BAC Information

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BAC

Clone NameB6Ng01-072G12
Chromosome2 (Build37)
Map Location 86,851,396 - 86,852,552
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1
Downstream geneOlfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072G12.bB6Ng01-072G12.g
ACCDH889834DH889835
length1,1521,245
definitionDH889834|Mus musculus domesticus DNA, BAC clone: B6Ng01-072G12, 5' end.DH889835|Mus musculus domesticus DNA, BAC clone: B6Ng01-072G12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactctttgatgttttctgtatagttttgctcaaaggagcatgg
atttagatttgtattcccaagaaatgcataatttatagaaaataaaagat
aaattgtcagatactgttgtatataagaattagtattttcaaatgttaaa
aaaaaaagtcattcagggtcacaaaaaaaagaaattttactccaaatgag
atttctgaacatgctagaatttttctcttaatcaagaggcttggaaaaac
aaaccacctcaaagcagaaactgcagtaaggcagagggcttctgatctac
ttcctattggcaaaggtctatgttcacagtctttcaatactggctagctt
aaaatgatcattgcaaaggaaatgaaggaaagcaaagagtgcacagctac
ttaaaattactagaaggtattgggcctttgtgtacataaaatatttacaa
tgagtgtgttgagatgaggggttagaacatttgaattattgtcttacact
ttacaatgtgaggaaaaagattttaacactaatttgataatgtttcaaaa
tgaacatttaatattcattttagacatggcatcataaaatatgacatttc
acttcatcatccttctgctcccttttaactaaaagtagatttaaagttga
aatgaaattgaagttattacaacatataatgtctacctagtaaatttata
actcatagttgctgttattattattattattattattattattattatta
ttattattattattaatttctctttcatgactataggggaaaacttaatt
ttcacattacaaagctgagaaatgtggttttaaaataaaatcaattgcaa
aggacaatgacagtctatatatatttaacataggccatattaattctttg
tcaatgtaataaattaactgagtgattgtttttactttatgtttatgagt
gttttggctgcatgcatgtctgtgcattatatacttgaaggtgtatttaa
gctcagacagaggtagagtcagatttctggttattttagtaacgtcatta
tgagctgcagatatgtacctctgattgaacacaatatcctctagaagaat
agtcagtgtcttaactccgagccttgttctttatcacctaataatctaaa
ta
gaattctattgagtaattttggctgaatattcaaaagggaaattggtgtg
aagttccctttctttgttgggtctttgtgtggtttaggtatcagagtaaa
aatggccaccttcctgaaagcaatctacagatttaatgcaagccccatca
aaattccaactcaattcttcacagagttagaaagagcaatttgcaaattc
atctgaataacaaaaaaacctaggatagggaaaactattctcaacaataa
aaggaattctgggggaatcactatccctgaactcaagctctactacagag
caattgtgataaaaactgcatggtattggtagagtgacagggaggtagat
caatggaatagaactaaagactaagaaatgaacccagacacctatggtca
cttgatctttgagataggaactaaaaatcatgcagtggaataaagacagc
attttcaataaatggtgctggtggtgattagcatgtagaagaatgcaaat
gatccattcttacccccttatacaaagctcaagtccaagttgatcaagat
cctgcacataaaacaagatacactcaaactaatagaaaagttaagtgggg
aagagcctcaagcacatgaacacaggggcaatttccctaaacagaacacc
aatagcttatgctctaagatcaagaattgacaaatgggacctcataaaat
tgaaaagcttctgtaagacaaagggcatagtaagtaggataaaacgacaa
ccaacggattgggaaaagatctttaccaaccctacatataatagagggct
aataaccaatatatacaaagaactcaagaaattagactccaacaaaacag
ataacactattaaaaatggggtccagagctaaacaaagtattcttaactg
aggaatactgaatggatgagaagcacctaaagaaatgttcacatcattag
tcaccagggaaactgaaatcaaaacagccctgaagattccactcacacag
tcaggatggctaggatcaaaactcaaggtgacaacaatgtgggggaggtg
tgggagaaagacggacccccctcaatgctgggtgggattgcaagcttgta
caaccactctggaaactgtttggtggtctccagaagattggaccgtgagt
ctacctgggaaacaacttaccttctagccatacctaaattggtcacagtc
gaatgaccatggcgcctcttatatctatagcagtgccttattata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86851396_86852552
seq2: B6Ng01-072G12.b_48_1199

seq1  GAATTCAACTCTTTGATGTTTTCTGTATAGTTTTGCTCAAAGGAGCATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTCTTTGATGTTTTCTGTATAGTTTTGCTCAAAGGAGCATGG  50

seq1  ATTTAGATTTGTATTCCCAAGAAATGCATAATTTATAGAAAATAAAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGATTTGTATTCCCAAGAAATGCATAATTTATAGAAAATAAAAGAT  100

seq1  AAATTGTCAGATACTGTTGTATATAAGAATTAGTATTTTCAAATGTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTCAGATACTGTTGTATATAAGAATTAGTATTTTCAAATGTTAAA  150

