BAC Information

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BAC

Clone NameB6Ng01-074C18
Chromosome2 (Build37)
Map Location 158,146,419 - 158,147,645
singlet/doubletsinglet
Overlap geneLbp
Upstream geneRpn2, Ghrh, LOC100043678, Manbal, Src, Blcap, Nnat, Ctnnbl1, LOC100043681, Gm691, 2610036D13Rik, 2610304G08Rik, Tgm2, D630003M21Rik, Bpi
Downstream gene9430008C03Rik, A930034L06Rik, B230339M05Rik, LOC628935, BC054059, LOC545481, Slc32a1, Actr5, Ppp1r16b, 2310007D09Rik, Dhx35, LOC100043891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074C18.bB6Ng01-074C18.g
ACCDH891096DH891097
length1,230771
definitionDH891096|Mus musculus domesticus DNA, BAC clone: B6Ng01-074C18, 5' end.DH891097|Mus musculus domesticus DNA, BAC clone: B6Ng01-074C18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctacatgtctattaaaataatttaatgggggctggggggatggc
tcagtggttaagagcactggctgctcttccagaggttctgagttcaagtc
ccagcatccacaaggtggttcacaaccatctaaaaccataatcctgtggg
atgtaatgttttcttctggtatgcaactgtgcatacagacaaaacaccca
tattaatttaaaaaattttaattaataaatattaaatattttaaaaatta
atggatggggcacagtcacacaacagagaaaagaaataaagaacaaacaa
aataaatgacaactatgaagacacgagatttgtttttgttttttgttttt
aatcacaaatctgtctgggagctgccctgacgccaaagtgaaaagggtac
ctaatttagtgatttgcaatgaaagaaaggaacatgtcttcctcagacat
accttgaggtactagatgccagtggaatttgcagtcaggaaagtgacttt
cactgtaaatcacattttataatccccttggttcttttaggctttctagg
gttcaaaaagttctttttatttttttatagctcctcttaagagttgaagt
ctgtaagcaatgtcaagatggtgggaagacagaatgaccaccctggcaaa
gagtgggggctctctgatgacagatgagcaacattgtcctcgaggtggtt
tctcccccattccactacaacctctcctgtctcccacctgctttacgggg
cgctctatgcgatgggtccctggagtaaggacaaaaaaacccagcccaaa
gtcacaccgacgagctggaagcttgtctcaaacaggagaactctgaagga
tgctcacaggttcacagctacaccccatccccaggagattcacacgctct
aggagacatgggtagccaaggcaactgggacccataggagaaaactagtc
tttgaccgtcctccaatgtcatggctcatgctgcttgtcaactgacagca
ttctagagtcactaaagaagacaagcccttgcacatctccggtgtgggat
ttcccagagtaagttaactgctggtggggagccagccaccttgtggcacc
accatttctgttgctgaggtcccggctggatgggaatggccatgaccatc
attctctgctttcgtaacatgacctagggtaccagctgtcccagtctccg
gccatgatagtggacctgttatttttgaac
gaattcctcattcaccctgaaataaaacgcatttgcttatataaagaaac
atgagcaagctaagatcgtctcagagagctgcttcattagaaggccttca
cctaagagctgtgacacacttgctccccgctggatcagatcctgttcaga
tggggcggctctggctgtacagtgatgctcactccccaaagggagatgcc
ctccaccccaccccaccccaccctatttctgacttcctctcctagcagca
cccaggtacctcaaacgaggacattgggaaccacagcattcatttcagac
ccccttctcctcccagctgtgagctgctgtcccaaggaaacaggaattgt
tgcaggaatttccctgtccaatcacattaggggagtgggaggcttgggac
tatacaggagaagggaggaggcggagggaggagttgagaagacagagaga
gaggtctgaggagagggagaaccagaatggaggctgacatggtgttatca
aaagggtagaataattgtgttaaagctttatcattatcatttggctctga
aattattgtattggcaacttataaattgcgttattattgatacataaata
tgattggctagttaagcattaagagtctttgattctactgggtaattagg
tgttgagatggttaaccaggggcgaatggagcaatgcatgaaaacaagag
gaacttggggggccctgttcaagagaatgcctggcgggagccctggtaag
ttggcgggcctagagactgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_158146419_158147645
seq2: B6Ng01-074C18.b_42_1271

seq1  GAATTCCTACATGTCTATTAAAATAATTTAATGGGGGCTGGGGGGATGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACATGTCTATTAAAATAATTTAATGGGGGCTGGGGGGATGGC  50

seq1  TCAGTGGTTAAGAGCACTGGCTGCTCTTCCAGAGGTTCTGAGTTCAAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGTTAAGAGCACTGGCTGCTCTTCCAGAGGTTCTGAGTTCAAGTC  100

seq1  CCAGCATCCACAAGGTGGTTCACAACCATCTAAAACCATAATCCTGTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATCCACAAGGTGGTTCACAACCATCTAAAACCATAATCCTGTGGG  150

seq1  ATGTAATGTTTTCTTCTGGTATGCAACTGTGCATACAGACAAAACACCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATGTTTTCTTCTGGTATGCAACTGTGCATACAGACAAAACACCCA  200

seq1  TATTAATTTAAAAAATTTTAATTAATAAATATTAAATATTTTAAAAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATTTAAAAAATTTTAATTAATAAATATTAAATATTTTAAAAATTA  250

