BAC Information

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BAC

Clone NameB6Ng01-071A07
Chromosome2 (Build37)
Map Location 42,764,650 - 42,900,815
singlet/doubletdoublet
Overlap genenone
Upstream geneLrp1b, LOC625094
Downstream geneLOC100041228, LOC100041245, Kynu, Arhgap15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071A07.bB6Ng01-071A07.g
ACCDH888838DH888839
length1,1831,224
definitionDH888838|Mus musculus domesticus DNA, BAC clone: B6Ng01-071A07, 5' end.DH888839|Mus musculus domesticus DNA, BAC clone: B6Ng01-071A07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(42,899,602 - 42,900,815)(42,764,650 - 42,765,899)
sequence
gaattcactgtaattttagtttgtaatattgtatctgactatgtttcctt
cttagtaattttttgagattacattcatgtatctgtttatatcattagta
tgaagaattagtattaaattatatacctatagcattctcttttatttttg
gggggcgaagttgtgttttgttttgttttgtttttgttttttgagacagg
atttctctgtatagcactggctgtcctggaactcactctggagaccaggc
tggcctcaaactctgaaattcgcctgcctctgcctcccaagtgctgggat
taaaggcatgtgccaccacgcccggtgctatagcattctctatagcattg
atatatctcaaaaaatattcatctaaagatctgaatttccatttttaaaa
tttgaagctacaataaataaaatgactagctactgacactggatatgcct
gtcttcttttagcttagccattccagtatttatatagtggtttaagggta
tagttacctgatgtttgatgttgttaaattcatttcagatttcaagtgat
tagttgtgtatttctttattattaaatattttatttattatgaaattatt
attaaatctattattaaatattttctgaggattcccaggattgtattatt
ttagttggttttattgtcctattatttttaataccatatagactcaagcc
attttttccaatatacatattgtgaatattttctcctagtttgtggctta
tattttcattttcataatagcatttatcaaacaagattaaagataatatt
atagtaggctttgtatcatttattttaagtatgtataaaagcttaacttt
ccacaaagttgaaaatgtctatttatttgacattttatagttctacatgc
agacctatgactagtttagagttaaatatagtgcattgaaagataaagtc
atttagtgctgcttgctttcttgctgcatgcatactacttgttttgaagc
aaacaaggtctcatgtttgtcagtcattttaatttgatatatatctatta
ttgaaaggatgaccttgaacttccaatcatctgcctcatggcttcagtga
cgaattgcaacagtatcatcctaggatttaatgtactggcaggttatgct
tcaggattaggaataccacacactatgtatgtg
gaattctcacttgatacttaccagctacatgacattagaacagcttttgt
cttcacattgagaataaaagaacctacttcattaaaattgacttacatgc
aaatgagatgtgtgtaagatatttctcccagtgtctagtaagccactgat
ggtattttgtaacactgcccaatcttgctgttcttatcattattaaacct
tgagtctatcatcattagaaaaataaagattctcctgtgcctctctgctc
aacatcccagagtgctcttttcactattccaaagggtttagtaagttatg
taaagtcaaagttgcctaacaaatttcagctagagtcccattctggttaa
agactgtgttttcaagaataattgttctacattggcacagccaacttcaa
aaattcaaccataaaaatgctaatgtctcttttctgtagaatatataccc
tacttgggtatcaggataaagcaagtccctttcttttcttaccacccaaa
cttattatcaagtttctcattctaactcagttttaaactttataagataa
tgagaaattcactgatttgtaactgttcccccatcatccatttaagttag
aacccaaggagaaggcaggactccttctgcagaaattatgccattggata
ggaaatcatattaactatatatatttcccagccttataattttcttgtgc
tactaagttttgactatcaacttgatatctcaaaaaggggtctttaggaa
ttaattgaatcaagaagccctacagcatttctgtgaaagatgatcttaat
ttttcaattgctataaaaaattgggaccactatgagcagcattatccctt
agacctgagcagtgtaagaaagaaaatataaacaaccaagaactcatgtg
cttatttgcttttctctgttgtttatatgggacttaaagctcctaccttg
acttcccctatacccccacaccctgcaaatagattgtaaaagaatttcag
caaaataatcccatttatcctacatggatttgtctgtctgtctgtctgtc
tgtctgtctattaattcattgtccagggtgtttactacaatacgagatga
actggaatacatctggacgactgacaaattgaaccttacttataaacaat
ttgcttaacaaatccgcttcgatcagtagccacaactgtccttatctctg
tcaaatagcaatgcttacttttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_42899602_42900815
seq2: B6Ng01-071A07.b_47_1229 (reverse)