seq1  AAAAAAAGTCATTCAGGGTCACAAAAAAAAGAAATTTTACTCCAAATGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGTCATTCAGGGTCACAAAAAAAAGAAATTTTACTCCAAATGAG  200

seq1  ATTTCTGAACATGCTAGAATTTTTCTCTTAATCAAGAGGCTTGGAAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAACATGCTAGAATTTTTCTCTTAATCAAGAGGCTTGGAAAAAC  250

seq1  AAACCACCTCAAAGCAGAAACTGCAGTAAGGCAGAGGGCTTCTGATCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACCTCAAAGCAGAAACTGCAGTAAGGCAGAGGGCTTCTGATCTAC  300

seq1  TTCCTATTGGCAAAGGTCTATGTTCACAGTCTTTCAATACTGGCTAGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATTGGCAAAGGTCTATGTTCACAGTCTTTCAATACTGGCTAGCTT  350

seq1  AAAATGATCATTGCAAAGGAAATGAAGGAAAGCAAAGAGTGCACAGCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGATCATTGCAAAGGAAATGAAGGAAAGCAAAGAGTGCACAGCTAC  400

seq1  TTAAAATTACTAGAAGGTATTGGGCCTTTGTGTACATAAAATATTTACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTACTAGAAGGTATTGGGCCTTTGTGTACATAAAATATTTACAA  450

seq1  TGAGTGTGTTGAGATGAGGGGTTAGAACATTTGAATTATTGTCTTACACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTGTTGAGATGAGGGGTTAGAACATTTGAATTATTGTCTTACACT  500

seq1  TTACAATGTGAGGAAAAAGATTTTAACACTAATTTGATAATGTTTCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATGTGAGGAAAAAGATTTTAACACTAATTTGATAATGTTTCAAAA  550

seq1  TGAACATTTAATATTCATTTTAGACATGGCATCATAAAATATGACATTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATTTAATATTCATTTTAGACATGGCATCATAAAATATGACATTTC  600

seq1  ACTTCATCATCCTTCTGCTCCCTTTTAACTAAAAGTAGATTTAAAGTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATCATCCTTCTGCTCCCTTTTAACTAAAAGTAGATTTAAAGTTGA  650

seq1  AATGAAATTGAAGTTATTACAACATATAATGTCTACCTAGTAAATTTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATTGAAGTTATTACAACATATAATGTCTACCTAGTAAATTTATA  700

seq1  ACTCATAGTTGCTG---TTATTATTATTATTATTATTATTATTATTATTA  747
      ||||||||||||||   |||||||||||||||||||||||||||||||||
seq2  ACTCATAGTTGCTGTTATTATTATTATTATTATTATTATTATTATTATTA  750

seq1  TTATTATTATTATTAATTTCTCTTTCATGACTATAGGGGAAAACTTAATT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTATTATTAATTTCTCTTTCATGACTATAGGGGAAAACTTAATT  800

seq1  TTCACATTACAAAGCTGAGAAATGTGGTTTTAAAATAAAATCAATTGCAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATTACAAAGCTGAGAAATGTGGTTTTAAAATAAAATCAATTGCAA  850

seq1  AGGACAATGACAGTCTATATATATTTAACATAGGCCATATTAATTCTTTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAATGACAGTCTATATATATTTAACATAGGCCATATTAATTCTTTG  900

seq1  TCAATGTAATAAATTAACTGAGTGATTGTTTTTACTTTATGTTTATGAGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTAATAAATTAACTGAGTGATTGTTTTTACTTTATGTTTATGAGT  950

seq1  GTTTTGGCTGCATGCATGTCTGTGCATTATATACTTGAAGGGTGTATTTA  997
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTTTTGGCTGCATGCATGTCTGTGCATTATATACTTGAA-GGTGTATTTA  999

seq1  AGCTCAGACAGAGGTAGGAGTCAGATTTCTGGTTATTTTAGTAACCGTCA  1047
      |||||||||||||||| ||||||||||||||||||||||||||| |||||
seq2  AGCTCAGACAGAGGTA-GAGTCAGATTTCTGGTTATTTTAGTAA-CGTCA  1047

seq1  TTATGAGCTGCCAGATATGTA-CTCTGAATTGAACAC-ATATCCTCTAGA  1095
      |||||||||| |||||||||| ||||| ||||||||| ||||||||||||
seq2  TTATGAGCTG-CAGATATGTACCTCTG-ATTGAACACAATATCCTCTAGA  1095

seq1  AGAATAGTCAGTGTCCTTAACCTCCGAGCTATG-TCTTTATCACCTTAAT  1144
      |||||||||||||| ||||| ||||||||  || ||||||||||| ||||
seq2  AGAATAGTCAGTGT-CTTAA-CTCCGAGCCTTGTTCTTTATCACC-TAAT  1142

seq1  TAAAATCTAAATA  1157
         ||||||||||
seq2  ---AATCTAAATA  1152