT  397
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAGAAGGACTAAACTTCAACTTTATGTCACAGATTCTGGTTTTCACCCCT  398

seq1  TTTGGGATAGCACAATTCATATTTGTTACTTTGCTTCAAAAGATCTGTTT  447
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTGGGATAGCACAATTCATATTTGTTACTTTGTTTCAAAAGATCTGTTT  448

seq1  CAAGACCTTTAAAGAAAATGAGAAGCTAACATACATGTTACTGAGGTTAA  497
      ||||||||||||||||||||||||||||||||||| |||| |||||||||
seq2  CAAGACCTTTAAAGAAAATGAGAAGCTAACATACAGGTTAGTGAGGTTAA  498

seq1  CACATACAAGCACACACACACACATACACACACACACACACACACACACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACAAGCACACACACACACATACACACACACACACACACACACACA  548

seq1  CACACAAAACACATGCATACACATACACATTCATACTGACATACATCTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAAACACATGCATACACATACACATTCATACTGACATACATCTCT  598

seq1  GACATCAGTTTGTTTTCTGTTTTTGTTTTTGTTGTTGTTGTTGTTTTTGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCAGTTTGTTTTCTGTTTTTGTTTTTGTTGTTGTTGTTGTTTTTGA  648

seq1  TTTTTCGAGACAGGGTTTTTCTGTATAGCCCTGGCTGTCCTGGAACTCAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCGAGACAGGGTTTTTCTGTATAGCCCTGGCTGTCCTGGAACTCAC  698

seq1  TCTGTAGACCAGGCTCGCCTTGAATTC  724
      |||||||||||||||||||||||||||
seq2  TCTGTAGACCAGGCTCGCCTTGAATTC  725