seq1  CACATACATATATGTGTGTGTGTGTGTGTATTTCCCCTAACTCCTGAAGC  50
      ||||||||||         ||||||| |||||   ||||| |||||||||
seq2  CACATACATA---------GTGTGTG-GTATT---CCTAA-TCCTGAAGC  36

seq1  AGTACACTTGCAGTACATTAAAATCTAGGGATGATACTTGTTTGCAATTC  100
      | ||  ||  ||||||||||||  ||| ||||||||||   |||||||||
seq2  A-TAACCTGCCAGTACATTAAATCCTA-GGATGATACT--GTTGCAATTC  82

seq1  TGTCACTGAAGCCATGGAGGCAGATGGATTAGAAGTTCAAGGTCATCCTT  150
       |||||||||||||| ||||||||| |||| |||||||||||||||||||
seq2  -GTCACTGAAGCCAT-GAGGCAGAT-GATTGGAAGTTCAAGGTCATCCTT  129

seq1  TCATAAATAGATATATATCAAATTTGAAAATGACCTTGAC-AACATGAGA  199
      |||  |||||||||||||||||||  ||||||||  |||| |||||||||
seq2  TCAATAATAGATATATATCAAATT--AAAATGAC--TGACAAACATGAGA  175

seq1  CCTTGTTTTGCTTCAAAACAAGTAAGTATGCATGCAAGCAAGAAAAGCAA  249
      ||||| ||||||||||||||||| ||||||||||| |||||| |||||||
seq2  CCTTG-TTTGCTTCAAAACAAGT-AGTATGCATGC-AGCAAG-AAAGCAA  221

seq1  GCAGCAACTAAATGAACTTTTATCTTTCAATGCACTATATTTAACTCTAA  299
      ||||| |||||||||   ||||||||||||||||||||||||||||||||
seq2  GCAGC-ACTAAATGA--CTTTATCTTTCAATGCACTATATTTAACTCTAA  268

seq1  ACTAGTCATAGGTCTGCATGTAGAACTATAAAATGTCAAATAAATAGACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTCATAGGTCTGCATGTAGAACTATAAAATGTCAAATAAATAGACA  318

seq1  TTTTCAACTTTGTGGAAAGTTAAGCTTTTATACATACTTAAAATAAATGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAACTTTGTGGAAAGTTAAGCTTTTATACATACTTAAAATAAATGA  368

seq1  TACAAAGCCTACTATAATATTATCTTTAATCTTGTTTGATAAATGCTATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGCCTACTATAATATTATCTTTAATCTTGTTTGATAAATGCTATT  418

seq1  ATGAAAATGAAAATATAAGCCACAAACTAGGAGAAAATATTCACAATATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATGAAAATATAAGCCACAAACTAGGAGAAAATATTCACAATATG  468

seq1  TATATTGGAAAAAATGGCTTGAGTCTATATGGTATTAAAAATAATAGGAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGGAAAAAATGGCTTGAGTCTATATGGTATTAAAAATAATAGGAC  518

seq1  AATAAAACCAACTAAAATAATACAATCCTGGGAATCCTCAGAAAATATTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACCAACTAAAATAATACAATCCTGGGAATCCTCAGAAAATATTT  568

seq1  AATAATAGATTTAATAATAATTTCATAATAAATAAAATATTTAATAATAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAGATTTAATAATAATTTCATAATAAATAAAATATTTAATAATAA  618

seq1  AGAAATACACAACTAATCACTTGAAATCTGAAATGAATTTAACAACATCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATACACAACTAATCACTTGAAATCTGAAATGAATTTAACAACATCA  668