seq1  ATGGATGGGGCACAGTCACACAACAGAGAAAAGAAATAAAGAACAAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGGGGCACAGTCACACAACAGAGAAAAGAAATAAAGAACAAACAA  300

seq1  AATAAATGACAACTATGAAGACACGAGATTTGTTTTTGTTTTTTGTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATGACAACTATGAAGACACGAGATTTGTTTTTGTTTTTTGTTTTT  350

seq1  AATCACAAATCTGTCTGGGAGCTGCCCTGACGCCAAAGTGAAAAGGGTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAAATCTGTCTGGGAGCTGCCCTGACGCCAAAGTGAAAAGGGTAC  400

seq1  CTAATTTAGTGATTTGCAATGAAAGAAAGGAACATGTCTTCCTCAGACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTAGTGATTTGCAATGAAAGAAAGGAACATGTCTTCCTCAGACAT  450

seq1  ACCTTGAGGTACTAGATGCCAGTGGAATTTGCAGTCAGGAAAGTGACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGAGGTACTAGATGCCAGTGGAATTTGCAGTCAGGAAAGTGACTTT  500

seq1  CACTGTAAATCACATTTTATAATCCCCTTGGTTCTTTTAGGCTTTCTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTAAATCACATTTTATAATCCCCTTGGTTCTTTTAGGCTTTCTAGG  550

seq1  GTTCAAAAAGTTCTTTTTATTTTTTTATAGCTCCTCTTAAGAGTTGAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAAAAGTTCTTTTTATTTTTTTATAGCTCCTCTTAAGAGTTGAAGT  600

seq1  CTGTAAGCAATGTCAAGATGGTGGGAAGACAGAATGACCACCCTGGCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGCAATGTCAAGATGGTGGGAAGACAGAATGACCACCCTGGCAAA  650

seq1  GAGTGGGGGCTCTCTGATGACAGATGAGCAACATTGTCCTCGAGGTGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGGGCTCTCTGATGACAGATGAGCAACATTGTCCTCGAGGTGGTT  700

seq1  TCTCCCCCATTCCACTACAACCTCTCCTGTCTCCCACCTGCTTTACGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCCATTCCACTACAACCTCTCCTGTCTCCCACCTGCTTTACGGGG  750

seq1  CGCTCTATGCGATGGGTCCCTGGAGTAAGGACAAAAAAACCCAGCCCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCTATGCGATGGGTCCCTGGAGTAAGGACAAAAAAACCCAGCCCAAA  800

seq1  GTCACACCGACGAGCTGGAAGCTTGTCTCAAACAGGAGAACTCTGAAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACACCGACGAGCTGGAAGCTTGTCTCAAACAGGAGAACTCTGAAGGA  850

seq1  TGCTCACAGGTTCACAGCTACACCCCATCCCCAGGAGATTCACACGCTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCACAGGTTCACAGCTACACCCCATCCCCAGGAGATTCACACGCTCT  900

seq1  AGGAGACAT-GGTAGCCAAGGCAACT-GGACCCATAGGAAGAAACTAGTC  948
      ||||||||| |||||||||||||||| ||||||||||||  |||||||||
seq2  AGGAGACATGGGTAGCCAAGGCAACTGGGACCCATAGGAGAAAACTAGTC  950

seq1  -TTGACCGTCCTCCAATGTCATGGCTCATGCTGCTTGTCAACCTGACAGC  997
       |||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTTGACCGTCCTCCAATGTCATGGCTCATGCTGCTTGTCAA-CTGACAGC  999

seq1  A-TCTAGAGTCACTAAAGAAGACATAGCCC-TGCACATCTCC-GTGTGGG  1044
      | |||||||||||||||||||||| ||||| ||||||||||| |||||||
seq2  ATTCTAGAGTCACTAAAGAAGACA-AGCCCTTGCACATCTCCGGTGTGGG  1048

seq1  ATTTCCCAGAGTAGGTTAACTGC-GGTGGGAGCCCAGCCA-CTTGTGGGC  1092
      ||||||||||||| ||||||||| ||||||   ||||||| ||||| |||
seq2  ATTTCCCAGAGTAAGTTAACTGCTGGTGGGGAGCCAGCCACCTTGT-GGC  1097

seq1  AGCACCA-TTCTGTTGGCTGAGGTCCCGGCTGAATGGGAATGGGCCAAGG  1141
      | ||||| ||||||| |||||||||||||||| ||||||||||  | | |
seq2  ACCACCATTTCTGTT-GCTGAGGTCCCGGCTGGATGGGAATGG--CCATG  1144

seq1  ACCAATTCCATTCTCTGCTTCCTGACTATGGACGCAGGGTGACCAGCTGC  1191
      ||||    |||||||||||| |  |  || |||  ||||| |||||||| 
seq2  ACCA---TCATTCTCTGCTTTCGTAACAT-GACCTAGGGT-ACCAGCTGT  1189

seq1  CTCAAGCTCCGGCCATGA---TGGA-CTG-TATTTTTGAAC  1227
      | ||  ||||||||||||   |||| ||| |||||||||||
seq2  CCCAGTCTCCGGCCATGATAGTGGACCTGTTATTTTTGAAC  1230