BAC Information

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BAC

Clone NameB6Ng01-070J06
Chromosome2 (Build37)
Map Location 117,427,498 - 117,428,612
singlet/doubletsinglet
Overlap genenone
Upstream geneTmco5, LOC100043557, LOC241621, Spred1, LOC624574, 2610510H03Rik, Rasgrp1
Downstream geneThbs1, Fsip1, Gpr176, 1700054M17Rik, Eif2ak4, Srp14, LOC668859, Bmf, LOC640461, Bub1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070J06.bB6Ng01-070J06.g
ACCDH888540DH888541
length1,1651,102
definitionDH888540|Mus musculus domesticus DNA, BAC clone: B6Ng01-070J06, 5' end.DH888541|Mus musculus domesticus DNA, BAC clone: B6Ng01-070J06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaatactgagat
tccacttcattccagtcagaatggctaagataaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattattggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggagtatccagcaatacctctcctgggc
atatatccagatgtcccaaccggtaagaaggacacatgctccactatgtt
catagcagccttatttataatagccagaagctggaaagaacccagatgcc
cctcaacagaggaatggatatagaaaatgtggtacatctacacaatggag
tactactcagctattaaaaaatgaatttatgaaattcctaggcaaatgga
tggacctggagggcatcatcctgagtgaggtaacacaatcacaaaggaac
tcacacaatatgtactcactgacaagtggatattagcccagaaacttagg
atacccaagatataagatacaatttgctaaacgcatgaaactcaagaaga
acgaagaccaaagtgtggacactttgccccttcttagaactgggaacaaa
acacccttggaaggagttacagagacgaaatttcgatttgtgacgaaatg
atggactatatagtgattgccatatccagggatccatcccataatcagct
tccaaatgctgacaccattgcatacactagcaagatttcactgaaaggac
ccagatatagctgtctcttgtgagactatgccggggcctagcaaacacag
aagtggatggtcacagtcagctattggatgggtcacatggcccccaatgg
aggagctagagaaagtacccaaggagctaaagggatctgcaaccctatag
gtggaacacaatatgactaacagtaccctggagttcttgtctctagctgc
atatgtatcaaagatggctagtcggcatcactggaaagagagccactgga
cttgcaaacttatatgcccagtacaggaacgccagggcaaatggggtgtg
gtggggtaagggata
gaattcagagatccgcttgccttagtctcctgggattcatagccactatg
cttcacgatctccatgccaagatccatgtcagaaacttgtatttcccagt
ctcaagatctagatcacaggtgaacttttcaattctggattgtaggtcat
tccagatatagtcaaggtgacaaccagtaatgaccactacatgtttcatt
tctgctttcagatttccatgtgggaataaacttcctagagttctcttctc
acccatctcttgaaaagttccaatctgataacttcctactttgctttcaa
ctcctatatctaaatcatatgtttcatctaaaccaagaacagcagagaag
agttgaatctgaaggcaagtggagttaggtgagcgggtggttctatccca
ctatagagaggggagtggaagacaaggagacagaacacctgaagacccat
gtcagggcattaaggacatccaacagttttcatggaccttttatgggaga
aaatagaatcatgtttctcaggccctagctactcctcagacaggtgcacc
aggaaggcagaagcagttctgcgtatgactgccacagtccagcccatgtt
gcccaacagctgggcttataggaccagtaaattttcagggaaaccaaggc
tcatcagagacacactccttctgtgaacactactacatgagtattttgat
tgttttttaaaaaaatttctaaaaatagtctctgctataactagtgacca
cttaatgaagaagaaaaggacagtggtgtttgtcaacttgcttattttaa
aagttagggatggatcaaggtctctaagggagaaggaaatgatataaatt
acttagaattattgagaaagaaaactgactaaaaagccaaggaaaagaaa
tttagcacaacaagcaaatttcacctttctgccatatgggattatgaaaa
aaatatgttttacaagtaagtataaatctccatagatatgtcttagaaac
ctgtctagatgcacatatgtcattggattttctggacagagagaaagaag
tcagcctccatgtactactaaggatgctgggcaagcagtggtctcagtag
ta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_117427498_117428612
seq2: B6Ng01-070J06.g_66_1167 (reverse)

seq1  TACTACTGAAGACCACTGCCTTGGCCCAGCATCCCTAAGTAGTACCATGG  50
      |||||||| ||||||||||  | ||||||||| ||| ||||||| |||||
seq2  TACTACTG-AGACCACTGC--TTGCCCAGCAT-CCTTAGTAGTA-CATGG  45

seq1  AGGCTGACTTCTTTCTCTCTGTCCCCAGAAAATCCAATGACAATATGTGC  100
      ||||||||||||||||||||||  ||||||||||||||||| ||||||||
seq2  AGGCTGACTTCTTTCTCTCTGT--CCAGAAAATCCAATGAC-ATATGTGC  92