seq1  AACATCAGGTAACTATACCCTTAAACCACTATATAAATACTGGAATGGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCAGGTAACTATACCCTTAAACCACTATATAAATACTGGAATGGCT  718

seq1  AAGCTAAAAGAAGACAGGCATATCCAGTGTCAGTAGCTAGTCATTTTATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAAAAGAAGACAGGCATATCCAGTGTCAGTAGCTAGTCATTTTATT  768

seq1  TATTGTAGCTTCAAATTTTAAAAATGGAAATTCAGATCTTTAGATGAATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTAGCTTCAAATTTTAAAAATGGAAATTCAGATCTTTAGATGAATA  818

seq1  TTTTTTGAGATATATCAATGCTATAGAGAATGCTATAGCACCGGGCGTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGAGATATATCAATGCTATAGAGAATGCTATAGCACCGGGCGTGG  868

seq1  TGGCACATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCGAATTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCGAATTT  918

seq1  CAGAGTTTGAGGCCAGCCTGGTCTCCAGAGTGAGTTCCAGGACAGCCAGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTTGAGGCCAGCCTGGTCTCCAGAGTGAGTTCCAGGACAGCCAGT  968

seq1  GCTATACAGAGAAATCCTGTCTCAAAAAACAAAAACAAAACAAAACAAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATACAGAGAAATCCTGTCTCAAAAAACAAAAACAAAACAAAACAAAA  1018

seq1  CACAACTTCGCCCCCCAAAAATAAAAGAGAATGCTATAGGTATATAATTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTTCGCCCCCCAAAAATAAAAGAGAATGCTATAGGTATATAATTT  1068

seq1  AATACTAATTCTTCATACTAATGATATAAACAGATACATGAATGTAATCT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAATTCTTCATACTAATGATATAAACAGATACATGAATGTAATCT  1118

seq1  CAAAAAATTACTAAGAAGGAAACATAGTCAGATACAATATTACAAACTAA  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAATTACTAAGAAGGAAACATAGTCAGATACAATATTACAAACTAA  1168

seq1  AATTACAGTGAATTC  1214
      |||||||||||||||
seq2  AATTACAGTGAATTC  1183

seq1: chr2_42764650_42765899
seq2: B6Ng01-071A07.g_66_1289

seq1  GAATTCTCACTTGATACTTACCAGCTACATGACATTAGAACAGCTTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTTGATACTTACCAGCTACATGACATTAGAACAGCTTTTGT  50

seq1  CTTCACATTGAGAATAAAAGAACCTACTTCATTAAAATTGACTTACATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACATTGAGAATAAAAGAACCTACTTCATTAAAATTGACTTACATGC  100

seq1  AAATGAGATGTGTGTAAGATATTTCTCCCAGTGTCTAGTAAGCCACTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGATGTGTGTAAGATATTTCTCCCAGTGTCTAGTAAGCCACTGAT  150

seq1  GGTATTTTGTAACACTGCCCAATCTTGCTGTTCTTATCATTATTAAACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTTGTAACACTGCCCAATCTTGCTGTTCTTATCATTATTAAACCT  200

seq1  TGAGTCTATCATCATTAGAAAAATAAAGATTCTCCTGTGCCTCTCTGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTATCATCATTAGAAAAATAAAGATTCTCCTGTGCCTCTCTGCTC  250

seq1  AACATCCCAGAGTGCTCTTTTCACTATTCCAAAGGGTTTAGTAAGTTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCCAGAGTGCTCTTTTCACTATTCCAAAGGGTTTAGTAAGTTATG  300

seq1  TAAAGTCAAAGTTGCCTAACAAATTTCAGCTAGAGTCCCATTCTGGTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTCAAAGTTGCCTAACAAATTTCAGCTAGAGTCCCATTCTGGTTAA  350

seq1  AGACTGTGTTTTCAAGAATAATTGTTCTACATTGGCACAGCCAACTTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTGTTTTCAAGAATAATTGTTCTACATTGGCACAGCCAACTTCAA  400

seq1  AAATTCAACCATAAAAATGCTAATGTCTCTTTTCTGTAGAATATATACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAACCATAAAAATGCTAATGTCTCTTTTCTGTAGAATATATACCC  450

seq1  TACTTGGGTATCAGGATAAAGCAAGTCCCTTTCTTTTCTTACCACCCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGGTATCAGGATAAAGCAAGTCCCTTTCTTTTCTTACCACCCAAA  500

seq1  CTTATTATCAAGTTTCTCATTCTAACTCAGTTTTAAACTTTATAAGATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTATCAAGTTTCTCATTCTAACTCAGTTTTAAACTTTATAAGATAA  550

seq1  TGAGAAATTCACTGATTTGTAACTGTTCCCCCATCATCCATTTAAGTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAATTCACTGATTTGTAACTGTTCCCCCATCATCCATTTAAGTTAG  600

seq1  AACCCAAGGAGAAGGCAGGACTCCTTCTGCAGAAATTATGCCATTGGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAAGGAGAAGGCAGGACTCCTTCTGCAGAAATTATGCCATTGGATA  650

seq1  GGAAATCATATTAACTATATATATTTCCCAGCCTTATAATTTTCTTGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCATATTAACTATATATATTTCCCAGCCTTATAATTTTCTTGTGC  700

seq1  TACTAAGTTTTGACTATCAACTTGATATCTCAAAAAGGGGTCTTTAGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGTTTTGACTATCAACTTGATATCTCAAAAAGGGGTCTTTAGGAA  750

seq1  TTAATTGAATCAAGAAGCCCTACAGCATTTCTGTGAAAGATGATCTTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGAATCAAGAAGCCCTACAGCATTTCTGTGAAAGATGATCTTAAT  800

seq1  TTTTCAATTGCTATAAAAAATTGGGACCACTATGAGCAGCATTATCCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAATTGCTATAAAAAATTGGGACCACTATGAGCAGCATTATCCCTT  850

seq1  AGACCTGAGCAGTGTAAGAAAGAAAATATAAACAACCAAGAACTCATGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGAGCAGTGTAAGAAAGAAAATATAAACAACCAAGAACTCATGTG  900

seq1  CTTATTTGCTTTTCTCTGTTGTTTATATGGGACTTAAAGCTCCTACCTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTGCTTTTCTCTGTTGTTTATATGGGACTTAAAGCTCCTACCTTG  950

seq1  ACTTCCCCTATACCCCCACACCCTGCAAATAGATTGTAAAAGAATTTCAA  1000
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACTTCCCCTATACCCCCACACCCTGCAAATAGATTGTAAAAGAATTTC-A  999

seq1  GCAAAATAATCCCATTTATCCTACATGGATTTGTCTGTCTGTCTGTCTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATAATCCCATTTATCCTACATGGATTTGTCTGTCTGTCTGTCTGT  1049

seq1  CTGTCTGTCTATTAATTCATTGTCCAGGGTGTTTACTACAATAACAGAGA  1100
      |||||||||||||||||||||||||||||||||||||||||||   ||||
seq2  CTGTCTGTCTATTAATTCATTGTCCAGGGTGTTTACTACAATA--CGAGA  1097

seq1  TGAAACTGGAATACATCTGGACAGACTGACAAGTATGAACACTAACTTTA  1150
      || ||||||||||||||||||| ||||||||| | ||||| || || |||
seq2  TG-AACTGGAATACATCTGGAC-GACTGACAAAT-TGAAC-CTTAC-TTA  1142

seq1  TAAACAAATTTGCTTATACAAATTCTGCTTTCAGATCCACTTTAAAGCCA  1200
      ||||| |||||||||| ||||| || ||||   ||| || |    |||| 
seq2  TAAAC-AATTTGCTTA-ACAAA-TCCGCTT--CGAT-CAGT----AGCC-  1181

seq1  ACAAAACTTGTTCCTTTATCTTCTGTCAAATATGCAATGCTTACTTTTGC  1250
      ||||    |||  | ||||| ||||||||||| |||||||||||||||||
seq2  ACAA---CTGT--CCTTATC-TCTGTCAAATA-GCAATGCTTACTTTTGC  1224