seq1  ATCTAGACAGGTTTCTTAAGACATTATCTTATGGAAGATTTATACTTACT  150
      ||||||||||||||| ||||||| |||| ||||| |||||||||||||||
seq2  ATCTAGACAGGTTTC-TAAGACA-TATC-TATGG-AGATTTATACTTACT  138

seq1  TGTAAAACATATTTTTTTCATAAATCCCATATGGCAGAAAGGTGAAATTT  200
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGTAAAACATATTTTTTTCAT-AATCCCATATGGCAGAAAGGTGAAATTT  187

seq1  GCTTGTTGTGCTAAATTTCTTTTCCTTGGCTTTTTAGTCAGTTTTCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTGTGCTAAATTTCTTTTCCTTGGCTTTTTAGTCAGTTTTCTTTC  237

seq1  TCAATAATTCTAAGTAATTTATATCATTTCCTTCTCCCTTAGAGACCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAATTCTAAGTAATTTATATCATTTCCTTCTCCCTTAGAGACCTTG  287

seq1  ATCCATCCCTAACTTTTAAAATAAGCAAGTTGACAAACACCACTGTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCCCTAACTTTTAAAATAAGCAAGTTGACAAACACCACTGTCCTT  337

seq1  TTCTTCTTCATTAAGTGGTCACTAGTTATAGCAGAGACTATTTTTAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCATTAAGTGGTCACTAGTTATAGCAGAGACTATTTTTAGAAA  387

seq1  TTTTTTTAAAAAACAATCAAAATACTCATGTAGTAGTGTTCACAGAAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAAAAAACAATCAAAATACTCATGTAGTAGTGTTCACAGAAGGA  437

seq1  GTGTGTCTCTGATGAGCCTTGGTTTCCCTGAAAATTTACTGGTCCTATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCTCTGATGAGCCTTGGTTTCCCTGAAAATTTACTGGTCCTATAA  487

seq1  GCCCAGCTGTTGGGCAACATGGGCTGGACTGTGGCAGTCATACGCAGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGCTGTTGGGCAACATGGGCTGGACTGTGGCAGTCATACGCAGAAC  537

seq1  TGCTTCTGCCTTCCTGGTGCACCTGTCTGAGGAGTAGCTAGGGCCTGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTGCCTTCCTGGTGCACCTGTCTGAGGAGTAGCTAGGGCCTGAGA  587

seq1  AACATGATTCTATTTTCTCCCATAAAAGGTCCATGAAAACTGTTGGATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGATTCTATTTTCTCCCATAAAAGGTCCATGAAAACTGTTGGATGT  637

seq1  CCTTAATGCCCTGACATGGGTCTTCAGGTGTTCTGTCTCCTTGTCTTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATGCCCTGACATGGGTCTTCAGGTGTTCTGTCTCCTTGTCTTCCA  687

seq1  CTCCCCTCTCTATAGTGGGATAGAACCACCCGCTCACCTAACTCCACTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTCTCTATAGTGGGATAGAACCACCCGCTCACCTAACTCCACTTG  737

seq1  CCTTCAGATTCAACTCTTCTCTGCTGTTCTTGGTTTAGATGAAACATATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGATTCAACTCTTCTCTGCTGTTCTTGGTTTAGATGAAACATATG  787

seq1  ATTTAGATATAGGAGTTGAAAGCAAAGTAGGAAGTTATCAGATTGGAACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGATATAGGAGTTGAAAGCAAAGTAGGAAGTTATCAGATTGGAACT  837

seq1  TTTCAAGAGATGGGTGAGAAGAGAACTCTAGGAAGTTTATTCCCACATGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGAGATGGGTGAGAAGAGAACTCTAGGAAGTTTATTCCCACATGG  887

seq1  AAATCTGAAAGCAGAAATGAAACATGTAGTGGTCATTACTGGTTGTCACC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGAAAGCAGAAATGAAACATGTAGTGGTCATTACTGGTTGTCACC  937

seq1  TTGACTATATCTGGAATGACCTACAATCCAGAATTGAAAAGTTCACCTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTATATCTGGAATGACCTACAATCCAGAATTGAAAAGTTCACCTGT  987

seq1  GATCTAGATCTTGAGACTGGGAAATACAAGTTTCTGACATGGATCTTGGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAGATCTTGAGACTGGGAAATACAAGTTTCTGACATGGATCTTGGC  1037

seq1  ATGGAGATCGTGAAGCATAGTGGCTATGAATCCCAGGAGACTAAGGCAAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGATCGTGAAGCATAGTGGCTATGAATCCCAGGAGACTAAGGCAAG  1087

seq1  CGGATCTCTGAATTC  1115
      |||||||||||||||
seq2  CGGATCTCTGAATTC  1102